RNA–Protein interactions for RNA: ENST00000488058.1

RNF38-208, Transcript of ring finger protein 38, humanhuman

TSL 3

Gene RNF38, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-208ENST00000488058 MRVI1Q9Y6F6 885 aa27.37■■□□□ 1.97
RNF38-208ENST00000488058 KIAA0355O15063 1070 aa27.36■■□□□ 1.97
RNF38-208ENST00000488058 GH1P01241 217 aa27.36■■□□□ 1.97
RNF38-208ENST00000488058 Q6ZUG5 572 aa27.36■■□□□ 1.97
RNF38-208ENST00000488058 FAM126BQ8IXS8 530 aa27.36■■□□□ 1.97
RNF38-208ENST00000488058 ITGB8P26012 769 aa27.35■■□□□ 1.97
RNF38-208ENST00000488058 CCND2P30279 289 aa27.35■■□□□ 1.97
RNF38-208ENST00000488058 SOX1O00570 391 aaPredicted RBP27.34■■□□□ 1.97
RNF38-208ENST00000488058 CASTP20810 708 aaKnown RBP27.34■■□□□ 1.97
RNF38-208ENST00000488058 PURAQ00577 322 aaKnown RBP27.34■■□□□ 1.97
RNF38-208ENST00000488058 APOBRQ0VD83 1088 aa27.34■■□□□ 1.97
RNF38-208ENST00000488058 USP17L6PQ6QN14 398 aa27.34■■□□□ 1.97
RNF38-208ENST00000488058 HEATR3Q7Z4Q2 680 aa27.34■■□□□ 1.97
RNF38-208ENST00000488058 GPKOWQ92917 476 aaPredicted RBP eCLIP27.34■■□□□ 1.97
RNF38-208ENST00000488058 BRF1Q92994 677 aa27.34■■□□□ 1.97
RNF38-208ENST00000488058 MTG1Q9BT17 334 aaPredicted RBP27.34■■□□□ 1.97
RNF38-208ENST00000488058 GRIN2DO15399 1336 aa27.34■■□□□ 1.97
RNF38-208ENST00000488058 CNTNAP5Q8WYK1 1306 aa27.34■■□□□ 1.97
RNF38-208ENST00000488058 A6NJR5 290 aa27.33■■□□□ 1.97
RNF38-208ENST00000488058 PSMA5P28066 241 aa27.33■■□□□ 1.97
RNF38-208ENST00000488058 CHMP4BP1P59074 171 aa27.33■■□□□ 1.97
RNF38-208ENST00000488058 VSIG10LQ86VR7 867 aa27.33■■□□□ 1.97
RNF38-208ENST00000488058 AFG1LQ8WV93 481 aa27.33■■□□□ 1.97
RNF38-208ENST00000488058 LRCH3Q96II8 777 aa27.33■■□□□ 1.97
RNF38-208ENST00000488058 PPP1R12CQ9BZL4 782 aa27.33■■□□□ 1.97
RNF38-208ENST00000488058 DDX41Q9UJV9 622 aaKnown RBP27.33■■□□□ 1.97
RNF38-208ENST00000488058 TBX21Q9UL17 535 aa27.33■■□□□ 1.97
RNF38-208ENST00000488058 SORBS3O60504 671 aa27.32■■□□□ 1.96
RNF38-208ENST00000488058 RPS6KB1P23443 525 aa27.32■■□□□ 1.96
RNF38-208ENST00000488058 ARHGAP1Q07960 439 aa27.32■■□□□ 1.96
RNF38-208ENST00000488058 SLC43A3Q8NBI5 491 aa27.32■■□□□ 1.96
RNF38-208ENST00000488058 MYH7BA7E2Y1 1941 aa27.31■■□□□ 1.96
RNF38-208ENST00000488058 KPNA6O60684 536 aa27.31■■□□□ 1.96
RNF38-208ENST00000488058 RGS20O76081 388 aa27.31■■□□□ 1.96
RNF38-208ENST00000488058 METAP2P50579 478 aaKnown RBP eCLIP27.31■■□□□ 1.96
RNF38-208ENST00000488058 FAM47CQ5HY64 1035 aa27.31■■□□□ 1.96
RNF38-208ENST00000488058 PPP1R13LQ8WUF5 828 aa27.31■■□□□ 1.96
RNF38-208ENST00000488058 PSTPIP2Q9H939 334 aa27.31■■□□□ 1.96
RNF38-208ENST00000488058 MEIS2O14770 477 aa27.3■■□□□ 1.96
RNF38-208ENST00000488058 TIMP1P01033 207 aa27.3■■□□□ 1.96
RNF38-208ENST00000488058 CD4P01730 458 aa27.3■■□□□ 1.96
RNF38-208ENST00000488058 MMP3P08254 477 aa27.3■■□□□ 1.96
RNF38-208ENST00000488058 CDC27P30260 824 aa27.3■■□□□ 1.96
RNF38-208ENST00000488058 FPGSQ05932 587 aa27.3■■□□□ 1.96
RNF38-208ENST00000488058 DHX37Q8IY37 1157 aaKnown RBP27.3■■□□□ 1.96
RNF38-208ENST00000488058 USP26Q9BXU7 913 aa27.3■■□□□ 1.96
RNF38-208ENST00000488058 SEZ6LQ9BYH1 1024 aa27.3■■□□□ 1.96
RNF38-208ENST00000488058 TRPV6Q9H1D0 765 aa27.3■■□□□ 1.96
RNF38-208ENST00000488058 PIK3CDO00329 1044 aa27.29■■□□□ 1.96
RNF38-208ENST00000488058 EPB41L2O43491 1005 aaKnown RBP27.29■■□□□ 1.96
RNF38-208ENST00000488058 B4GALT4O60513 344 aa27.29■■□□□ 1.96
RNF38-208ENST00000488058 SHHQ15465 462 aa27.29■■□□□ 1.96
RNF38-208ENST00000488058 UBE2SQ16763 222 aa27.29■■□□□ 1.96
RNF38-208ENST00000488058 C9orf50Q5SZB4 431 aa27.29■■□□□ 1.96
RNF38-208ENST00000488058 KCNV1Q6PIU1 500 aa27.29■■□□□ 1.96
RNF38-208ENST00000488058 RTEL1Q9NZ71 1219 aa27.29■■□□□ 1.96
RNF38-208ENST00000488058 V9GY48 417 aaPredicted RBP27.29■■□□□ 1.96
RNF38-208ENST00000488058 FRMPD4Q14CM0 1322 aa27.29■■□□□ 1.96
RNF38-208ENST00000488058 RCAN1P53805 252 aa27.28■■□□□ 1.96
RNF38-208ENST00000488058 NBPF20Q3BBV1 942 aa27.28■■□□□ 1.96
RNF38-208ENST00000488058 LRIT3Q3SXY7 679 aa27.28■■□□□ 1.96
RNF38-208ENST00000488058 WWC2Q6AWC2 1192 aa27.28■■□□□ 1.96
RNF38-208ENST00000488058 FAM217BQ9NTX9 383 aaPredicted RBP27.28■■□□□ 1.96
RNF38-208ENST00000488058 SCN10AQ9Y5Y9 1956 aa27.28■■□□□ 1.96
RNF38-208ENST00000488058 GGPS1O95749 300 aa27.27■■□□□ 1.96
RNF38-208ENST00000488058 ADD1P35611 737 aaKnown RBP27.27■■□□□ 1.96
RNF38-208ENST00000488058 NAPAP54920 295 aa27.27■■□□□ 1.96
RNF38-208ENST00000488058 MRPS9P82933 396 aaKnown RBP27.27■■□□□ 1.96
RNF38-208ENST00000488058 LAMC2Q13753 1193 aa27.27■■□□□ 1.96
RNF38-208ENST00000488058 GNPTABQ3T906 1256 aa27.27■■□□□ 1.96
RNF38-208ENST00000488058 ALDH8A1Q9H2A2 487 aaPredicted RBP27.27■■□□□ 1.96
RNF38-208ENST00000488058 UBA1P22314 1058 aaKnown RBP27.26■■□□□ 1.95
RNF38-208ENST00000488058 CYP2C18P33260 490 aa27.26■■□□□ 1.95
RNF38-208ENST00000488058 EPHB4P54760 987 aa27.26■■□□□ 1.95
RNF38-208ENST00000488058 FUT2Q10981 343 aa27.26■■□□□ 1.95
RNF38-208ENST00000488058 MFSD5Q6N075 450 aa27.26■■□□□ 1.95
RNF38-208ENST00000488058 RUFY3Q7L099 469 aa27.26■■□□□ 1.95
RNF38-208ENST00000488058 HIPK3Q9H422 1215 aa27.26■■□□□ 1.95
RNF38-208ENST00000488058 TRMT13Q9NUP7 481 aaKnown RBP27.26■■□□□ 1.95
RNF38-208ENST00000488058 RANBP2P49792 3224 aaKnown RBP27.26■■□□□ 1.95
RNF38-208ENST00000488058 CCDC196A0A1B0GTZ2 297 aa27.25■■□□□ 1.95
RNF38-208ENST00000488058 SPDYE3A6NKU9 549 aa27.25■■□□□ 1.95
RNF38-208ENST00000488058 DGKDQ16760 1214 aa27.25■■□□□ 1.95
RNF38-208ENST00000488058 TMEM199Q8N511 208 aa27.25■■□□□ 1.95
RNF38-208ENST00000488058 EMID1Q96A84 441 aaPredicted RBP27.25■■□□□ 1.95
RNF38-208ENST00000488058 SPATA33Q96N06 139 aa27.25■■□□□ 1.95
RNF38-208ENST00000488058 MLXIPQ9HAP2 919 aa27.25■■□□□ 1.95
RNF38-208ENST00000488058 CYP46A1Q9Y6A2 500 aa27.25■■□□□ 1.95
RNF38-208ENST00000488058 STAM2O75886 525 aa27.24■■□□□ 1.95
RNF38-208ENST00000488058 SP2Q02086 613 aa27.24■■□□□ 1.95
RNF38-208ENST00000488058 CELF3Q5SZQ8 465 aaKnown RBP27.24■■□□□ 1.95
RNF38-208ENST00000488058 PCNX4Q63HM2 1172 aa27.24■■□□□ 1.95
RNF38-208ENST00000488058 PPTC7Q8NI37 304 aa27.24■■□□□ 1.95
RNF38-208ENST00000488058 UMODL1Q5DID0 1318 aa27.23■■□□□ 1.95
RNF38-208ENST00000488058 TGFB3P10600 412 aa27.23■■□□□ 1.95
RNF38-208ENST00000488058 PPIGQ13427 754 aaKnown RBP eCLIP27.23■■□□□ 1.95
RNF38-208ENST00000488058 MYSM1Q5VVJ2 828 aa27.23■■□□□ 1.95
RNF38-208ENST00000488058 TYW1BQ6NUM6 668 aa27.23■■□□□ 1.95
RNF38-208ENST00000488058 NFRKBQ6P4R8 1299 aa27.23■■□□□ 1.95
RNF38-208ENST00000488058 INPP4AQ96PE3 977 aaPredicted RBP27.23■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms