RNA–Protein interactions for RNA: ENST00000487689.1

UBR3-211, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 3

Gene UBR3, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-211ENST00000487689 MMP19Q99542 508 aa6.33□□□□□ -1.4
UBR3-211ENST00000487689 MTA3Q9BTC8 594 aa6.33□□□□□ -1.4
UBR3-211ENST00000487689 C1QTNF3Q9BXJ4 246 aa6.33□□□□□ -1.4
UBR3-211ENST00000487689 EMC9Q9Y3B6 208 aa6.33□□□□□ -1.4
UBR3-211ENST00000487689 SSBP05455 408 aaKnown RBP eCLIP6.32□□□□□ -1.4
UBR3-211ENST00000487689 GTF2A2P52657 109 aa6.32□□□□□ -1.4
UBR3-211ENST00000487689 RPL11P62913 178 aaKnown RBP6.32□□□□□ -1.4
UBR3-211ENST00000487689 GNL2Q13823 731 aaKnown RBP6.32□□□□□ -1.4
UBR3-211ENST00000487689 SEC14L1Q92503 715 aa6.32□□□□□ -1.4
UBR3-211ENST00000487689 NGRNQ9NPE2 291 aaKnown RBP6.32□□□□□ -1.4
UBR3-211ENST00000487689 CYP26B1Q9NR63 512 aa6.32□□□□□ -1.4
UBR3-211ENST00000487689 PLA2G2DQ9UNK4 145 aa6.32□□□□□ -1.4
UBR3-211ENST00000487689 COA3Q9Y2R0 106 aaPredicted RBP6.32□□□□□ -1.4
UBR3-211ENST00000487689 C22orf46C9J442 243 aa6.31□□□□□ -1.4
UBR3-211ENST00000487689 TACR2P21452 398 aa6.31□□□□□ -1.4
UBR3-211ENST00000487689 DLX2Q07687 328 aaPredicted RBP6.31□□□□□ -1.4
UBR3-211ENST00000487689 SV2CQ496J9 727 aa6.31□□□□□ -1.4
UBR3-211ENST00000487689 GTF2IRD2BQ6EKJ0 949 aa6.31□□□□□ -1.4
UBR3-211ENST00000487689 CD300LDQ6UXZ3 194 aa6.31□□□□□ -1.4
UBR3-211ENST00000487689 GTF2IRD2Q86UP8 949 aa6.31□□□□□ -1.4
UBR3-211ENST00000487689 SAMD11Q96NU1 681 aa6.31□□□□□ -1.4
UBR3-211ENST00000487689 GPRC5CQ9NQ84 441 aa6.31□□□□□ -1.4
UBR3-211ENST00000487689 APEX2Q9UBZ4 518 aa6.31□□□□□ -1.4
UBR3-211ENST00000487689 THBDP07204 575 aa6.3□□□□□ -1.4
UBR3-211ENST00000487689 KIAA2012Q0VF49 1180 aa6.3□□□□□ -1.4
UBR3-211ENST00000487689 CHRNA2Q15822 529 aa6.3□□□□□ -1.4
UBR3-211ENST00000487689 MROH9Q5TGP6 573 aa6.3□□□□□ -1.4
UBR3-211ENST00000487689 LARP1BQ659C4 914 aaKnown RBP6.3□□□□□ -1.4
UBR3-211ENST00000487689 E4F1Q66K89 784 aaPredicted RBP6.3□□□□□ -1.4
UBR3-211ENST00000487689 BORAQ6PGQ7 559 aa6.3□□□□□ -1.4
UBR3-211ENST00000487689 TRIM59Q8IWR1 403 aa6.3□□□□□ -1.4
UBR3-211ENST00000487689 ZFPM1Q8IX07 1006 aa6.3□□□□□ -1.4
UBR3-211ENST00000487689 HOMEZQ8IX15 550 aa6.3□□□□□ -1.4
UBR3-211ENST00000487689 Q8N1X5 172 aa6.3□□□□□ -1.4
UBR3-211ENST00000487689 TTC9BQ8N6N2 239 aa6.3□□□□□ -1.4
UBR3-211ENST00000487689 TTLL6Q8N841 843 aa6.3□□□□□ -1.4
UBR3-211ENST00000487689 COPS5Q92905 334 aa6.3□□□□□ -1.4
UBR3-211ENST00000487689 TRMT2BQ96GJ1 504 aaKnown RBP6.3□□□□□ -1.4
UBR3-211ENST00000487689 SLITRK6Q9H5Y7 841 aa6.3□□□□□ -1.4
UBR3-211ENST00000487689 ACTR10Q9NZ32 417 aa6.3□□□□□ -1.4
UBR3-211ENST00000487689 TIMM13Q9Y5L4 95 aaPredicted RBP6.3□□□□□ -1.4
UBR3-211ENST00000487689 RB1CC1Q8TDY2 1594 aa6.3□□□□□ -1.4
UBR3-211ENST00000487689 CC2D2AQ9P2K1 1620 aa6.29□□□□□ -1.4
UBR3-211ENST00000487689 MEFVO15553 781 aaPredicted RBP6.29□□□□□ -1.4
UBR3-211ENST00000487689 SNRPB2P08579 225 aaKnown RBP6.29□□□□□ -1.4
UBR3-211ENST00000487689 KCNJ6P48051 423 aa6.29□□□□□ -1.4
UBR3-211ENST00000487689 KCNAB2Q13303 367 aa6.29□□□□□ -1.4
UBR3-211ENST00000487689 SMAD4Q13485 552 aaKnown RBP6.29□□□□□ -1.4
UBR3-211ENST00000487689 MILR1Q7Z6M3 343 aa6.29□□□□□ -1.4
UBR3-211ENST00000487689 TEX2Q8IWB9 1127 aa6.29□□□□□ -1.4
UBR3-211ENST00000487689 DIO2Q92813 273 aa6.29□□□□□ -1.4
UBR3-211ENST00000487689 CHAMP1Q96JM3 812 aa6.29□□□□□ -1.4
UBR3-211ENST00000487689 CCDC140Q96MF4 163 aa6.29□□□□□ -1.4
UBR3-211ENST00000487689 NKX2-4Q9H2Z4 354 aa6.29□□□□□ -1.4
UBR3-211ENST00000487689 ACBD3Q9H3P7 528 aa6.29□□□□□ -1.4
UBR3-211ENST00000487689 R3HCC1Q9Y3T6 440 aaKnown RBP6.29□□□□□ -1.4
UBR3-211ENST00000487689 AGRPO00253 132 aa6.28□□□□□ -1.4
UBR3-211ENST00000487689 PPP1R11O60927 126 aaPredicted RBP6.28□□□□□ -1.4
UBR3-211ENST00000487689 HOXC12P31275 282 aa6.28□□□□□ -1.4
UBR3-211ENST00000487689 ECI1P42126 302 aa6.28□□□□□ -1.4
UBR3-211ENST00000487689 CEP68Q76N32 757 aa6.28□□□□□ -1.4
UBR3-211ENST00000487689 TMEM169Q96HH4 297 aa6.28□□□□□ -1.4
UBR3-211ENST00000487689 FBLN5Q9UBX5 448 aa6.28□□□□□ -1.4
UBR3-211ENST00000487689 SIT1Q9Y3P8 196 aa6.28□□□□□ -1.4
UBR3-211ENST00000487689 CYR61O00622 381 aa6.27□□□□□ -1.41
UBR3-211ENST00000487689 DDAH1O94760 285 aa6.27□□□□□ -1.41
UBR3-211ENST00000487689 CPP00450 1065 aa6.27□□□□□ -1.41
UBR3-211ENST00000487689 SLC6A11P48066 632 aa6.27□□□□□ -1.41
UBR3-211ENST00000487689 NKX3-2P78367 333 aa6.27□□□□□ -1.41
UBR3-211ENST00000487689 FXNQ16595 210 aa6.27□□□□□ -1.41
UBR3-211ENST00000487689 CRB2Q5IJ48 1285 aa6.27□□□□□ -1.41
UBR3-211ENST00000487689 SPRED1Q7Z699 444 aa6.27□□□□□ -1.41
UBR3-211ENST00000487689 FAM169BQ8N8A8 192 aa6.27□□□□□ -1.41
UBR3-211ENST00000487689 KYQ8NBH2 561 aa6.27□□□□□ -1.41
UBR3-211ENST00000487689 PLEKHO2Q8TD55 490 aa6.27□□□□□ -1.41
UBR3-211ENST00000487689 ADAMTS17Q8TE56 1095 aa6.27□□□□□ -1.41
UBR3-211ENST00000487689 NOX5Q96PH1 765 aa6.27□□□□□ -1.41
UBR3-211ENST00000487689 SMAD7O15105 426 aaKnown RBP6.26□□□□□ -1.41
UBR3-211ENST00000487689 CYP7B1O75881 506 aa6.26□□□□□ -1.41
UBR3-211ENST00000487689 ATF4P18848 351 aaPredicted RBP6.26□□□□□ -1.41
UBR3-211ENST00000487689 ACVRL1P37023 503 aa6.26□□□□□ -1.41
UBR3-211ENST00000487689 ZNF761Q86XN6 746 aaPredicted RBP6.26□□□□□ -1.41
UBR3-211ENST00000487689 RIOX2Q8IUF8 465 aa6.26□□□□□ -1.41
UBR3-211ENST00000487689 FAM178BQ8IXR5 827 aa6.26□□□□□ -1.41
UBR3-211ENST00000487689 LGI4Q8N135 537 aa6.26□□□□□ -1.41
UBR3-211ENST00000487689 CHST13Q8NET6 341 aa6.26□□□□□ -1.41
UBR3-211ENST00000487689 SH3RF3Q8TEJ3 882 aaPredicted RBP6.26□□□□□ -1.41
UBR3-211ENST00000487689 BTN2A2Q8WVV5 523 aa6.26□□□□□ -1.41
UBR3-211ENST00000487689 DVL3Q92997 716 aaPredicted RBP6.26□□□□□ -1.41
UBR3-211ENST00000487689 C11orf84Q9BUA3 381 aaPredicted RBP6.26□□□□□ -1.41
UBR3-211ENST00000487689 ZNF536O15090 1300 aa6.25□□□□□ -1.41
UBR3-211ENST00000487689 MAFKO60675 156 aa6.25□□□□□ -1.41
UBR3-211ENST00000487689 PLATP00750 562 aa6.25□□□□□ -1.41
UBR3-211ENST00000487689 C8BP07358 591 aa6.25□□□□□ -1.41
UBR3-211ENST00000487689 RPL13P26373 211 aaKnown RBP6.25□□□□□ -1.41
UBR3-211ENST00000487689 RGL3Q3MIN7 710 aa6.25□□□□□ -1.41
UBR3-211ENST00000487689 TBC1D10BQ4KMP7 808 aaPredicted RBP6.25□□□□□ -1.41
UBR3-211ENST00000487689 FAM26FQ5R3K3 315 aa6.25□□□□□ -1.41
UBR3-211ENST00000487689 PRAMEF18Q5VWM3 479 aa6.25□□□□□ -1.41
UBR3-211ENST00000487689 C6orf15Q6UXA7 325 aaPredicted RBP6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms