RNA–Protein interactions for RNA: ENST00000488623.5

CTNS-206, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3

Gene CTNS, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-206ENST00000488623 MTMR9Q96QG7 549 aa17.17■□□□□ 0.34
CTNS-206ENST00000488623 MMP19Q99542 508 aa17.17■□□□□ 0.34
CTNS-206ENST00000488623 DDX25Q9UHL0 483 aaKnown RBP17.17■□□□□ 0.34
CTNS-206ENST00000488623 PFASO15067 1338 aa17.17■□□□□ 0.34
CTNS-206ENST00000488623 EIF2AK2P19525 551 aaKnown RBP17.16■□□□□ 0.34
CTNS-206ENST00000488623 ZNF76P36508 570 aa17.16■□□□□ 0.34
CTNS-206ENST00000488623 CRHR2Q13324 411 aa17.16■□□□□ 0.34
CTNS-206ENST00000488623 PGM5Q15124 567 aa17.16■□□□□ 0.34
CTNS-206ENST00000488623 Q4G0T1 1027 aa17.16■□□□□ 0.34
CTNS-206ENST00000488623 WDR78Q5VTH9 848 aa17.16■□□□□ 0.34
CTNS-206ENST00000488623 ARHGEF16Q5VV41 709 aa17.16■□□□□ 0.34
CTNS-206ENST00000488623 ARL6IP4Q66PJ3 421 aaKnown RBP17.16■□□□□ 0.34
CTNS-206ENST00000488623 FAM133AQ8N9E0 248 aa17.16■□□□□ 0.34
CTNS-206ENST00000488623 CYP2W1Q8TAV3 490 aa17.16■□□□□ 0.34
CTNS-206ENST00000488623 ABHD8Q96I13 439 aa17.16■□□□□ 0.34
CTNS-206ENST00000488623 PDCD2LQ9BRP1 358 aa17.16■□□□□ 0.34
CTNS-206ENST00000488623 DNAJC25-GNG10A0A024R161 153 aa17.15■□□□□ 0.34
CTNS-206ENST00000488623 GOLGA6L4A6NEF3 574 aa17.15■□□□□ 0.34
CTNS-206ENST00000488623 SOWAHBA6NEL2 793 aa17.15■□□□□ 0.34
CTNS-206ENST00000488623 POTEB2H3BUK9 544 aa17.15■□□□□ 0.34
CTNS-206ENST00000488623 LAD1O00515 517 aa17.15■□□□□ 0.34
CTNS-206ENST00000488623 OR52Z1P0C646 297 aa17.15■□□□□ 0.34
CTNS-206ENST00000488623 FCER1AP12319 257 aa17.15■□□□□ 0.34
CTNS-206ENST00000488623 MRPS9P82933 396 aaKnown RBP17.15■□□□□ 0.34
CTNS-206ENST00000488623 KCTD2Q14681 263 aa17.15■□□□□ 0.34
CTNS-206ENST00000488623 PRR16Q569H4 304 aa17.15■□□□□ 0.34
CTNS-206ENST00000488623 PCNX4Q63HM2 1172 aa17.15■□□□□ 0.34
CTNS-206ENST00000488623 NSUN6Q8TEA1 469 aaKnown RBP17.15■□□□□ 0.34
CTNS-206ENST00000488623 HAS1Q92839 578 aa17.15■□□□□ 0.34
CTNS-206ENST00000488623 FERMT2Q96AC1 680 aa17.15■□□□□ 0.34
CTNS-206ENST00000488623 LENG9Q96B70 501 aa17.15■□□□□ 0.34
CTNS-206ENST00000488623 ASTN1O14525 1302 aa17.15■□□□□ 0.34
CTNS-206ENST00000488623 IGLV3-22A0A075B6J6 115 aa17.14■□□□□ 0.33
CTNS-206ENST00000488623 A0A1W2PQ27 194 aa17.14■□□□□ 0.33
CTNS-206ENST00000488623 A0A1W2PQ64 194 aa17.14■□□□□ 0.33
CTNS-206ENST00000488623 A0A1W2PQD8 194 aa17.14■□□□□ 0.33
CTNS-206ENST00000488623 MEIS1O00470 390 aa17.14■□□□□ 0.33
CTNS-206ENST00000488623 TRAK2O60296 914 aa17.14■□□□□ 0.33
CTNS-206ENST00000488623 ALDH1A1P00352 501 aa17.14■□□□□ 0.33
CTNS-206ENST00000488623 PGK2P07205 417 aa17.14■□□□□ 0.33
CTNS-206ENST00000488623 NR3C2P08235 984 aa17.14■□□□□ 0.33
CTNS-206ENST00000488623 MYCLP12524 364 aaPredicted RBP17.14■□□□□ 0.33
CTNS-206ENST00000488623 PRPHP41219 470 aa17.14■□□□□ 0.33
CTNS-206ENST00000488623 CALCRLQ16602 461 aa17.14■□□□□ 0.33
CTNS-206ENST00000488623 SHC4Q6S5L8 630 aa17.14■□□□□ 0.33
CTNS-206ENST00000488623 VSIG10LQ86VR7 867 aa17.14■□□□□ 0.33
CTNS-206ENST00000488623 CCAR1Q8IX12 1150 aaKnown RBP17.14■□□□□ 0.33
CTNS-206ENST00000488623 ZNF579Q8NAF0 562 aaKnown RBP17.14■□□□□ 0.33
CTNS-206ENST00000488623 DNERQ8NFT8 737 aa17.14■□□□□ 0.33
CTNS-206ENST00000488623 MXRA8Q9BRK3 442 aa17.14■□□□□ 0.33
CTNS-206ENST00000488623 CSRNP2Q9H175 543 aa17.14■□□□□ 0.33
CTNS-206ENST00000488623 UBIAD1Q9Y5Z9 338 aa17.14■□□□□ 0.33
CTNS-206ENST00000488623 VWA3AA6NCI4 1184 aa17.13■□□□□ 0.33
CTNS-206ENST00000488623 STRNO43815 780 aa17.13■□□□□ 0.33
CTNS-206ENST00000488623 ITGB5P18084 799 aa17.13■□□□□ 0.33
CTNS-206ENST00000488623 CMA1P23946 247 aa17.13■□□□□ 0.33
CTNS-206ENST00000488623 MAPK4P31152 587 aa17.13■□□□□ 0.33
CTNS-206ENST00000488623 CEP55Q53EZ4 464 aa17.13■□□□□ 0.33
CTNS-206ENST00000488623 SPECC1Q5M775 1068 aa17.13■□□□□ 0.33
CTNS-206ENST00000488623 XRRA1Q6P2D8 792 aa17.13■□□□□ 0.33
CTNS-206ENST00000488623 DTHD1Q6ZMT9 781 aa17.13■□□□□ 0.33
CTNS-206ENST00000488623 GPR142Q7Z601 462 aa17.13■□□□□ 0.33
CTNS-206ENST00000488623 PLEKHH3Q7Z736 793 aa17.13■□□□□ 0.33
CTNS-206ENST00000488623 PLA2G4DQ86XP0 818 aa17.13■□□□□ 0.33
CTNS-206ENST00000488623 ABRAQ8N0Z2 381 aa17.13■□□□□ 0.33
CTNS-206ENST00000488623 GJA10Q969M2 543 aa17.13■□□□□ 0.33
CTNS-206ENST00000488623 FGD4Q96M96 766 aa17.13■□□□□ 0.33
CTNS-206ENST00000488623 UIMC1Q96RL1 719 aa17.13■□□□□ 0.33
CTNS-206ENST00000488623 IWS1Q96ST2 819 aa17.13■□□□□ 0.33
CTNS-206ENST00000488623 MCOLN1Q9GZU1 580 aa17.13■□□□□ 0.33
CTNS-206ENST00000488623 GOLPH3LQ9H4A5 285 aa17.13■□□□□ 0.33
CTNS-206ENST00000488623 KCNMB3Q9NPA1 279 aa17.13■□□□□ 0.33
CTNS-206ENST00000488623 DDX49Q9Y6V7 483 aaKnown RBP17.13■□□□□ 0.33
CTNS-206ENST00000488623 MSH4O15457 936 aa17.12■□□□□ 0.33
CTNS-206ENST00000488623 COBLO75128 1261 aa17.12■□□□□ 0.33
CTNS-206ENST00000488623 ARP10275 920 aa17.12■□□□□ 0.33
CTNS-206ENST00000488623 LIG1P18858 919 aa17.12■□□□□ 0.33
CTNS-206ENST00000488623 CCND2P30279 289 aa17.12■□□□□ 0.33
CTNS-206ENST00000488623 TXKP42681 527 aa17.12■□□□□ 0.33
CTNS-206ENST00000488623 ALDH5A1P51649 535 aaPredicted RBP17.12■□□□□ 0.33
CTNS-206ENST00000488623 SKOR2Q2VWA4 1001 aaPredicted RBP17.12■□□□□ 0.33
CTNS-206ENST00000488623 RESP18Q5W5W9 173 aa17.12■□□□□ 0.33
CTNS-206ENST00000488623 NIPA1Q7RTP0 329 aa17.12■□□□□ 0.33
CTNS-206ENST00000488623 FSIP1Q8NA03 581 aa17.12■□□□□ 0.33
CTNS-206ENST00000488623 ETNPPLQ8TBG4 499 aa17.12■□□□□ 0.33
CTNS-206ENST00000488623 JADE2Q9NQC1 790 aa17.12■□□□□ 0.33
CTNS-206ENST00000488623 PLXNB2O15031 1838 aa17.12■□□□□ 0.33
CTNS-206ENST00000488623 A0A1B0GVL5 298 aa17.11■□□□□ 0.33
CTNS-206ENST00000488623 TBX3O15119 743 aa17.11■□□□□ 0.33
CTNS-206ENST00000488623 MBD3O95983 291 aa17.11■□□□□ 0.33
CTNS-206ENST00000488623 ADORA2AP29274 412 aa17.11■□□□□ 0.33
CTNS-206ENST00000488623 TECP42680 631 aa17.11■□□□□ 0.33
CTNS-206ENST00000488623 ZNF792Q3KQV3 632 aa17.11■□□□□ 0.33
CTNS-206ENST00000488623 USP49Q70CQ1 688 aa17.11■□□□□ 0.33
CTNS-206ENST00000488623 MRPS27Q92552 414 aaKnown RBP17.11■□□□□ 0.33
CTNS-206ENST00000488623 WDR11Q9BZH6 1224 aa17.11■□□□□ 0.33
CTNS-206ENST00000488623 ADD3Q9UEY8 706 aaKnown RBP17.11■□□□□ 0.33
CTNS-206ENST00000488623 DOCK3Q8IZD9 2030 aa17.11■□□□□ 0.33
CTNS-206ENST00000488623 FAM237AA0A1B0GTK4 181 aa17.1■□□□□ 0.33
CTNS-206ENST00000488623 SLC15A5A6NIM6 579 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms