RNA–Protein interactions for RNA: ENST00000488683.1

CLIC4-202, Transcript of chloride intracellular channel 4, humanhuman

TSL 2

Gene CLIC4, Length 2,723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-202ENST00000488683 TNNT3P45378 269 aaPredicted RBP14.12□□□□□ -0.15
CLIC4-202ENST00000488683 MEA1Q16626 185 aa14.12□□□□□ -0.15
CLIC4-202ENST00000488683 SV2BQ7L1I2 683 aa14.12□□□□□ -0.15
CLIC4-202ENST00000488683 MSANTD4Q8NCY6 345 aa14.12□□□□□ -0.15
CLIC4-202ENST00000488683 HDAC7Q8WUI4 952 aa14.12□□□□□ -0.15
CLIC4-202ENST00000488683 CALML4Q96GE6 196 aa14.12□□□□□ -0.15
CLIC4-202ENST00000488683 JMJD4Q9H9V9 463 aa14.12□□□□□ -0.15
CLIC4-202ENST00000488683 ARHGAP20Q9P2F6 1191 aa14.12□□□□□ -0.15
CLIC4-202ENST00000488683 LTBP1Q14766 1721 aa14.11□□□□□ -0.15
CLIC4-202ENST00000488683 MYH7BA7E2Y1 1941 aa14.11□□□□□ -0.15
CLIC4-202ENST00000488683 BUB1O43683 1085 aa14.11□□□□□ -0.15
CLIC4-202ENST00000488683 MARCH6O60337 910 aa14.11□□□□□ -0.15
CLIC4-202ENST00000488683 SLC7A5Q01650 507 aa14.11□□□□□ -0.15
CLIC4-202ENST00000488683 RRAGAQ7L523 313 aa14.11□□□□□ -0.15
CLIC4-202ENST00000488683 LARP4BQ92615 738 aaKnown RBP14.11□□□□□ -0.15
CLIC4-202ENST00000488683 MAGEF1Q9HAY2 307 aa14.11□□□□□ -0.15
CLIC4-202ENST00000488683 MYO1AQ9UBC5 1043 aa14.11□□□□□ -0.15
CLIC4-202ENST00000488683 ADAM21Q9UKJ8 722 aa14.11□□□□□ -0.15
CLIC4-202ENST00000488683 RAB21Q9UL25 225 aa14.11□□□□□ -0.15
CLIC4-202ENST00000488683 LRRC53A6NM62 1247 aa14.11□□□□□ -0.15
CLIC4-202ENST00000488683 MEIS1O00470 390 aa14.11□□□□□ -0.15
CLIC4-202ENST00000488683 PLCG2P16885 1265 aa14.11□□□□□ -0.15
CLIC4-202ENST00000488683 ADCY7P51828 1080 aa14.11□□□□□ -0.15
CLIC4-202ENST00000488683 GFPT1Q06210 699 aaPredicted RBP14.11□□□□□ -0.15
CLIC4-202ENST00000488683 GABPAQ06546 454 aa14.11□□□□□ -0.15
CLIC4-202ENST00000488683 MAPK8IP2Q13387 824 aaPredicted RBP14.11□□□□□ -0.15
CLIC4-202ENST00000488683 SAMD1Q6SPF0 538 aaPredicted RBP14.11□□□□□ -0.15
CLIC4-202ENST00000488683 TRAPPC11Q7Z392 1133 aa14.11□□□□□ -0.15
CLIC4-202ENST00000488683 CAGE1Q8TC20 777 aa14.11□□□□□ -0.15
CLIC4-202ENST00000488683 COG1Q8WTW3 980 aa14.11□□□□□ -0.15
CLIC4-202ENST00000488683 IKZF4Q9H2S9 585 aa14.11□□□□□ -0.15
CLIC4-202ENST00000488683 USP40Q9NVE5 1235 aa14.11□□□□□ -0.15
CLIC4-202ENST00000488683 ESYT2A0FGR8 921 aa14.1□□□□□ -0.15
CLIC4-202ENST00000488683 MAP2K7O14733 419 aa14.1□□□□□ -0.15
CLIC4-202ENST00000488683 EIF4A3P38919 411 aaKnown RBP14.1□□□□□ -0.15
CLIC4-202ENST00000488683 RNASE9P60153 205 aaKnown RBP14.1□□□□□ -0.15
CLIC4-202ENST00000488683 CASP8Q14790 479 aa14.1□□□□□ -0.15
CLIC4-202ENST00000488683 BRD3Q15059 726 aa14.1□□□□□ -0.15
CLIC4-202ENST00000488683 RBM17Q96I25 401 aaKnown RBP14.1□□□□□ -0.15
CLIC4-202ENST00000488683 DBNDD1Q9H9R9 158 aa14.1□□□□□ -0.15
CLIC4-202ENST00000488683 L1RE1Q9UN81 338 aa14.1□□□□□ -0.15
CLIC4-202ENST00000488683 BICDL2A1A5D9 508 aa14.1□□□□□ -0.15
CLIC4-202ENST00000488683 SMARCA1P28370 1054 aa14.1□□□□□ -0.15
CLIC4-202ENST00000488683 WHAMMP3Q1A5X7 153 aa14.1□□□□□ -0.15
CLIC4-202ENST00000488683 NFRKBQ6P4R8 1299 aa14.1□□□□□ -0.15
CLIC4-202ENST00000488683 FOXR1Q6PIV2 292 aa14.1□□□□□ -0.15
CLIC4-202ENST00000488683 ZSCAN29Q8IWY8 852 aaPredicted RBP14.1□□□□□ -0.15
CLIC4-202ENST00000488683 NOC3LQ8WTT2 800 aaKnown RBP14.1□□□□□ -0.15
CLIC4-202ENST00000488683 HAS1Q92839 578 aa14.1□□□□□ -0.15
CLIC4-202ENST00000488683 TRIM34Q9BYJ4 488 aa14.1□□□□□ -0.15
CLIC4-202ENST00000488683 RABEP2Q9H5N1 569 aa14.1□□□□□ -0.15
CLIC4-202ENST00000488683 HAUS4Q9H6D7 363 aa14.1□□□□□ -0.15
CLIC4-202ENST00000488683 PODXL2Q9NZ53 605 aa14.1□□□□□ -0.15
CLIC4-202ENST00000488683 SAR1BQ9Y6B6 198 aa14.1□□□□□ -0.15
CLIC4-202ENST00000488683 SMCHD1A6NHR9 2005 aa14.1□□□□□ -0.15
CLIC4-202ENST00000488683 ANKRD65E5RJM6 399 aa14.09□□□□□ -0.15
CLIC4-202ENST00000488683 PSMD14O00487 310 aa14.09□□□□□ -0.15
CLIC4-202ENST00000488683 CENPPQ6IPU0 288 aa14.09□□□□□ -0.15
CLIC4-202ENST00000488683 CERS3Q8IU89 383 aa14.09□□□□□ -0.15
CLIC4-202ENST00000488683 P2RX7Q99572 595 aaKnown RBP14.09□□□□□ -0.15
CLIC4-202ENST00000488683 NDST4Q9H3R1 872 aa14.09□□□□□ -0.15
CLIC4-202ENST00000488683 PLIN4Q96Q06 1357 aa14.09□□□□□ -0.15
CLIC4-202ENST00000488683 IGKV6D-41A0A0C4DH26 115 aa14.09□□□□□ -0.15
CLIC4-202ENST00000488683 POTEB3A0JP26 581 aa14.09□□□□□ -0.15
CLIC4-202ENST00000488683 POTECB2RU33 542 aa14.09□□□□□ -0.15
CLIC4-202ENST00000488683 SNHG28P0DPA3 235 aa14.09□□□□□ -0.15
CLIC4-202ENST00000488683 USH1GQ495M9 461 aa14.09□□□□□ -0.15
CLIC4-202ENST00000488683 MSL1Q68DK7 614 aa14.09□□□□□ -0.15
CLIC4-202ENST00000488683 CNNM4Q6P4Q7 775 aa14.09□□□□□ -0.15
CLIC4-202ENST00000488683 POTEBQ6S5H4 581 aa14.09□□□□□ -0.15
CLIC4-202ENST00000488683 PROCA1Q8NCQ7 364 aaPredicted RBP14.09□□□□□ -0.15
CLIC4-202ENST00000488683 CCDC42Q96M95 316 aa14.09□□□□□ -0.15
CLIC4-202ENST00000488683 PACSIN2Q9UNF0 486 aaPredicted RBP14.09□□□□□ -0.15
CLIC4-202ENST00000488683 MYH4Q9Y623 1939 aa14.09□□□□□ -0.15
CLIC4-202ENST00000488683 TRIM37O94972 964 aa14.08□□□□□ -0.15
CLIC4-202ENST00000488683 FXR2P51116 673 aaKnown RBP eCLIP14.08□□□□□ -0.15
CLIC4-202ENST00000488683 ZBED6P86452 979 aa14.08□□□□□ -0.15
CLIC4-202ENST00000488683 TUBB2AQ13885 445 aa14.08□□□□□ -0.15
CLIC4-202ENST00000488683 KIAA0825Q8IV33 1275 aa14.08□□□□□ -0.15
CLIC4-202ENST00000488683 CCDC47Q96A33 483 aaKnown RBP14.08□□□□□ -0.15
CLIC4-202ENST00000488683 MS4A14Q96JA4 679 aa14.08□□□□□ -0.15
CLIC4-202ENST00000488683 TUBB2BQ9BVA1 445 aa14.08□□□□□ -0.15
CLIC4-202ENST00000488683 DDX25Q9UHL0 483 aaKnown RBP14.08□□□□□ -0.15
CLIC4-202ENST00000488683 KIAA1024Q9UPX6 916 aa14.08□□□□□ -0.15
CLIC4-202ENST00000488683 ARFGEF1Q9Y6D6 1849 aa14.08□□□□□ -0.16
CLIC4-202ENST00000488683 AMPD3Q01432 767 aa14.08□□□□□ -0.16
CLIC4-202ENST00000488683 SEMA3FQ13275 785 aa14.08□□□□□ -0.16
CLIC4-202ENST00000488683 VWA3BQ502W6 1294 aa14.08□□□□□ -0.16
CLIC4-202ENST00000488683 TBC1D22AQ8WUA7 517 aa14.08□□□□□ -0.16
CLIC4-202ENST00000488683 HNRNPLLQ8WVV9 542 aaKnown RBP14.08□□□□□ -0.16
CLIC4-202ENST00000488683 ERGIC2Q96RQ1 377 aa14.08□□□□□ -0.16
CLIC4-202ENST00000488683 DEF6Q9H4E7 631 aa14.08□□□□□ -0.16
CLIC4-202ENST00000488683 ZNHIT6Q9NWK9 470 aaKnown RBP14.08□□□□□ -0.16
CLIC4-202ENST00000488683 TULP1O00294 542 aaPredicted RBP14.07□□□□□ -0.16
CLIC4-202ENST00000488683 BBOX1O75936 387 aa14.07□□□□□ -0.16
CLIC4-202ENST00000488683 GDF11O95390 407 aa14.07□□□□□ -0.16
CLIC4-202ENST00000488683 SHMT1P34896 483 aa14.07□□□□□ -0.16
CLIC4-202ENST00000488683 RASSF7Q02833 373 aa14.07□□□□□ -0.16
CLIC4-202ENST00000488683 UNC13DQ70J99 1090 aa14.07□□□□□ -0.16
CLIC4-202ENST00000488683 RAD54LQ92698 747 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms