RNA–Protein interactions for RNA: ENST00000488155.1

NIPAL3-207, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best)

Gene NIPAL3, Length 931 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-207ENST00000488155 LY9Q9HBG7 655 aa13.11□□□□□ -0.31
NIPAL3-207ENST00000488155 ANO2Q9NQ90 1003 aa13.11□□□□□ -0.31
NIPAL3-207ENST00000488155 MRVI1Q9Y6F6 885 aa13.11□□□□□ -0.31
NIPAL3-207ENST00000488155 PTPRSQ13332 1948 aa13.11□□□□□ -0.31
NIPAL3-207ENST00000488155 RBAK-RBAKDNI3L0D1 243 aa13.1□□□□□ -0.31
NIPAL3-207ENST00000488155 SLC27A2O14975 620 aa13.1□□□□□ -0.31
NIPAL3-207ENST00000488155 EIF3JO75822 258 aaKnown RBP13.1□□□□□ -0.31
NIPAL3-207ENST00000488155 FGBP02675 491 aa13.1□□□□□ -0.31
NIPAL3-207ENST00000488155 MMP3P08254 477 aa13.1□□□□□ -0.31
NIPAL3-207ENST00000488155 DNAJB2P25686 324 aa13.1□□□□□ -0.31
NIPAL3-207ENST00000488155 PBX2P40425 430 aa13.1□□□□□ -0.31
NIPAL3-207ENST00000488155 ARHGAP1Q07960 439 aa13.1□□□□□ -0.31
NIPAL3-207ENST00000488155 CREB3L3Q68CJ9 461 aa13.1□□□□□ -0.31
NIPAL3-207ENST00000488155 PSRC1Q6PGN9 363 aaPredicted RBP13.1□□□□□ -0.31
NIPAL3-207ENST00000488155 DEFB128Q7Z7B8 93 aa13.1□□□□□ -0.31
NIPAL3-207ENST00000488155 ZNF654Q8IZM8 581 aa13.1□□□□□ -0.31
NIPAL3-207ENST00000488155 CMTR1Q8N1G2 835 aaKnown RBP13.1□□□□□ -0.31
NIPAL3-207ENST00000488155 PDCD2LQ9BRP1 358 aa13.1□□□□□ -0.31
NIPAL3-207ENST00000488155 SEZ6LQ9BYH1 1024 aa13.1□□□□□ -0.31
NIPAL3-207ENST00000488155 CXXC1Q9P0U4 656 aaPredicted RBP13.1□□□□□ -0.31
NIPAL3-207ENST00000488155 DDX41Q9UJV9 622 aaKnown RBP13.1□□□□□ -0.31
NIPAL3-207ENST00000488155 PNMA6FA0A0J9YX94 578 aa13.09□□□□□ -0.31
NIPAL3-207ENST00000488155 GCOM1H8Y6P7 765 aaPredicted RBP13.09□□□□□ -0.31
NIPAL3-207ENST00000488155 KPNA6O60684 536 aa13.09□□□□□ -0.31
NIPAL3-207ENST00000488155 POLR2MP0CAP2 368 aa13.09□□□□□ -0.31
NIPAL3-207ENST00000488155 MCM5P33992 734 aa13.09□□□□□ -0.31
NIPAL3-207ENST00000488155 PGM5Q15124 567 aa13.09□□□□□ -0.31
NIPAL3-207ENST00000488155 CTCFLQ8NI51 663 aaPredicted RBP13.09□□□□□ -0.31
NIPAL3-207ENST00000488155 PRUNE2Q8WUY3 3088 aa13.09□□□□□ -0.31
NIPAL3-207ENST00000488155 GPKOWQ92917 476 aaPredicted RBP eCLIP13.09□□□□□ -0.31
NIPAL3-207ENST00000488155 ALG1Q9BT22 464 aa13.09□□□□□ -0.31
NIPAL3-207ENST00000488155 MAF1Q9H063 256 aa13.09□□□□□ -0.31
NIPAL3-207ENST00000488155 NOD1Q9Y239 953 aa13.09□□□□□ -0.31
NIPAL3-207ENST00000488155 LOXHD1Q8IVV2 1947 aa13.09□□□□□ -0.31
NIPAL3-207ENST00000488155 EYSQ5T1H1 3165 aa13.08□□□□□ -0.32
NIPAL3-207ENST00000488155 CCDC69A6NI79 296 aa13.08□□□□□ -0.32
NIPAL3-207ENST00000488155 ZBBXA8MT70 800 aa13.08□□□□□ -0.32
NIPAL3-207ENST00000488155 RGS20O76081 388 aa13.08□□□□□ -0.32
NIPAL3-207ENST00000488155 PLEKHA8P1O95397 391 aa13.08□□□□□ -0.32
NIPAL3-207ENST00000488155 SUPT20HL2P0C7V6 817 aa13.08□□□□□ -0.32
NIPAL3-207ENST00000488155 CASTP20810 708 aaKnown RBP13.08□□□□□ -0.32
NIPAL3-207ENST00000488155 GRIN2CQ14957 1233 aa13.08□□□□□ -0.32
NIPAL3-207ENST00000488155 NFRKBQ6P4R8 1299 aa13.08□□□□□ -0.32
NIPAL3-207ENST00000488155 CENPQQ7L2Z9 268 aaPredicted RBP13.08□□□□□ -0.32
NIPAL3-207ENST00000488155 DHX37Q8IY37 1157 aaKnown RBP13.08□□□□□ -0.32
NIPAL3-207ENST00000488155 CCDC82Q8N4S0 544 aa13.08□□□□□ -0.32
NIPAL3-207ENST00000488155 HERVK_113Q902F9 699 aa13.08□□□□□ -0.32
NIPAL3-207ENST00000488155 KAT2BQ92831 832 aa13.08□□□□□ -0.32
NIPAL3-207ENST00000488155 TIFAQ96CG3 184 aa13.08□□□□□ -0.32
NIPAL3-207ENST00000488155 PBX4Q9BYU1 374 aa13.08□□□□□ -0.32
NIPAL3-207ENST00000488155 A0A0C4DFX4 3053 aa13.07□□□□□ -0.32
NIPAL3-207ENST00000488155 hCG_1642624A0A1W2PR95 340 aa13.07□□□□□ -0.32
NIPAL3-207ENST00000488155 SH2B2O14492 632 aaPredicted RBP13.07□□□□□ -0.32
NIPAL3-207ENST00000488155 ZNF286BP0CG31 522 aa13.07□□□□□ -0.32
NIPAL3-207ENST00000488155 FOSL2P15408 326 aa13.07□□□□□ -0.32
NIPAL3-207ENST00000488155 GHRHRQ02643 423 aa13.07□□□□□ -0.32
NIPAL3-207ENST00000488155 NECTIN1Q15223 517 aa13.07□□□□□ -0.32
NIPAL3-207ENST00000488155 PTGISQ16647 500 aa13.07□□□□□ -0.32
NIPAL3-207ENST00000488155 RASIP1Q5U651 963 aa13.07□□□□□ -0.32
NIPAL3-207ENST00000488155 VSIG10LQ86VR7 867 aa13.07□□□□□ -0.32
NIPAL3-207ENST00000488155 RPUSD2Q8IZ73 545 aaKnown RBP13.07□□□□□ -0.32
NIPAL3-207ENST00000488155 SRBD1Q8N5C6 995 aaKnown RBP13.07□□□□□ -0.32
NIPAL3-207ENST00000488155 VWCEQ96DN2 955 aa13.07□□□□□ -0.32
NIPAL3-207ENST00000488155 RRP36Q96EU6 259 aaKnown RBP13.07□□□□□ -0.32
NIPAL3-207ENST00000488155 TCEANC2Q96MN5 208 aa13.07□□□□□ -0.32
NIPAL3-207ENST00000488155 ZNF576Q9H609 170 aa13.07□□□□□ -0.32
NIPAL3-207ENST00000488155 RTEL1Q9NZ71 1219 aa13.07□□□□□ -0.32
NIPAL3-207ENST00000488155 TCF20Q9UGU0 1960 aaKnown RBP13.07□□□□□ -0.32
NIPAL3-207ENST00000488155 PRRC2BQ5JSZ5 2229 aaKnown RBP13.07□□□□□ -0.32
NIPAL3-207ENST00000488155 DLL1O00548 723 aa13.06□□□□□ -0.32
NIPAL3-207ENST00000488155 DDAH1O94760 285 aa13.06□□□□□ -0.32
NIPAL3-207ENST00000488155 GGPS1O95749 300 aa13.06□□□□□ -0.32
NIPAL3-207ENST00000488155 CCND2P30279 289 aa13.06□□□□□ -0.32
NIPAL3-207ENST00000488155 KIF5BP33176 963 aa13.06□□□□□ -0.32
NIPAL3-207ENST00000488155 PSEN2P49810 448 aa13.06□□□□□ -0.32
NIPAL3-207ENST00000488155 RABGGTBP53611 331 aa13.06□□□□□ -0.32
NIPAL3-207ENST00000488155 SP2Q02086 613 aa13.06□□□□□ -0.32
NIPAL3-207ENST00000488155 TRAF1Q13077 416 aa13.06□□□□□ -0.32
NIPAL3-207ENST00000488155 LAMC2Q13753 1193 aa13.06□□□□□ -0.32
NIPAL3-207ENST00000488155 DGKDQ16760 1214 aa13.06□□□□□ -0.32
NIPAL3-207ENST00000488155 BMP2KLQ5H9B9 411 aa13.06□□□□□ -0.32
NIPAL3-207ENST00000488155 GDF6Q6KF10 455 aaPredicted RBP13.06□□□□□ -0.32
NIPAL3-207ENST00000488155 USP17L6PQ6QN14 398 aa13.06□□□□□ -0.32
NIPAL3-207ENST00000488155 RETREG2Q8NC44 543 aa13.06□□□□□ -0.32
NIPAL3-207ENST00000488155 MAFAQ8NHW3 353 aaPredicted RBP13.06□□□□□ -0.32
NIPAL3-207ENST00000488155 TMEM87BQ96K49 555 aa13.06□□□□□ -0.32
NIPAL3-207ENST00000488155 MTIF3Q9H2K0 278 aaKnown RBP13.06□□□□□ -0.32
NIPAL3-207ENST00000488155 NKX2-4Q9H2Z4 354 aa13.06□□□□□ -0.32
NIPAL3-207ENST00000488155 BCAS3Q9H6U6 928 aa13.06□□□□□ -0.32
NIPAL3-207ENST00000488155 MAP3K20Q9NYL2 800 aaKnown RBP13.06□□□□□ -0.32
NIPAL3-207ENST00000488155 HDAC6Q9UBN7 1215 aa13.06□□□□□ -0.32
NIPAL3-207ENST00000488155 SEC63Q9UGP8 760 aaKnown RBP13.06□□□□□ -0.32
NIPAL3-207ENST00000488155 MICAL3Q7RTP6 2002 aa13.06□□□□□ -0.32
NIPAL3-207ENST00000488155 EVPLQ92817 2033 aa13.06□□□□□ -0.32
NIPAL3-207ENST00000488155 WDR81Q562E7 1941 aa13.05□□□□□ -0.32
NIPAL3-207ENST00000488155 UNC80Q8N2C7 3258 aa13.05□□□□□ -0.32
NIPAL3-207ENST00000488155 MYH9P35579 1960 aaKnown RBP13.05□□□□□ -0.32
NIPAL3-207ENST00000488155 MYOGP15173 224 aa13.05□□□□□ -0.32
NIPAL3-207ENST00000488155 PTPN11Q06124 597 aaPredicted RBP13.05□□□□□ -0.32
NIPAL3-207ENST00000488155 HSDL1Q3SXM5 330 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms