RNA–Protein interactions for RNA: ENST00000487747.5

SMC4-219, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-219ENST00000487747 ECI1P42126 302 aa7.14□□□□□ -1.27
SMC4-219ENST00000487747 EFEMP1Q12805 493 aa7.14□□□□□ -1.27
SMC4-219ENST00000487747 SV2CQ496J9 727 aa7.14□□□□□ -1.27
SMC4-219ENST00000487747 ETV3LQ6ZN32 361 aa7.14□□□□□ -1.27
SMC4-219ENST00000487747 CEP68Q76N32 757 aa7.14□□□□□ -1.27
SMC4-219ENST00000487747 DCP2Q8IU60 420 aaKnown RBP7.14□□□□□ -1.27
SMC4-219ENST00000487747 LNPKQ9C0E8 428 aa7.14□□□□□ -1.27
SMC4-219ENST00000487747 ACTR10Q9NZ32 417 aa7.14□□□□□ -1.27
SMC4-219ENST00000487747 PALD1Q9ULE6 856 aa7.14□□□□□ -1.27
SMC4-219ENST00000487747 SUSD5O60279 629 aa7.13□□□□□ -1.27
SMC4-219ENST00000487747 NAT2P11245 290 aa7.13□□□□□ -1.27
SMC4-219ENST00000487747 LCP1P13796 627 aa7.13□□□□□ -1.27
SMC4-219ENST00000487747 STAT5AP42229 794 aa7.13□□□□□ -1.27
SMC4-219ENST00000487747 CD300LDQ6UXZ3 194 aa7.13□□□□□ -1.27
SMC4-219ENST00000487747 MILR1Q7Z6M3 343 aa7.13□□□□□ -1.27
SMC4-219ENST00000487747 MIB1Q86YT6 1006 aa7.13□□□□□ -1.27
SMC4-219ENST00000487747 RCBTB1Q8NDN9 531 aa7.13□□□□□ -1.27
SMC4-219ENST00000487747 AP5M1Q9H0R1 490 aa7.13□□□□□ -1.27
SMC4-219ENST00000487747 TIMM13Q9Y5L4 95 aaPredicted RBP7.13□□□□□ -1.27
SMC4-219ENST00000487747 SNRPB2P08579 225 aaKnown RBP7.12□□□□□ -1.27
SMC4-219ENST00000487747 THBS2P35442 1172 aa7.12□□□□□ -1.27
SMC4-219ENST00000487747 RPL11P62913 178 aaKnown RBP7.12□□□□□ -1.27
SMC4-219ENST00000487747 ERICH6BQ5W0A0 696 aa7.12□□□□□ -1.27
SMC4-219ENST00000487747 HOMEZQ8IX15 550 aa7.12□□□□□ -1.27
SMC4-219ENST00000487747 Q8N1Y9 231 aa7.12□□□□□ -1.27
SMC4-219ENST00000487747 ADAMTS17Q8TE56 1095 aa7.12□□□□□ -1.27
SMC4-219ENST00000487747 SEC14L1Q92503 715 aa7.12□□□□□ -1.27
SMC4-219ENST00000487747 DIO2Q92813 273 aa7.12□□□□□ -1.27
SMC4-219ENST00000487747 CAPN10Q9HC96 672 aa7.12□□□□□ -1.27
SMC4-219ENST00000487747 DDAH1O94760 285 aa7.11□□□□□ -1.27
SMC4-219ENST00000487747 SCG5P05408 212 aa7.11□□□□□ -1.27
SMC4-219ENST00000487747 SSBP05455 408 aaKnown RBP eCLIP7.11□□□□□ -1.279e-17■■■■■ 55.5
SMC4-219ENST00000487747 ADRB1P08588 477 aa7.11□□□□□ -1.27
SMC4-219ENST00000487747 ERCC5P28715 1186 aaPredicted RBP7.11□□□□□ -1.27
SMC4-219ENST00000487747 HOXC12P31275 282 aa7.11□□□□□ -1.27
SMC4-219ENST00000487747 GRIA2P42262 883 aa7.11□□□□□ -1.27
SMC4-219ENST00000487747 GJA9P57773 515 aa7.11□□□□□ -1.27
SMC4-219ENST00000487747 HHIPL2Q6UWX4 724 aa7.11□□□□□ -1.27
SMC4-219ENST00000487747 TTLL7Q6ZT98 887 aa7.11□□□□□ -1.27
SMC4-219ENST00000487747 TRMT2BQ96GJ1 504 aaKnown RBP7.11□□□□□ -1.27
SMC4-219ENST00000487747 LRP2BPQ9P2M1 347 aa7.11□□□□□ -1.27
SMC4-219ENST00000487747 X6R8D5 127 aa7.11□□□□□ -1.27
SMC4-219ENST00000487747 SMARCA5O60264 1052 aaPredicted RBP7.1□□□□□ -1.27
SMC4-219ENST00000487747 CAPNS1P04632 268 aa7.1□□□□□ -1.27
SMC4-219ENST00000487747 SLC6A11P48066 632 aa7.1□□□□□ -1.27
SMC4-219ENST00000487747 ITGA1P56199 1179 aa7.1□□□□□ -1.27
SMC4-219ENST00000487747 CR1LQ2VPA4 569 aa7.1□□□□□ -1.27
SMC4-219ENST00000487747 E4F1Q66K89 784 aaPredicted RBP7.1□□□□□ -1.27
SMC4-219ENST00000487747 IQCEQ6IPM2 695 aa7.1□□□□□ -1.27
SMC4-219ENST00000487747 DBX2Q6ZNG2 339 aa7.1□□□□□ -1.27
SMC4-219ENST00000487747 RIOX2Q8IUF8 465 aa7.1□□□□□ -1.27
SMC4-219ENST00000487747 KYQ8NBH2 561 aa7.1□□□□□ -1.27
SMC4-219ENST00000487747 TMEM145Q8NBT3 493 aa7.1□□□□□ -1.27
SMC4-219ENST00000487747 PRKAG3Q9UGI9 489 aa7.1□□□□□ -1.27
SMC4-219ENST00000487747 MEFVO15553 781 aaPredicted RBP7.09□□□□□ -1.27
SMC4-219ENST00000487747 RPL13P26373 211 aaKnown RBP7.09□□□□□ -1.27
SMC4-219ENST00000487747 KCNJ6P48051 423 aa7.09□□□□□ -1.27
SMC4-219ENST00000487747 GFRA1P56159 465 aa7.09□□□□□ -1.27
SMC4-219ENST00000487747 RGL3Q3MIN7 710 aa7.09□□□□□ -1.27
SMC4-219ENST00000487747 SPATS1Q496A3 300 aa7.09□□□□□ -1.27
SMC4-219ENST00000487747 PRR31Q5SQ13 230 aa7.09□□□□□ -1.27
SMC4-219ENST00000487747 MROH9Q5TGP6 573 aa7.09□□□□□ -1.27
SMC4-219ENST00000487747 MCTP2Q6DN12 878 aa7.09□□□□□ -1.27
SMC4-219ENST00000487747 FAM126BQ8IXS8 530 aa7.09□□□□□ -1.27
SMC4-219ENST00000487747 PPIL6Q8IXY8 311 aa7.09□□□□□ -1.27
SMC4-219ENST00000487747 C1orf159Q96HA4 380 aa7.09□□□□□ -1.27
SMC4-219ENST00000487747 TMEM169Q96HH4 297 aa7.09□□□□□ -1.27
SMC4-219ENST00000487747 RBM15Q96T37 977 aaKnown RBP eCLIP7.09□□□□□ -1.275e-67■■■■■ 212.6
SMC4-219ENST00000487747 KRTAP9-8Q9BYQ0 159 aa7.09□□□□□ -1.27
SMC4-219ENST00000487747 ZNF408Q9H9D4 720 aa7.09□□□□□ -1.27
SMC4-219ENST00000487747 PCDHA2Q9Y5H9 948 aa7.09□□□□□ -1.27
SMC4-219ENST00000487747 K7ESM1 405 aa7.08□□□□□ -1.28
SMC4-219ENST00000487747 GJB6O95452 261 aa7.08□□□□□ -1.28
SMC4-219ENST00000487747 ADAM9Q13443 819 aa7.08□□□□□ -1.28
SMC4-219ENST00000487747 TNNI3KQ59H18 835 aa7.08□□□□□ -1.28
SMC4-219ENST00000487747 ARRDC4Q8NCT1 418 aa7.08□□□□□ -1.28
SMC4-219ENST00000487747 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.08□□□□□ -1.289e-7■■■■■ 161.6
SMC4-219ENST00000487747 DDX3XO00571 662 aaKnown RBP eCLIP7.07□□□□□ -1.284e-78■■■■■ 527.9
SMC4-219ENST00000487747 FGRP09769 529 aa7.07□□□□□ -1.28
SMC4-219ENST00000487747 KCNAB2Q13303 367 aa7.07□□□□□ -1.28
SMC4-219ENST00000487747 TESK1Q15569 626 aa7.07□□□□□ -1.28
SMC4-219ENST00000487747 VPS37DQ86XT2 251 aa7.07□□□□□ -1.28
SMC4-219ENST00000487747 ZNF428Q96B54 188 aa7.07□□□□□ -1.28
SMC4-219ENST00000487747 CHAMP1Q96JM3 812 aa7.07□□□□□ -1.28
SMC4-219ENST00000487747 WASF3Q9UPY6 502 aa7.07□□□□□ -1.28
SMC4-219ENST00000487747 ITGB3P05106 788 aa7.06□□□□□ -1.28
SMC4-219ENST00000487747 INSRRP14616 1297 aa7.06□□□□□ -1.28
SMC4-219ENST00000487747 LTBRP36941 435 aa7.06□□□□□ -1.28
SMC4-219ENST00000487747 FXNQ16595 210 aa7.06□□□□□ -1.28
SMC4-219ENST00000487747 SLC10A6Q3KNW5 377 aa7.06□□□□□ -1.28
SMC4-219ENST00000487747 SLC35F1Q5T1Q4 408 aa7.06□□□□□ -1.28
SMC4-219ENST00000487747 ACBD5Q5T8D3 534 aaPredicted RBP7.06□□□□□ -1.28
SMC4-219ENST00000487747 MCF2L2Q86YR7 1114 aa7.06□□□□□ -1.28
SMC4-219ENST00000487747 CELF2-AS1Q8N7Q2 184 aa7.06□□□□□ -1.28
SMC4-219ENST00000487747 TXNDC5Q8NBS9 432 aaKnown RBP7.06□□□□□ -1.28
SMC4-219ENST00000487747 CDIP1Q9H305 208 aa7.06□□□□□ -1.28
SMC4-219ENST00000487747 MYO1BO43795 1136 aa7.05□□□□□ -1.28
SMC4-219ENST00000487747 CPP00450 1065 aa7.05□□□□□ -1.28
SMC4-219ENST00000487747 LSAMPQ13449 338 aa7.05□□□□□ -1.28
SMC4-219ENST00000487747 TBC1D10BQ4KMP7 808 aaPredicted RBP7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms