RNA–Protein interactions for RNA: ENST00000487222.5

EPHB4-206, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 5,058 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-206ENST00000487222 IFT88Q13099 833 aa16.01■□□□□ 0.15
EPHB4-206ENST00000487222 PRKG1Q13976 671 aa16.01■□□□□ 0.15
EPHB4-206ENST00000487222 LRRC41Q15345 812 aa16.01■□□□□ 0.15
EPHB4-206ENST00000487222 DOK7Q18PE1 504 aa16.01■□□□□ 0.15
EPHB4-206ENST00000487222 SH2D4BQ5SQS7 431 aa16.01■□□□□ 0.15
EPHB4-206ENST00000487222 LCORLQ8N3X6 602 aa16.01■□□□□ 0.15
EPHB4-206ENST00000487222 SPZ1Q9BXG8 430 aa16.01■□□□□ 0.15
EPHB4-206ENST00000487222 HESX1Q9UBX0 185 aa16.01■□□□□ 0.15
EPHB4-206ENST00000487222 PCDHB6Q9Y5E3 794 aa16.01■□□□□ 0.15
EPHB4-206ENST00000487222 TMEM191BP0C7N4 346 aa16.01■□□□□ 0.15
EPHB4-206ENST00000487222 PDZD4Q76G19 769 aaPredicted RBP16.01■□□□□ 0.15
EPHB4-206ENST00000487222 HACE1Q8IYU2 909 aa16.01■□□□□ 0.15
EPHB4-206ENST00000487222 POMGNT1Q8WZA1 660 aa16.01■□□□□ 0.15
EPHB4-206ENST00000487222 PAGE5Q96GU1 130 aa16.01■□□□□ 0.15
EPHB4-206ENST00000487222 PBKQ96KB5 322 aa16.01■□□□□ 0.15
EPHB4-206ENST00000487222 PRKAB2O43741 272 aa16.01■□□□□ 0.15
EPHB4-206ENST00000487222 DYNLL1P63167 89 aaKnown RBP16.01■□□□□ 0.15
EPHB4-206ENST00000487222 ABCB5Q2M3G0 1257 aa16.01■□□□□ 0.15
EPHB4-206ENST00000487222 PI16Q6UXB8 463 aa16.01■□□□□ 0.15
EPHB4-206ENST00000487222 NHEJ1Q9H9Q4 299 aaPredicted RBP16.01■□□□□ 0.15
EPHB4-206ENST00000487222 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.01■□□□□ 0.15
EPHB4-206ENST00000487222 ATP1A3P13637 1013 aa16.01■□□□□ 0.15
EPHB4-206ENST00000487222 ARHGAP4P98171 946 aa16.01■□□□□ 0.15
EPHB4-206ENST00000487222 PPP2R5CQ13362 524 aa16.01■□□□□ 0.15
EPHB4-206ENST00000487222 SEPT2Q15019 361 aa16.01■□□□□ 0.15
EPHB4-206ENST00000487222 C10orf76Q5T2E6 689 aa16.01■□□□□ 0.15
EPHB4-206ENST00000487222 ARL6IP4Q66PJ3 421 aaKnown RBP16.01■□□□□ 0.15
EPHB4-206ENST00000487222 ARMC9Q7Z3E5 817 aa16.01■□□□□ 0.15
EPHB4-206ENST00000487222 ZNF408Q9H9D4 720 aa16.01■□□□□ 0.15
EPHB4-206ENST00000487222 IFNAR2P48551 515 aa16■□□□□ 0.15
EPHB4-206ENST00000487222 PSMD2Q13200 908 aa16■□□□□ 0.15
EPHB4-206ENST00000487222 TTLL1O95922 423 aa16■□□□□ 0.15
EPHB4-206ENST00000487222 EIF4A3P38919 411 aaKnown RBP16■□□□□ 0.15
EPHB4-206ENST00000487222 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16■□□□□ 0.15
EPHB4-206ENST00000487222 STAG1Q8WVM7 1258 aa16■□□□□ 0.15
EPHB4-206ENST00000487222 EVI5O60447 810 aa16■□□□□ 0.15
EPHB4-206ENST00000487222 SH3BGRP55822 239 aaPredicted RBP16■□□□□ 0.15
EPHB4-206ENST00000487222 CFAP61Q8NHU2 1237 aa16■□□□□ 0.15
EPHB4-206ENST00000487222 SEC31BQ9NQW1 1179 aa16■□□□□ 0.15
EPHB4-206ENST00000487222 GABPAQ06546 454 aa16■□□□□ 0.15
EPHB4-206ENST00000487222 C2orf54Q08AI8 447 aa16■□□□□ 0.15
EPHB4-206ENST00000487222 RPS6KA2Q15349 733 aa16■□□□□ 0.15
EPHB4-206ENST00000487222 MAP7D3Q8IWC1 876 aa16■□□□□ 0.15
EPHB4-206ENST00000487222 ADPGKQ9BRR6 497 aa16■□□□□ 0.15
EPHB4-206ENST00000487222 M0QZ92 97 aa15.99■□□□□ 0.15
EPHB4-206ENST00000487222 METTL13Q8N6R0 699 aa15.99■□□□□ 0.15
EPHB4-206ENST00000487222 SMCR8Q8TEV9 937 aaPredicted RBP15.99■□□□□ 0.15
EPHB4-206ENST00000487222 A0A087WUV0 522 aaPredicted RBP15.99■□□□□ 0.15
EPHB4-206ENST00000487222 CDC25AP30304 524 aa15.99■□□□□ 0.15
EPHB4-206ENST00000487222 PLTPP55058 493 aa15.99■□□□□ 0.15
EPHB4-206ENST00000487222 CASP8Q14790 479 aa15.99■□□□□ 0.15
EPHB4-206ENST00000487222 ALS2CLQ60I27 953 aa15.99■□□□□ 0.15
EPHB4-206ENST00000487222 KAZNQ674X7 775 aa15.99■□□□□ 0.15
EPHB4-206ENST00000487222 FBXO38Q6PIJ6 1188 aa15.99■□□□□ 0.15
EPHB4-206ENST00000487222 TMC4Q7Z404 712 aa15.99■□□□□ 0.15
EPHB4-206ENST00000487222 AIFM3Q96NN9 605 aa15.99■□□□□ 0.15
EPHB4-206ENST00000487222 WDR11Q9BZH6 1224 aa15.99■□□□□ 0.15
EPHB4-206ENST00000487222 NACA2Q9H009 215 aa15.99■□□□□ 0.15
EPHB4-206ENST00000487222 VCX3AQ9NNX9 186 aa15.99■□□□□ 0.15
EPHB4-206ENST00000487222 ATP8A1Q9Y2Q0 1164 aa15.99■□□□□ 0.15
EPHB4-206ENST00000487222 PTPN22Q9Y2R2 807 aa15.99■□□□□ 0.15
EPHB4-206ENST00000487222 ABCC3O15438 1527 aa15.99■□□□□ 0.15
EPHB4-206ENST00000487222 HNRNPDLO14979 420 aaKnown RBP15.99■□□□□ 0.15
EPHB4-206ENST00000487222 NT5C2P49902 561 aa15.99■□□□□ 0.15
EPHB4-206ENST00000487222 TRIM68Q6AZZ1 485 aa15.99■□□□□ 0.15
EPHB4-206ENST00000487222 ZNF653Q96CK0 615 aa15.99■□□□□ 0.15
EPHB4-206ENST00000487222 LRRIQ4A6NIV6 560 aa15.99■□□□□ 0.15
EPHB4-206ENST00000487222 EIF3CLB5ME19 914 aaKnown RBP15.99■□□□□ 0.15
EPHB4-206ENST00000487222 MFAP3LO75121 409 aa15.99■□□□□ 0.15
EPHB4-206ENST00000487222 MOCS3O95396 460 aa15.99■□□□□ 0.15
EPHB4-206ENST00000487222 SERPING1P05155 500 aa15.99■□□□□ 0.15
EPHB4-206ENST00000487222 POLGP54098 1239 aaPredicted RBP15.99■□□□□ 0.15
EPHB4-206ENST00000487222 DCAF15Q66K64 600 aa15.99■□□□□ 0.15
EPHB4-206ENST00000487222 WHAMMQ8TF30 809 aa15.99■□□□□ 0.15
EPHB4-206ENST00000487222 FAM81BQ96LP2 452 aa15.99■□□□□ 0.15
EPHB4-206ENST00000487222 EIF3CQ99613 913 aaKnown RBP15.99■□□□□ 0.15
EPHB4-206ENST00000487222 EFCC1Q9HA90 598 aa15.99■□□□□ 0.15
EPHB4-206ENST00000487222 TRPC5Q9UL62 973 aaPredicted RBP15.99■□□□□ 0.15
EPHB4-206ENST00000487222 CCPG1Q9ULG6 757 aa15.99■□□□□ 0.15
EPHB4-206ENST00000487222 LUC7L3O95232 432 aaKnown RBP15.98■□□□□ 0.15
EPHB4-206ENST00000487222 ANKRD35Q8N283 1001 aa15.98■□□□□ 0.15
EPHB4-206ENST00000487222 CDKL2Q92772 493 aa15.98■□□□□ 0.15
EPHB4-206ENST00000487222 MMS19Q96T76 1030 aa15.98■□□□□ 0.15
EPHB4-206ENST00000487222 NRBP2Q9NSY0 501 aa15.98■□□□□ 0.15
EPHB4-206ENST00000487222 ZCCHC11Q5TAX3 1644 aaKnown RBP15.98■□□□□ 0.15
EPHB4-206ENST00000487222 VGLL3A8MV65 326 aa15.98■□□□□ 0.15
EPHB4-206ENST00000487222 POC1B-GALNT4F8VUJ3 575 aa15.98■□□□□ 0.15
EPHB4-206ENST00000487222 BAG2O95816 211 aa15.98■□□□□ 0.15
EPHB4-206ENST00000487222 PIK3CAP42336 1068 aa15.98■□□□□ 0.15
EPHB4-206ENST00000487222 RNASELQ05823 741 aaKnown RBP15.98■□□□□ 0.15
EPHB4-206ENST00000487222 DHX9Q08211 1270 aaKnown RBP15.98■□□□□ 0.15
EPHB4-206ENST00000487222 FAM133AQ8N9E0 248 aa15.98■□□□□ 0.15
EPHB4-206ENST00000487222 PIGSQ96S52 555 aa15.98■□□□□ 0.15
EPHB4-206ENST00000487222 NDST4Q9H3R1 872 aa15.98■□□□□ 0.15
EPHB4-206ENST00000487222 CNOT10Q9H9A5 744 aaKnown RBP15.98■□□□□ 0.15
EPHB4-206ENST00000487222 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.98■□□□□ 0.15
EPHB4-206ENST00000487222 CAPN9O14815 690 aa15.98■□□□□ 0.15
EPHB4-206ENST00000487222 FTCDO95954 541 aa15.98■□□□□ 0.15
EPHB4-206ENST00000487222 CXCR5P32302 372 aa15.98■□□□□ 0.15
EPHB4-206ENST00000487222 YWHAGP61981 247 aaKnown RBP eCLIP15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms