RNA–Protein interactions for RNA: ENST00000488727.5

CCM2-216, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,719 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-216ENST00000488727 TINF2Q9BSI4 451 aa22.06■■□□□ 1.12
CCM2-216ENST00000488727 ZSCAN16Q9H4T2 348 aaPredicted RBP22.06■■□□□ 1.12
CCM2-216ENST00000488727 M0R2N6 131 aa22.06■■□□□ 1.12
CCM2-216ENST00000488727 EIF2AK2P19525 551 aaKnown RBP22.06■■□□□ 1.12
CCM2-216ENST00000488727 GRK4P32298 578 aa22.06■■□□□ 1.12
CCM2-216ENST00000488727 CYP2C19P33261 490 aa22.06■■□□□ 1.12
CCM2-216ENST00000488727 UBXN2AP68543 259 aa22.06■■□□□ 1.12
CCM2-216ENST00000488727 TRIM32Q13049 653 aa22.06■■□□□ 1.12
CCM2-216ENST00000488727 JAKMIP3Q5VZ66 844 aa22.06■■□□□ 1.12
CCM2-216ENST00000488727 FERMT3Q86UX7 667 aa22.06■■□□□ 1.12
CCM2-216ENST00000488727 BLIDQ8IZY5 108 aa22.06■■□□□ 1.12
CCM2-216ENST00000488727 SLAIN1Q8ND83 568 aa22.06■■□□□ 1.12
CCM2-216ENST00000488727 OXER1Q8TDS5 423 aa22.06■■□□□ 1.12
CCM2-216ENST00000488727 NSUN6Q8TEA1 469 aaKnown RBP22.06■■□□□ 1.12
CCM2-216ENST00000488727 PCDHA6Q9UN73 950 aa22.06■■□□□ 1.12
CCM2-216ENST00000488727 PCDHA8Q9Y5H6 950 aa22.06■■□□□ 1.12
CCM2-216ENST00000488727 FRMPD4Q14CM0 1322 aa22.06■■□□□ 1.12
CCM2-216ENST00000488727 RPTORQ8N122 1335 aa22.06■■□□□ 1.12
CCM2-216ENST00000488727 MMP1P03956 469 aa22.05■■□□□ 1.12
CCM2-216ENST00000488727 TRIM29Q14134 588 aa22.05■■□□□ 1.12
CCM2-216ENST00000488727 ARHGEF16Q5VV41 709 aa22.05■■□□□ 1.12
CCM2-216ENST00000488727 GALNT17Q6IS24 598 aa22.05■■□□□ 1.12
CCM2-216ENST00000488727 ARMCX2Q7L311 632 aa22.05■■□□□ 1.12
CCM2-216ENST00000488727 TRMT44Q8IYL2 757 aaKnown RBP22.05■■□□□ 1.12
CCM2-216ENST00000488727 FBXO18Q8NFZ0 1043 aa22.05■■□□□ 1.12
CCM2-216ENST00000488727 IL31RAQ8NI17 732 aa22.05■■□□□ 1.12
CCM2-216ENST00000488727 BICD2Q8TD16 824 aa22.05■■□□□ 1.12
CCM2-216ENST00000488727 SH3TC2Q8TF17 1288 aa22.05■■□□□ 1.12
CCM2-216ENST00000488727 PDCD2LQ9BRP1 358 aa22.05■■□□□ 1.12
CCM2-216ENST00000488727 MYH7BA7E2Y1 1941 aa22.04■■□□□ 1.12
CCM2-216ENST00000488727 SPDYE3A6NKU9 549 aa22.04■■□□□ 1.12
CCM2-216ENST00000488727 SNAI1O95863 264 aaPredicted RBP22.04■■□□□ 1.12
CCM2-216ENST00000488727 HMGCRP04035 888 aa22.04■■□□□ 1.12
CCM2-216ENST00000488727 EDNRBP24530 442 aa22.04■■□□□ 1.12
CCM2-216ENST00000488727 AP3B2Q13367 1082 aa22.04■■□□□ 1.12
CCM2-216ENST00000488727 MSL3Q8N5Y2 521 aaKnown RBP22.04■■□□□ 1.12
CCM2-216ENST00000488727 MORC4Q8TE76 937 aa22.04■■□□□ 1.12
CCM2-216ENST00000488727 ANO3Q9BYT9 981 aa22.04■■□□□ 1.12
CCM2-216ENST00000488727 MCOLN1Q9GZU1 580 aa22.04■■□□□ 1.12
CCM2-216ENST00000488727 SYNGAP1Q96PV0 1343 aa22.03■■□□□ 1.12
CCM2-216ENST00000488727 ASB14A6NK59 587 aa22.03■■□□□ 1.12
CCM2-216ENST00000488727 PGM5Q15124 567 aa22.03■■□□□ 1.12
CCM2-216ENST00000488727 HS1BP3Q53T59 392 aa22.03■■□□□ 1.12
CCM2-216ENST00000488727 FOSP01100 380 aaPredicted RBP22.03■■□□□ 1.12
CCM2-216ENST00000488727 SLC9C1Q4G0N8 1177 aa22.03■■□□□ 1.12
CCM2-216ENST00000488727 CDKN2AIPQ9NXV6 580 aaPredicted RBP22.03■■□□□ 1.12
CCM2-216ENST00000488727 LOC102724159A0A0B4J2E5 919 aa22.02■■□□□ 1.12
CCM2-216ENST00000488727 ESPNB1AK53 854 aa22.02■■□□□ 1.12
CCM2-216ENST00000488727 H3BQV1 296 aa22.02■■□□□ 1.12
CCM2-216ENST00000488727 INHAP05111 366 aa22.02■■□□□ 1.12
CCM2-216ENST00000488727 NR3C2P08235 984 aa22.02■■□□□ 1.12
CCM2-216ENST00000488727 CLCN1P35523 988 aa22.02■■□□□ 1.12
CCM2-216ENST00000488727 CACNB2Q08289 660 aaPredicted RBP22.02■■□□□ 1.12
CCM2-216ENST00000488727 NR5A1Q13285 461 aa22.02■■□□□ 1.12
CCM2-216ENST00000488727 PWP2Q15269 919 aaKnown RBP22.02■■□□□ 1.12
CCM2-216ENST00000488727 UVSSAQ2YD98 709 aa22.02■■□□□ 1.12
CCM2-216ENST00000488727 COL13A1Q5TAT6 717 aaPredicted RBP22.02■■□□□ 1.12
CCM2-216ENST00000488727 IFFO2Q5TF58 517 aa22.02■■□□□ 1.12
CCM2-216ENST00000488727 DIS3L2Q8IYB7 885 aaKnown RBP22.02■■□□□ 1.12
CCM2-216ENST00000488727 IWS1Q96ST2 819 aa22.02■■□□□ 1.12
CCM2-216ENST00000488727 BTBD18B2RXH4 712 aa22.01■■□□□ 1.11
CCM2-216ENST00000488727 KRT2P35908 639 aa22.01■■□□□ 1.11
CCM2-216ENST00000488727 PRAMEF19Q5SWL8 479 aa22.01■■□□□ 1.11
CCM2-216ENST00000488727 MFSD14CQ5VZR4 134 aa22.01■■□□□ 1.11
CCM2-216ENST00000488727 TNFRSF25Q93038 417 aa22.01■■□□□ 1.11
CCM2-216ENST00000488727 KATNBL1Q9H079 304 aa22.01■■□□□ 1.11
CCM2-216ENST00000488727 KIAA1217Q5T5P2 1943 aa22.01■■□□□ 1.11
CCM2-216ENST00000488727 PRKAR2AP13861 404 aaKnown RBP22■■□□□ 1.11
CCM2-216ENST00000488727 PDE4DQ08499 809 aa22■■□□□ 1.11
CCM2-216ENST00000488727 MAP3K21Q5TCX8 1036 aa22■■□□□ 1.11
CCM2-216ENST00000488727 EEPD1Q7L9B9 569 aa22■■□□□ 1.11
CCM2-216ENST00000488727 LEO1Q8WVC0 666 aaPredicted RBP22■■□□□ 1.11
CCM2-216ENST00000488727 ZFP91Q96JP5 570 aaPredicted RBP22■■□□□ 1.11
CCM2-216ENST00000488727 FUCA2Q9BTY2 467 aa22■■□□□ 1.11
CCM2-216ENST00000488727 BRCA2P51587 3418 aa22■■□□□ 1.11
CCM2-216ENST00000488727 MYCLP12524 364 aaPredicted RBP22■■□□□ 1.11
CCM2-216ENST00000488727 CYBAP13498 195 aa22■■□□□ 1.11
CCM2-216ENST00000488727 SREBF1P36956 1147 aa22■■□□□ 1.11
CCM2-216ENST00000488727 MRPS9P82933 396 aaKnown RBP22■■□□□ 1.11
CCM2-216ENST00000488727 EARS2Q5JPH6 523 aaKnown RBP22■■□□□ 1.11
CCM2-216ENST00000488727 MCTP2Q6DN12 878 aa22■■□□□ 1.11
CCM2-216ENST00000488727 FAM173BQ6P4H8 233 aa22■■□□□ 1.11
CCM2-216ENST00000488727 VSIG10LQ86VR7 867 aa22■■□□□ 1.11
CCM2-216ENST00000488727 TRPV1Q8NER1 839 aa22■■□□□ 1.11
CCM2-216ENST00000488727 CRYGNQ8WXF5 182 aa22■■□□□ 1.11
CCM2-216ENST00000488727 SPATA32Q96LK8 384 aa22■■□□□ 1.11
CCM2-216ENST00000488727 BRMS1Q9HCU9 246 aa22■■□□□ 1.11
CCM2-216ENST00000488727 PCNX4Q63HM2 1172 aa21.99■■□□□ 1.11
CCM2-216ENST00000488727 ATL3Q6DD88 541 aa21.99■■□□□ 1.11
CCM2-216ENST00000488727 FBXO16Q8IX29 292 aaPredicted RBP21.99■■□□□ 1.11
CCM2-216ENST00000488727 MPHOSPH6Q99547 160 aaKnown RBP21.99■■□□□ 1.11
CCM2-216ENST00000488727 FAM205CA6NFA0 338 aa21.98■■□□□ 1.11
CCM2-216ENST00000488727 B4DLN1 442 aa21.98■■□□□ 1.11
CCM2-216ENST00000488727 KIF28PB7ZC32 967 aa21.98■■□□□ 1.11
CCM2-216ENST00000488727 ZNF865P0CJ78 1059 aaPredicted RBP21.98■■□□□ 1.11
CCM2-216ENST00000488727 CCND2P30279 289 aa21.98■■□□□ 1.11
CCM2-216ENST00000488727 STXBP2Q15833 593 aa21.98■■□□□ 1.11
CCM2-216ENST00000488727 ABHD16BQ9H3Z7 469 aa21.98■■□□□ 1.11
CCM2-216ENST00000488727 CFAP45Q9UL16 551 aa21.98■■□□□ 1.11
CCM2-216ENST00000488727 EDIL3O43854 480 aa21.97■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms