RNA–Protein interactions for RNA: ENST00000487461.1

VPS16-208, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 634 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-208ENST00000487461 CTAGE1Q96RT6 745 aa14.19□□□□□ -0.14
VPS16-208ENST00000487461 GAS2L1Q99501 681 aaPredicted RBP14.19□□□□□ -0.14
VPS16-208ENST00000487461 RIOX1Q9H6W3 641 aa14.19□□□□□ -0.14
VPS16-208ENST00000487461 SLC28A3Q9HAS3 691 aa14.19□□□□□ -0.14
VPS16-208ENST00000487461 PCDHA1Q9Y5I3 950 aa14.19□□□□□ -0.14
VPS16-208ENST00000487461 EYSQ5T1H1 3165 aa14.19□□□□□ -0.14
VPS16-208ENST00000487461 E7EWF7 191 aa14.18□□□□□ -0.14
VPS16-208ENST00000487461 PITPNM1O00562 1244 aa14.18□□□□□ -0.14
VPS16-208ENST00000487461 RGS20O76081 388 aa14.18□□□□□ -0.14
VPS16-208ENST00000487461 ATP2A2P16615 1042 aaKnown RBP14.18□□□□□ -0.14
VPS16-208ENST00000487461 CASTP20810 708 aaKnown RBP14.18□□□□□ -0.14
VPS16-208ENST00000487461 HOXA13P31271 388 aaPredicted RBP14.18□□□□□ -0.14
VPS16-208ENST00000487461 GDF6Q6KF10 455 aaPredicted RBP14.18□□□□□ -0.14
VPS16-208ENST00000487461 STOX1Q6ZVD7 989 aa14.18□□□□□ -0.14
VPS16-208ENST00000487461 PPM1EQ8WY54 764 aa14.18□□□□□ -0.14
VPS16-208ENST00000487461 PIGSQ96S52 555 aa14.18□□□□□ -0.14
VPS16-208ENST00000487461 PDCD2LQ9BRP1 358 aa14.18□□□□□ -0.14
VPS16-208ENST00000487461 PRDM6Q9NQX0 595 aa14.18□□□□□ -0.14
VPS16-208ENST00000487461 MAP3K20Q9NYL2 800 aaKnown RBP14.18□□□□□ -0.14
VPS16-208ENST00000487461 PRUNE2Q8WUY3 3088 aa14.18□□□□□ -0.14
VPS16-208ENST00000487461 SGSM2O43147 1006 aa14.17□□□□□ -0.14
VPS16-208ENST00000487461 CYTH3O43739 400 aa14.17□□□□□ -0.14
VPS16-208ENST00000487461 MYCLP12524 364 aaPredicted RBP14.17□□□□□ -0.14
VPS16-208ENST00000487461 RFC2P35250 354 aa14.17□□□□□ -0.14
VPS16-208ENST00000487461 TROAPQ12815 778 aa14.17□□□□□ -0.14
VPS16-208ENST00000487461 BFSP2Q13515 415 aa14.17□□□□□ -0.14
VPS16-208ENST00000487461 DGKDQ16760 1214 aa14.17□□□□□ -0.14
VPS16-208ENST00000487461 VSIG10LQ86VR7 867 aa14.17□□□□□ -0.14
VPS16-208ENST00000487461 SESTD1Q86VW0 696 aa14.17□□□□□ -0.14
VPS16-208ENST00000487461 HOMER1Q86YM7 354 aa14.17□□□□□ -0.14
VPS16-208ENST00000487461 EMID1Q96A84 441 aaPredicted RBP14.17□□□□□ -0.14
VPS16-208ENST00000487461 NOD1Q9Y239 953 aa14.17□□□□□ -0.14
VPS16-208ENST00000487461 PCDHA11Q9Y5I1 949 aa14.17□□□□□ -0.14
VPS16-208ENST00000487461 MRVI1Q9Y6F6 885 aa14.17□□□□□ -0.14
VPS16-208ENST00000487461 ANTXR2P58335 489 aa14.16□□□□□ -0.14
VPS16-208ENST00000487461 SP2Q02086 613 aa14.16□□□□□ -0.14
VPS16-208ENST00000487461 LAMC2Q13753 1193 aa14.16□□□□□ -0.14
VPS16-208ENST00000487461 GPNMBQ14956 572 aa14.16□□□□□ -0.14
VPS16-208ENST00000487461 WTAPQ15007 396 aa14.16□□□□□ -0.14
VPS16-208ENST00000487461 DHX37Q8IY37 1157 aaKnown RBP14.16□□□□□ -0.14
VPS16-208ENST00000487461 SAMD3Q8N6K7 520 aa14.16□□□□□ -0.14
VPS16-208ENST00000487461 NCOA7Q8NI08 942 aa14.16□□□□□ -0.14
VPS16-208ENST00000487461 IL31RAQ8NI17 732 aa14.16□□□□□ -0.14
VPS16-208ENST00000487461 IGDCC4Q8TDY8 1250 aa14.16□□□□□ -0.14
VPS16-208ENST00000487461 MAP4K1Q92918 833 aa14.16□□□□□ -0.14
VPS16-208ENST00000487461 ZFP91Q96JP5 570 aaPredicted RBP14.16□□□□□ -0.14
VPS16-208ENST00000487461 ALG1Q9BT22 464 aa14.16□□□□□ -0.14
VPS16-208ENST00000487461 FTOQ9C0B1 505 aaKnown RBP eCLIP14.16□□□□□ -0.14
VPS16-208ENST00000487461 HDAC6Q9UBN7 1215 aa14.16□□□□□ -0.14
VPS16-208ENST00000487461 BAZ2BQ9UIF8 2168 aaKnown RBP14.15□□□□□ -0.14
VPS16-208ENST00000487461 PNMA6FA0A0J9YX94 578 aa14.15□□□□□ -0.14
VPS16-208ENST00000487461 ERICH2A1L162 156 aa14.15□□□□□ -0.14
VPS16-208ENST00000487461 GCOM1H8Y6P7 765 aaPredicted RBP14.15□□□□□ -0.14
VPS16-208ENST00000487461 HAS3O00219 553 aa14.15□□□□□ -0.14
VPS16-208ENST00000487461 SORBS3O60504 671 aa14.15□□□□□ -0.14
VPS16-208ENST00000487461 POLR2MP0CAP2 368 aa14.15□□□□□ -0.14
VPS16-208ENST00000487461 ACTN1P12814 892 aa14.15□□□□□ -0.14
VPS16-208ENST00000487461 IGFBP4P22692 258 aa14.15□□□□□ -0.14
VPS16-208ENST00000487461 PSEN2P49810 448 aa14.15□□□□□ -0.14
VPS16-208ENST00000487461 PGM5Q15124 567 aa14.15□□□□□ -0.14
VPS16-208ENST00000487461 CCDC85BQ15834 202 aaPredicted RBP14.15□□□□□ -0.14
VPS16-208ENST00000487461 TMEM67Q5HYA8 995 aa14.15□□□□□ -0.14
VPS16-208ENST00000487461 MYSM1Q5VVJ2 828 aa14.15□□□□□ -0.14
VPS16-208ENST00000487461 PPP2R2DQ66LE6 453 aa14.15□□□□□ -0.14
VPS16-208ENST00000487461 RALYLQ86SE5 291 aaKnown RBP14.15□□□□□ -0.14
VPS16-208ENST00000487461 FCHSD1Q86WN1 690 aa14.15□□□□□ -0.14
VPS16-208ENST00000487461 PPTC7Q8NI37 304 aa14.15□□□□□ -0.14
VPS16-208ENST00000487461 DHX38Q92620 1227 aaKnown RBP14.15□□□□□ -0.14
VPS16-208ENST00000487461 GTF2IRD1Q9UHL9 959 aa14.15□□□□□ -0.14
VPS16-208ENST00000487461 SCN5AQ14524 2016 aa14.15□□□□□ -0.14
VPS16-208ENST00000487461 CHD9Q3L8U1 2897 aa14.14□□□□□ -0.15
VPS16-208ENST00000487461 MYH6P13533 1939 aa14.14□□□□□ -0.15
VPS16-208ENST00000487461 RBAK-RBAKDNI3L0D1 243 aa14.14□□□□□ -0.15
VPS16-208ENST00000487461 PPFIA4O75335 1185 aa14.14□□□□□ -0.15
VPS16-208ENST00000487461 ZNF286BP0CG31 522 aa14.14□□□□□ -0.15
VPS16-208ENST00000487461 HOXD8P13378 290 aaPredicted RBP14.14□□□□□ -0.15
VPS16-208ENST00000487461 MFSD10Q14728 455 aa14.14□□□□□ -0.15
VPS16-208ENST00000487461 CELF3Q5SZQ8 465 aaKnown RBP14.14□□□□□ -0.15
VPS16-208ENST00000487461 KCNV1Q6PIU1 500 aa14.14□□□□□ -0.15
VPS16-208ENST00000487461 MB21D2Q8IYB1 491 aaPredicted RBP14.14□□□□□ -0.15
VPS16-208ENST00000487461 C7orf31Q8N865 590 aa14.14□□□□□ -0.15
VPS16-208ENST00000487461 CAGE1Q8TC20 777 aa14.14□□□□□ -0.15
VPS16-208ENST00000487461 PHOSPHO2Q8TCD6 241 aa14.14□□□□□ -0.15
VPS16-208ENST00000487461 AFAP1L1Q8TED9 768 aa14.14□□□□□ -0.15
VPS16-208ENST00000487461 PIBF1Q8WXW3 757 aa14.14□□□□□ -0.15
VPS16-208ENST00000487461 GPKOWQ92917 476 aaPredicted RBP eCLIP14.14□□□□□ -0.15
VPS16-208ENST00000487461 RBM8AQ9Y5S9 174 aaKnown RBP14.14□□□□□ -0.15
VPS16-208ENST00000487461 VCANP13611 3396 aa14.14□□□□□ -0.15
VPS16-208ENST00000487461 TET1Q8NFU7 2136 aa14.14□□□□□ -0.15
VPS16-208ENST00000487461 KIAA1217Q5T5P2 1943 aa14.13□□□□□ -0.15
VPS16-208ENST00000487461 GGPS1O95749 300 aa14.13□□□□□ -0.15
VPS16-208ENST00000487461 F2P00734 622 aa14.13□□□□□ -0.15
VPS16-208ENST00000487461 CA3P07451 260 aa14.13□□□□□ -0.15
VPS16-208ENST00000487461 TGFB3P10600 412 aa14.13□□□□□ -0.15
VPS16-208ENST00000487461 SELPP16109 830 aa14.13□□□□□ -0.15
VPS16-208ENST00000487461 CCND2P30279 289 aa14.13□□□□□ -0.15
VPS16-208ENST00000487461 ZNF200P98182 395 aaPredicted RBP14.13□□□□□ -0.15
VPS16-208ENST00000487461 TRAF1Q13077 416 aa14.13□□□□□ -0.15
VPS16-208ENST00000487461 HIC1Q14526 733 aa14.13□□□□□ -0.15
VPS16-208ENST00000487461 SART3Q15020 963 aaKnown RBP14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms