RNA–Protein interactions for RNA: ENST00000487091.1

CLIP2-206, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best)

Gene CLIP2, Length 989 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-206ENST00000487091 HOXA13P31271 388 aaPredicted RBP22.09■■□□□ 1.13
CLIP2-206ENST00000487091 PTPN11Q06124 597 aaPredicted RBP22.09■■□□□ 1.13
CLIP2-206ENST00000487091 PSRC1Q6PGN9 363 aaPredicted RBP22.09■■□□□ 1.13
CLIP2-206ENST00000487091 KCNV1Q6PIU1 500 aa22.09■■□□□ 1.13
CLIP2-206ENST00000487091 EMID1Q96A84 441 aaPredicted RBP22.09■■□□□ 1.13
CLIP2-206ENST00000487091 MYL10Q9BUA6 226 aa22.09■■□□□ 1.13
CLIP2-206ENST00000487091 IL23AQ9NPF7 189 aa22.09■■□□□ 1.13
CLIP2-206ENST00000487091 MMP3P08254 477 aa22.08■■□□□ 1.13
CLIP2-206ENST00000487091 COL9A3Q14050 684 aaPredicted RBP22.08■■□□□ 1.13
CLIP2-206ENST00000487091 PGM5Q15124 567 aa22.08■■□□□ 1.13
CLIP2-206ENST00000487091 RASIP1Q5U651 963 aa22.08■■□□□ 1.13
CLIP2-206ENST00000487091 RRP36Q96EU6 259 aaKnown RBP22.08■■□□□ 1.13
CLIP2-206ENST00000487091 TRMT13Q9NUP7 481 aaKnown RBP22.08■■□□□ 1.13
CLIP2-206ENST00000487091 MRVI1Q9Y6F6 885 aa22.08■■□□□ 1.13
CLIP2-206ENST00000487091 UMODL1Q5DID0 1318 aa22.07■■□□□ 1.12
CLIP2-206ENST00000487091 CDC45O75419 566 aa22.07■■□□□ 1.12
CLIP2-206ENST00000487091 MYCLP12524 364 aaPredicted RBP22.07■■□□□ 1.12
CLIP2-206ENST00000487091 CASTP20810 708 aaKnown RBP22.07■■□□□ 1.12
CLIP2-206ENST00000487091 LAMC2Q13753 1193 aa22.07■■□□□ 1.12
CLIP2-206ENST00000487091 ZNF365Q70YC5 407 aa22.07■■□□□ 1.12
CLIP2-206ENST00000487091 FCHSD1Q86WN1 690 aa22.07■■□□□ 1.12
CLIP2-206ENST00000487091 SEMA6BQ9H3T3 888 aa22.07■■□□□ 1.12
CLIP2-206ENST00000487091 MYH7BA7E2Y1 1941 aa22.06■■□□□ 1.12
CLIP2-206ENST00000487091 TMEM265A0A087WTH1 108 aa22.06■■□□□ 1.12
CLIP2-206ENST00000487091 RGS20O76081 388 aa22.06■■□□□ 1.12
CLIP2-206ENST00000487091 ACRP10323 421 aa22.06■■□□□ 1.12
CLIP2-206ENST00000487091 TGFB3P10600 412 aa22.06■■□□□ 1.12
CLIP2-206ENST00000487091 CCND2P30279 289 aa22.06■■□□□ 1.12
CLIP2-206ENST00000487091 CCL23P55773 120 aa22.06■■□□□ 1.12
CLIP2-206ENST00000487091 DGKDQ16760 1214 aa22.06■■□□□ 1.12
CLIP2-206ENST00000487091 TSGA10IPQ3SY00 556 aa22.06■■□□□ 1.12
CLIP2-206ENST00000487091 FAM47CQ5HY64 1035 aa22.06■■□□□ 1.12
CLIP2-206ENST00000487091 SGMS1Q86VZ5 419 aa22.06■■□□□ 1.12
CLIP2-206ENST00000487091 SRBD1Q8N5C6 995 aaKnown RBP22.06■■□□□ 1.12
CLIP2-206ENST00000487091 PIBF1Q8WXW3 757 aa22.06■■□□□ 1.12
CLIP2-206ENST00000487091 CCDC136Q96JN2 1154 aa22.06■■□□□ 1.12
CLIP2-206ENST00000487091 GUCD1Q96NT3 240 aa22.06■■□□□ 1.12
CLIP2-206ENST00000487091 WNT8AQ9H1J5 351 aa22.06■■□□□ 1.12
CLIP2-206ENST00000487091 SEC63Q9UGP8 760 aaKnown RBP22.06■■□□□ 1.12
CLIP2-206ENST00000487091 SLC12A7Q9Y666 1083 aa22.06■■□□□ 1.12
CLIP2-206ENST00000487091 FGBP02675 491 aa22.05■■□□□ 1.12
CLIP2-206ENST00000487091 SESTD1Q86VW0 696 aa22.05■■□□□ 1.12
CLIP2-206ENST00000487091 DHX37Q8IY37 1157 aaKnown RBP22.05■■□□□ 1.12
CLIP2-206ENST00000487091 RPUSD2Q8IZ73 545 aaKnown RBP22.05■■□□□ 1.12
CLIP2-206ENST00000487091 IL31RAQ8NI17 732 aa22.05■■□□□ 1.12
CLIP2-206ENST00000487091 PPTC7Q8NI37 304 aa22.05■■□□□ 1.12
CLIP2-206ENST00000487091 HERVK_113Q902F9 699 aa22.05■■□□□ 1.12
CLIP2-206ENST00000487091 FAM161BQ96MY7 647 aa22.05■■□□□ 1.12
CLIP2-206ENST00000487091 NEK1Q96PY6 1258 aa22.05■■□□□ 1.12
CLIP2-206ENST00000487091 FRMPD4Q14CM0 1322 aa22.05■■□□□ 1.12
CLIP2-206ENST00000487091 PLEKHA8P1O95397 391 aa22.04■■□□□ 1.12
CLIP2-206ENST00000487091 CYP2C9P11712 490 aa22.04■■□□□ 1.12
CLIP2-206ENST00000487091 FANCBQ8NB91 859 aa22.04■■□□□ 1.12
CLIP2-206ENST00000487091 KAT2BQ92831 832 aa22.04■■□□□ 1.12
CLIP2-206ENST00000487091 LRRC2Q9BYS8 371 aa22.04■■□□□ 1.12
CLIP2-206ENST00000487091 MTIF3Q9H2K0 278 aaKnown RBP22.04■■□□□ 1.12
CLIP2-206ENST00000487091 PIK3CDO00329 1044 aa22.03■■□□□ 1.12
CLIP2-206ENST00000487091 STAM2O75886 525 aa22.03■■□□□ 1.12
CLIP2-206ENST00000487091 CELF3Q5SZQ8 465 aaKnown RBP22.03■■□□□ 1.12
CLIP2-206ENST00000487091 MYSM1Q5VVJ2 828 aa22.03■■□□□ 1.12
CLIP2-206ENST00000487091 CUL5Q93034 780 aa22.03■■□□□ 1.12
CLIP2-206ENST00000487091 TTYH1Q9H313 450 aaPredicted RBP22.03■■□□□ 1.12
CLIP2-206ENST00000487091 PITPNM1O00562 1244 aa22.02■■□□□ 1.12
CLIP2-206ENST00000487091 PFKMP08237 780 aa22.02■■□□□ 1.12
CLIP2-206ENST00000487091 HOXD8P13378 290 aaPredicted RBP22.02■■□□□ 1.12
CLIP2-206ENST00000487091 RXRAP19793 462 aa22.02■■□□□ 1.12
CLIP2-206ENST00000487091 EXOSC10Q01780 885 aaKnown RBP22.02■■□□□ 1.12
CLIP2-206ENST00000487091 KRT32Q14532 448 aa22.02■■□□□ 1.12
CLIP2-206ENST00000487091 SYNE3Q6ZMZ3 975 aa22.02■■□□□ 1.12
CLIP2-206ENST00000487091 DHX32Q7L7V1 743 aaKnown RBP22.02■■□□□ 1.12
CLIP2-206ENST00000487091 KATNAL1Q9BW62 490 aa22.02■■□□□ 1.12
CLIP2-206ENST00000487091 MEIS2O14770 477 aa22.01■■□□□ 1.11
CLIP2-206ENST00000487091 PPFIA4O75335 1185 aa22.01■■□□□ 1.11
CLIP2-206ENST00000487091 DNAJB2P25686 324 aa22.01■■□□□ 1.11
CLIP2-206ENST00000487091 MRPS9P82933 396 aaKnown RBP22.01■■□□□ 1.11
CLIP2-206ENST00000487091 BFSP2Q13515 415 aa22.01■■□□□ 1.11
CLIP2-206ENST00000487091 GNPTABQ3T906 1256 aa22.01■■□□□ 1.11
CLIP2-206ENST00000487091 TMTC3Q6ZXV5 915 aa22.01■■□□□ 1.11
CLIP2-206ENST00000487091 RASEFQ8IZ41 740 aa22.01■■□□□ 1.11
CLIP2-206ENST00000487091 CMTR1Q8N1G2 835 aaKnown RBP22.01■■□□□ 1.11
CLIP2-206ENST00000487091 SLC17A8Q8NDX2 589 aa22.01■■□□□ 1.11
CLIP2-206ENST00000487091 SMARCC2Q8TAQ2 1214 aa22.01■■□□□ 1.11
CLIP2-206ENST00000487091 PPP1R13LQ8WUF5 828 aa22.01■■□□□ 1.11
CLIP2-206ENST00000487091 SCLYQ96I15 445 aa22.01■■□□□ 1.11
CLIP2-206ENST00000487091 CDX2Q99626 313 aaPredicted RBP22.01■■□□□ 1.11
CLIP2-206ENST00000487091 NOD1Q9Y239 953 aa22.01■■□□□ 1.11
CLIP2-206ENST00000487091 GGPS1O95749 300 aa22■■□□□ 1.11
CLIP2-206ENST00000487091 F2P00734 622 aa22■■□□□ 1.11
CLIP2-206ENST00000487091 UBA1P22314 1058 aaKnown RBP22■■□□□ 1.11
CLIP2-206ENST00000487091 ICAM3P32942 547 aa22■■□□□ 1.11
CLIP2-206ENST00000487091 CHMP4BP1P59074 171 aa22■■□□□ 1.11
CLIP2-206ENST00000487091 SP2Q02086 613 aa22■■□□□ 1.11
CLIP2-206ENST00000487091 PTGISQ16647 500 aa22■■□□□ 1.11
CLIP2-206ENST00000487091 XRRA1Q6P2D8 792 aa22■■□□□ 1.11
CLIP2-206ENST00000487091 RETREG2Q8NC44 543 aa22■■□□□ 1.11
CLIP2-206ENST00000487091 VWCEQ96DN2 955 aa22■■□□□ 1.11
CLIP2-206ENST00000487091 INPP4AQ96PE3 977 aaPredicted RBP22■■□□□ 1.11
CLIP2-206ENST00000487091 HAS3O00219 553 aa21.99■■□□□ 1.11
CLIP2-206ENST00000487091 HMGB1P09429 215 aaKnown RBP21.99■■□□□ 1.11
CLIP2-206ENST00000487091 RFC2P35250 354 aa21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms