RNA–Protein interactions for RNA: ENST00000489283.5

PLS3-207, Transcript of plastin 3, humanhuman

TSL 1 (best)

Gene PLS3, Length 926 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLS3-207ENST00000489283 HOXA13P31271 388 aaPredicted RBP16.3■□□□□ 0.2
PLS3-207ENST00000489283 CHMP4BP1P59074 171 aa16.3■□□□□ 0.2
PLS3-207ENST00000489283 PTPN11Q06124 597 aaPredicted RBP16.3■□□□□ 0.2
PLS3-207ENST00000489283 GRIN2CQ14957 1233 aa16.3■□□□□ 0.2
PLS3-207ENST00000489283 CATIPQ7Z7H3 387 aa16.3■□□□□ 0.2
PLS3-207ENST00000489283 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.3■□□□□ 0.2
PLS3-207ENST00000489283 VWCEQ96DN2 955 aa16.3■□□□□ 0.2
PLS3-207ENST00000489283 PDCD2LQ9BRP1 358 aa16.3■□□□□ 0.2
PLS3-207ENST00000489283 ZNF576Q9H609 170 aa16.3■□□□□ 0.2
PLS3-207ENST00000489283 DDX41Q9UJV9 622 aaKnown RBP16.3■□□□□ 0.2
PLS3-207ENST00000489283 MRVI1Q9Y6F6 885 aa16.3■□□□□ 0.2
PLS3-207ENST00000489283 UNC80Q8N2C7 3258 aa16.3■□□□□ 0.2
PLS3-207ENST00000489283 MYCLP12524 364 aaPredicted RBP16.29■□□□□ 0.2
PLS3-207ENST00000489283 PGM5Q15124 567 aa16.29■□□□□ 0.2
PLS3-207ENST00000489283 RPUSD2Q8IZ73 545 aaKnown RBP16.29■□□□□ 0.2
PLS3-207ENST00000489283 PIAS4Q8N2W9 510 aaPredicted RBP16.29■□□□□ 0.2
PLS3-207ENST00000489283 IL31RAQ8NI17 732 aa16.29■□□□□ 0.2
PLS3-207ENST00000489283 IGDCC4Q8TDY8 1250 aa16.29■□□□□ 0.2
PLS3-207ENST00000489283 LSG1Q9H089 658 aaKnown RBP16.29■□□□□ 0.2
PLS3-207ENST00000489283 LY9Q9HBG7 655 aa16.29■□□□□ 0.2
PLS3-207ENST00000489283 MAP3K20Q9NYL2 800 aaKnown RBP16.29■□□□□ 0.2
PLS3-207ENST00000489283 PNMA6FA0A0J9YX94 578 aa16.28■□□□□ 0.2
PLS3-207ENST00000489283 PFKMP08237 780 aa16.28■□□□□ 0.2
PLS3-207ENST00000489283 RAB30Q15771 203 aa16.28■□□□□ 0.2
PLS3-207ENST00000489283 ZNF654Q8IZM8 581 aa16.28■□□□□ 0.2
PLS3-207ENST00000489283 SAMD3Q8N6K7 520 aa16.28■□□□□ 0.2
PLS3-207ENST00000489283 PIBF1Q8WXW3 757 aa16.28■□□□□ 0.2
PLS3-207ENST00000489283 KAT2BQ92831 832 aa16.28■□□□□ 0.2
PLS3-207ENST00000489283 EMID1Q96A84 441 aaPredicted RBP16.28■□□□□ 0.2
PLS3-207ENST00000489283 MYL10Q9BUA6 226 aa16.28■□□□□ 0.2
PLS3-207ENST00000489283 TET1Q8NFU7 2136 aa16.27■□□□□ 0.2
PLS3-207ENST00000489283 ZBBXA8MT70 800 aa16.27■□□□□ 0.2
PLS3-207ENST00000489283 GCOM1H8Y6P7 765 aaPredicted RBP16.27■□□□□ 0.2
PLS3-207ENST00000489283 PITPNM1O00562 1244 aa16.27■□□□□ 0.2
PLS3-207ENST00000489283 RGS20O76081 388 aa16.27■□□□□ 0.2
PLS3-207ENST00000489283 DDAH1O94760 285 aa16.27■□□□□ 0.2
PLS3-207ENST00000489283 POLR2MP0CAP2 368 aa16.27■□□□□ 0.2
PLS3-207ENST00000489283 CASTP20810 708 aaKnown RBP16.27■□□□□ 0.2
PLS3-207ENST00000489283 TRAF1Q13077 416 aa16.27■□□□□ 0.2
PLS3-207ENST00000489283 CASC1Q6TDU7 716 aa16.27■□□□□ 0.2
PLS3-207ENST00000489283 DEFB128Q7Z7B8 93 aa16.27■□□□□ 0.2
PLS3-207ENST00000489283 FCHSD1Q86WN1 690 aa16.27■□□□□ 0.2
PLS3-207ENST00000489283 ESYT1Q9BSJ8 1104 aa16.27■□□□□ 0.2
PLS3-207ENST00000489283 MSRAQ9UJ68 235 aa16.27■□□□□ 0.2
PLS3-207ENST00000489283 NOD1Q9Y239 953 aa16.27■□□□□ 0.2
PLS3-207ENST00000489283 SLC27A2O14975 620 aa16.26■□□□□ 0.19
PLS3-207ENST00000489283 PRC1O43663 620 aa16.26■□□□□ 0.19
PLS3-207ENST00000489283 SORBS3O60504 671 aa16.26■□□□□ 0.19
PLS3-207ENST00000489283 ZNF286BP0CG31 522 aa16.26■□□□□ 0.19
PLS3-207ENST00000489283 LAMC2Q13753 1193 aa16.26■□□□□ 0.19
PLS3-207ENST00000489283 COL9A3Q14050 684 aaPredicted RBP16.26■□□□□ 0.19
PLS3-207ENST00000489283 PTGISQ16647 500 aa16.26■□□□□ 0.19
PLS3-207ENST00000489283 DGKDQ16760 1214 aa16.26■□□□□ 0.19
PLS3-207ENST00000489283 GDF6Q6KF10 455 aaPredicted RBP16.26■□□□□ 0.19
PLS3-207ENST00000489283 VSIG10LQ86VR7 867 aa16.26■□□□□ 0.19
PLS3-207ENST00000489283 SESTD1Q86VW0 696 aa16.26■□□□□ 0.19
PLS3-207ENST00000489283 SKAP1Q86WV1 359 aa16.26■□□□□ 0.19
PLS3-207ENST00000489283 DHX37Q8IY37 1157 aaKnown RBP16.26■□□□□ 0.19
PLS3-207ENST00000489283 PPTC7Q8NI37 304 aa16.26■□□□□ 0.19
PLS3-207ENST00000489283 CTCFLQ8NI51 663 aaPredicted RBP16.26■□□□□ 0.19
PLS3-207ENST00000489283 ZFP91Q96JP5 570 aaPredicted RBP16.26■□□□□ 0.19
PLS3-207ENST00000489283 NKX2-4Q9H2Z4 354 aa16.26■□□□□ 0.19
PLS3-207ENST00000489283 YBX2Q9Y2T7 364 aaKnown RBP16.26■□□□□ 0.19
PLS3-207ENST00000489283 SLC4A7Q9Y6M7 1214 aa16.26■□□□□ 0.19
PLS3-207ENST00000489283 FRMPD4Q14CM0 1322 aa16.25■□□□□ 0.19
PLS3-207ENST00000489283 SH2B2O14492 632 aaPredicted RBP16.25■□□□□ 0.19
PLS3-207ENST00000489283 F2P00734 622 aa16.25■□□□□ 0.19
PLS3-207ENST00000489283 IQCF3P0C7M6 154 aa16.25■□□□□ 0.19
PLS3-207ENST00000489283 UBA1P22314 1058 aaKnown RBP16.25■□□□□ 0.19
PLS3-207ENST00000489283 CCND2P30279 289 aa16.25■□□□□ 0.19
PLS3-207ENST00000489283 MCM5P33992 734 aa16.25■□□□□ 0.19
PLS3-207ENST00000489283 RFC2P35250 354 aa16.25■□□□□ 0.19
PLS3-207ENST00000489283 PSEN2P49810 448 aa16.25■□□□□ 0.19
PLS3-207ENST00000489283 RABGGTBP53611 331 aa16.25■□□□□ 0.19
PLS3-207ENST00000489283 BFSP2Q13515 415 aa16.25■□□□□ 0.19
PLS3-207ENST00000489283 RETREG2Q8NC44 543 aa16.25■□□□□ 0.19
PLS3-207ENST00000489283 CTAGE1Q96RT6 745 aa16.25■□□□□ 0.19
PLS3-207ENST00000489283 MAP3K14Q99558 947 aa16.25■□□□□ 0.19
PLS3-207ENST00000489283 MTA3Q9BTC8 594 aa16.25■□□□□ 0.19
PLS3-207ENST00000489283 KATNAL1Q9BW62 490 aa16.25■□□□□ 0.19
PLS3-207ENST00000489283 SPZ1Q9BXG8 430 aa16.25■□□□□ 0.19
PLS3-207ENST00000489283 GTF2IRD1Q9UHL9 959 aa16.25■□□□□ 0.19
PLS3-207ENST00000489283 GGPS1O95749 300 aa16.24■□□□□ 0.19
PLS3-207ENST00000489283 KIF5BP33176 963 aa16.24■□□□□ 0.19
PLS3-207ENST00000489283 MFSD10Q14728 455 aa16.24■□□□□ 0.19
PLS3-207ENST00000489283 CELF3Q5SZQ8 465 aaKnown RBP16.24■□□□□ 0.19
PLS3-207ENST00000489283 MYSM1Q5VVJ2 828 aa16.24■□□□□ 0.19
PLS3-207ENST00000489283 CREB3L3Q68CJ9 461 aa16.24■□□□□ 0.19
PLS3-207ENST00000489283 KCNV1Q6PIU1 500 aa16.24■□□□□ 0.19
PLS3-207ENST00000489283 NFXL1Q6ZNB6 911 aa16.24■□□□□ 0.19
PLS3-207ENST00000489283 CCDC155Q8N6L0 562 aa16.24■□□□□ 0.19
PLS3-207ENST00000489283 GPKOWQ92917 476 aaPredicted RBP eCLIP16.24■□□□□ 0.19
PLS3-207ENST00000489283 TMEM87BQ96K49 555 aa16.24■□□□□ 0.19
PLS3-207ENST00000489283 ALG1Q9BT22 464 aa16.24■□□□□ 0.19
PLS3-207ENST00000489283 PRDM12Q9H4Q4 367 aa16.24■□□□□ 0.19
PLS3-207ENST00000489283 ANO2Q9NQ90 1003 aa16.24■□□□□ 0.19
PLS3-207ENST00000489283 HDAC6Q9UBN7 1215 aa16.24■□□□□ 0.19
PLS3-207ENST00000489283 CCDC69A6NI79 296 aa16.23■□□□□ 0.19
PLS3-207ENST00000489283 HAS3O00219 553 aa16.23■□□□□ 0.19
PLS3-207ENST00000489283 PLEKHA8P1O95397 391 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms