RNA–Protein interactions for RNA: ENST00000487485.1

TOP3B-216, Transcript of DNA topoisomerase III beta, humanhuman

TSL 3

Gene TOP3B, Length 725 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-216ENST00000487485 POLR2MP0CAP2 368 aa12.27□□□□□ -0.45
TOP3B-216ENST00000487485 COL9A1P20849 921 aa12.27□□□□□ -0.45
TOP3B-216ENST00000487485 HSD17B4P51659 736 aa12.27□□□□□ -0.45
TOP3B-216ENST00000487485 CNTN2Q02246 1040 aa12.27□□□□□ -0.45
TOP3B-216ENST00000487485 C1orf53Q5VUE5 145 aa12.27□□□□□ -0.45
TOP3B-216ENST00000487485 PPP1R18Q6NYC8 613 aa12.27□□□□□ -0.45
TOP3B-216ENST00000487485 SLC30A10Q6XR72 485 aa12.27□□□□□ -0.45
TOP3B-216ENST00000487485 FAM133AQ8N9E0 248 aa12.27□□□□□ -0.45
TOP3B-216ENST00000487485 SMARCC2Q8TAQ2 1214 aa12.27□□□□□ -0.45
TOP3B-216ENST00000487485 CCDC12Q8WUD4 166 aaPredicted RBP12.27□□□□□ -0.45
TOP3B-216ENST00000487485 WASF1Q92558 559 aa12.27□□□□□ -0.45
TOP3B-216ENST00000487485 AIFM3Q96NN9 605 aa12.27□□□□□ -0.45
TOP3B-216ENST00000487485 PURBQ96QR8 312 aaKnown RBP12.27□□□□□ -0.45
TOP3B-216ENST00000487485 PSTPIP2Q9H939 334 aa12.27□□□□□ -0.45
TOP3B-216ENST00000487485 SH3GLB2Q9NR46 395 aa12.27□□□□□ -0.45
TOP3B-216ENST00000487485 DIS3Q9Y2L1 958 aaKnown RBP12.27□□□□□ -0.45
TOP3B-216ENST00000487485 SOWAHBA6NEL2 793 aa12.26□□□□□ -0.45
TOP3B-216ENST00000487485 K7ELQ4 463 aaPredicted RBP12.26□□□□□ -0.45
TOP3B-216ENST00000487485 MEIS2O14770 477 aa12.26□□□□□ -0.45
TOP3B-216ENST00000487485 HOXA13P31271 388 aaPredicted RBP12.26□□□□□ -0.45
TOP3B-216ENST00000487485 MRPL12P52815 198 aaKnown RBP12.26□□□□□ -0.45
TOP3B-216ENST00000487485 GHRHRQ02643 423 aa12.26□□□□□ -0.45
TOP3B-216ENST00000487485 TJAP1Q5JTD0 557 aa12.26□□□□□ -0.45
TOP3B-216ENST00000487485 USP17L6PQ6QN14 398 aa12.26□□□□□ -0.45
TOP3B-216ENST00000487485 HSCBQ8IWL3 235 aa12.26□□□□□ -0.45
TOP3B-216ENST00000487485 SYTL5Q8TDW5 730 aaPredicted RBP12.26□□□□□ -0.45
TOP3B-216ENST00000487485 CUL5Q93034 780 aa12.26□□□□□ -0.45
TOP3B-216ENST00000487485 MAML3Q96JK9 1138 aa12.26□□□□□ -0.45
TOP3B-216ENST00000487485 TAAR1Q96RJ0 339 aa12.26□□□□□ -0.45
TOP3B-216ENST00000487485 ALG1Q9BT22 464 aa12.26□□□□□ -0.45
TOP3B-216ENST00000487485 VPS54Q9P1Q0 977 aa12.26□□□□□ -0.45
TOP3B-216ENST00000487485 RAPGEFL1Q9UHV5 662 aa12.26□□□□□ -0.45
TOP3B-216ENST00000487485 PHF24Q9UPV7 400 aa12.26□□□□□ -0.45
TOP3B-216ENST00000487485 MCM3APO60318 1980 aa12.25□□□□□ -0.45
TOP3B-216ENST00000487485 TMEM265A0A087WTH1 108 aa12.25□□□□□ -0.45
TOP3B-216ENST00000487485 PIK3CDO00329 1044 aa12.25□□□□□ -0.45
TOP3B-216ENST00000487485 KIAA0355O15063 1070 aa12.25□□□□□ -0.45
TOP3B-216ENST00000487485 CLTBP09497 229 aa12.25□□□□□ -0.45
TOP3B-216ENST00000487485 XBP1P17861 261 aa12.25□□□□□ -0.45
TOP3B-216ENST00000487485 ADCY7P51828 1080 aa12.25□□□□□ -0.45
TOP3B-216ENST00000487485 HMGN5P82970 282 aaKnown RBP12.25□□□□□ -0.45
TOP3B-216ENST00000487485 CUL4AQ13619 759 aa12.25□□□□□ -0.45
TOP3B-216ENST00000487485 CCDC148Q8NFR7 591 aa12.25□□□□□ -0.45
TOP3B-216ENST00000487485 FGD4Q96M96 766 aa12.25□□□□□ -0.45
TOP3B-216ENST00000487485 ZMYND12Q9H0C1 365 aa12.25□□□□□ -0.45
TOP3B-216ENST00000487485 GLT8D2Q9H1C3 349 aa12.25□□□□□ -0.45
TOP3B-216ENST00000487485 C6orf50Q9HD87 102 aa12.25□□□□□ -0.45
TOP3B-216ENST00000487485 RIC8AQ9NPQ8 531 aa12.25□□□□□ -0.45
TOP3B-216ENST00000487485 COL20A1Q9P218 1284 aa12.25□□□□□ -0.45
TOP3B-216ENST00000487485 ADD3Q9UEY8 706 aaKnown RBP12.25□□□□□ -0.45
TOP3B-216ENST00000487485 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.25□□□□□ -0.45
TOP3B-216ENST00000487485 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.24□□□□□ -0.45
TOP3B-216ENST00000487485 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.24□□□□□ -0.45
TOP3B-216ENST00000487485 ESYT2A0FGR8 921 aa12.24□□□□□ -0.45
TOP3B-216ENST00000487485 TNFRSF10AO00220 468 aa12.24□□□□□ -0.45
TOP3B-216ENST00000487485 PQBP1O60828 265 aaKnown RBP12.24□□□□□ -0.45
TOP3B-216ENST00000487485 PGK1P00558 417 aa12.24□□□□□ -0.45
TOP3B-216ENST00000487485 RAG1P15918 1043 aa12.24□□□□□ -0.45
TOP3B-216ENST00000487485 DNAJB2P25686 324 aa12.24□□□□□ -0.45
TOP3B-216ENST00000487485 GNA11P29992 359 aa12.24□□□□□ -0.45
TOP3B-216ENST00000487485 ALDH5A1P51649 535 aaPredicted RBP12.24□□□□□ -0.45
TOP3B-216ENST00000487485 NLRP5P59047 1200 aa12.24□□□□□ -0.45
TOP3B-216ENST00000487485 UBE2SQ16763 222 aa12.24□□□□□ -0.45
TOP3B-216ENST00000487485 ZNF467Q7Z7K2 595 aaPredicted RBP12.24□□□□□ -0.45
TOP3B-216ENST00000487485 FCHSD1Q86WN1 690 aa12.24□□□□□ -0.45
TOP3B-216ENST00000487485 FAM177A1Q8N128 213 aaPredicted RBP12.24□□□□□ -0.45
TOP3B-216ENST00000487485 FAM184AQ8NB25 1140 aa12.24□□□□□ -0.45
TOP3B-216ENST00000487485 DNERQ8NFT8 737 aa12.24□□□□□ -0.45
TOP3B-216ENST00000487485 RMDN3Q96TC7 470 aa12.24□□□□□ -0.45
TOP3B-216ENST00000487485 TINF2Q9BSI4 451 aa12.24□□□□□ -0.45
TOP3B-216ENST00000487485 XPNPEP3Q9NQH7 507 aa12.24□□□□□ -0.45
TOP3B-216ENST00000487485 GJB4Q9NTQ9 266 aa12.24□□□□□ -0.45
TOP3B-216ENST00000487485 KCNJ14Q9UNX9 436 aa12.24□□□□□ -0.45
TOP3B-216ENST00000487485 CHD9Q3L8U1 2897 aa12.23□□□□□ -0.45
TOP3B-216ENST00000487485 ASTN1O14525 1302 aa12.23□□□□□ -0.45
TOP3B-216ENST00000487485 ASB14A6NK59 587 aa12.23□□□□□ -0.45
TOP3B-216ENST00000487485 ADAMTS3O15072 1205 aa12.23□□□□□ -0.45
TOP3B-216ENST00000487485 RARBP10826 455 aa12.23□□□□□ -0.45
TOP3B-216ENST00000487485 GJB2P29033 226 aa12.23□□□□□ -0.45
TOP3B-216ENST00000487485 FOSBP53539 338 aa12.23□□□□□ -0.45
TOP3B-216ENST00000487485 FPGSQ05932 587 aa12.23□□□□□ -0.45
TOP3B-216ENST00000487485 ARHGEF16Q5VV41 709 aa12.23□□□□□ -0.45
TOP3B-216ENST00000487485 MAMDC4Q6UXC1 1216 aa12.23□□□□□ -0.45
TOP3B-216ENST00000487485 TEX2Q8IWB9 1127 aa12.23□□□□□ -0.45
TOP3B-216ENST00000487485 MSL3Q8N5Y2 521 aaKnown RBP12.23□□□□□ -0.45
TOP3B-216ENST00000487485 BICD2Q8TD16 824 aa12.23□□□□□ -0.45
TOP3B-216ENST00000487485 NSUN6Q8TEA1 469 aaKnown RBP12.23□□□□□ -0.45
TOP3B-216ENST00000487485 PPM1EQ8WY54 764 aa12.23□□□□□ -0.45
TOP3B-216ENST00000487485 PHF20Q9BVI0 1012 aa12.23□□□□□ -0.45
TOP3B-216ENST00000487485 ZNF576Q9H609 170 aa12.23□□□□□ -0.45
TOP3B-216ENST00000487485 TMEM39AQ9NV64 488 aa12.23□□□□□ -0.45
TOP3B-216ENST00000487485 PCDHA6Q9UN73 950 aa12.23□□□□□ -0.45
TOP3B-216ENST00000487485 SMC3Q9UQE7 1217 aa12.23□□□□□ -0.45
TOP3B-216ENST00000487485 PCDHA8Q9Y5H6 950 aa12.23□□□□□ -0.45
TOP3B-216ENST00000487485 SYNGAP1Q96PV0 1343 aa12.22□□□□□ -0.45
TOP3B-216ENST00000487485 KIAA1217Q5T5P2 1943 aa12.22□□□□□ -0.45
TOP3B-216ENST00000487485 LOC102724159A0A0B4J2E5 919 aa12.22□□□□□ -0.45
TOP3B-216ENST00000487485 A0A1W2PQ45 241 aaPredicted RBP12.22□□□□□ -0.45
TOP3B-216ENST00000487485 A0A1W2PQY0 241 aa12.22□□□□□ -0.45
TOP3B-216ENST00000487485 SPDYE3A6NKU9 549 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms