RNA–Protein interactions for RNA: ENST00000486960.5

SF1-217, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-217ENST00000486960 RIF1Q5UIP0 2472 aaKnown RBP6.32□□□□□ -1.4
SF1-217ENST00000486960 TRIM64A6NGJ6 449 aa6.32□□□□□ -1.4
SF1-217ENST00000486960 TRIM64BA6NI03 449 aa6.32□□□□□ -1.4
SF1-217ENST00000486960 APAF1O14727 1248 aa6.32□□□□□ -1.4
SF1-217ENST00000486960 SMAD7O15105 426 aaKnown RBP6.32□□□□□ -1.4
SF1-217ENST00000486960 COQ9O75208 318 aa6.32□□□□□ -1.4
SF1-217ENST00000486960 PGRP06401 933 aa6.32□□□□□ -1.4
SF1-217ENST00000486960 GRK2P25098 689 aa6.32□□□□□ -1.4
SF1-217ENST00000486960 MAPK9P45984 424 aa6.32□□□□□ -1.4
SF1-217ENST00000486960 PLA2G4AP47712 749 aa6.32□□□□□ -1.4
SF1-217ENST00000486960 GMPSP49915 693 aaPredicted RBP6.32□□□□□ -1.4
SF1-217ENST00000486960 TCIRG1Q13488 830 aa6.32□□□□□ -1.4
SF1-217ENST00000486960 MTMR1Q13613 665 aa6.32□□□□□ -1.4
SF1-217ENST00000486960 MINDY4Q4G0A6 757 aa6.32□□□□□ -1.4
SF1-217ENST00000486960 PRR5LQ6MZQ0 368 aa6.32□□□□□ -1.4
SF1-217ENST00000486960 INTS5Q6P9B9 1019 aaKnown RBP6.32□□□□□ -1.4
SF1-217ENST00000486960 TRAF7Q6Q0C0 670 aa6.32□□□□□ -1.4
SF1-217ENST00000486960 CCDC129Q6ZRS4 1044 aa6.32□□□□□ -1.4
SF1-217ENST00000486960 RNF180Q86T96 592 aa6.32□□□□□ -1.4
SF1-217ENST00000486960 DZIP3Q86Y13 1208 aaKnown RBP6.32□□□□□ -1.4
SF1-217ENST00000486960 IQCF2Q8IXL9 164 aa6.32□□□□□ -1.4
SF1-217ENST00000486960 AFAP1L2Q8N4X5 818 aa6.32□□□□□ -1.4
SF1-217ENST00000486960 IP6K1Q92551 441 aa6.32□□□□□ -1.4
SF1-217ENST00000486960 SYAP1Q96A49 352 aaPredicted RBP6.32□□□□□ -1.4
SF1-217ENST00000486960 TTC17Q96AE7 1141 aa6.32□□□□□ -1.4
SF1-217ENST00000486960 HVCN1Q96D96 273 aa6.32□□□□□ -1.4
SF1-217ENST00000486960 PURBQ96QR8 312 aaKnown RBP6.32□□□□□ -1.4
SF1-217ENST00000486960 RHOBTB2Q9BYZ6 727 aa6.32□□□□□ -1.4
SF1-217ENST00000486960 SEMA6BQ9H3T3 888 aa6.32□□□□□ -1.4
SF1-217ENST00000486960 EFCC1Q9HA90 598 aa6.32□□□□□ -1.4
SF1-217ENST00000486960 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.32□□□□□ -1.4
SF1-217ENST00000486960 MAPRE3Q9UPY8 281 aa6.32□□□□□ -1.4
SF1-217ENST00000486960 DMTF1Q9Y222 760 aa6.32□□□□□ -1.4
SF1-217ENST00000486960 RRP15Q9Y3B9 282 aaKnown RBP6.32□□□□□ -1.4
SF1-217ENST00000486960 SPEF1Q9Y4P9 236 aa6.32□□□□□ -1.4
SF1-217ENST00000486960 PCDHGA4Q9Y5G9 962 aa6.32□□□□□ -1.4
SF1-217ENST00000486960 ROCK2O75116 1388 aaKnown RBP6.31□□□□□ -1.4
SF1-217ENST00000486960 F5H423 210 aaPredicted RBP6.31□□□□□ -1.4
SF1-217ENST00000486960 C6orf229H3BNL8 230 aa6.31□□□□□ -1.4
SF1-217ENST00000486960 MPHOSPH10O00566 681 aaKnown RBP6.31□□□□□ -1.4
SF1-217ENST00000486960 HTATSF1O43719 755 aaKnown RBP6.31□□□□□ -1.4
SF1-217ENST00000486960 PLOD3O60568 738 aa6.31□□□□□ -1.4
SF1-217ENST00000486960 HOXB1P14653 301 aaPredicted RBP6.31□□□□□ -1.4
SF1-217ENST00000486960 SYN1P17600 705 aa6.31□□□□□ -1.4
SF1-217ENST00000486960 RAD52P43351 418 aa6.31□□□□□ -1.4
SF1-217ENST00000486960 EIF6P56537 245 aaKnown RBP6.31□□□□□ -1.4
SF1-217ENST00000486960 GJA9P57773 515 aa6.31□□□□□ -1.4
SF1-217ENST00000486960 BPIFB3P59826 476 aa6.31□□□□□ -1.4
SF1-217ENST00000486960 PLCB4Q15147 1175 aa6.31□□□□□ -1.4
SF1-217ENST00000486960 PPP2R5EQ16537 467 aa6.31□□□□□ -1.4
SF1-217ENST00000486960 SLC10A5Q5PT55 438 aa6.31□□□□□ -1.4
SF1-217ENST00000486960 AGAP9Q5VTM2 703 aa6.31□□□□□ -1.4
SF1-217ENST00000486960 FAAH2Q6GMR7 532 aa6.31□□□□□ -1.4
SF1-217ENST00000486960 STYK1Q6J9G0 422 aa6.31□□□□□ -1.4
SF1-217ENST00000486960 FAM180BQ6P0A1 224 aa6.31□□□□□ -1.4
SF1-217ENST00000486960 FAM186BQ8IYM0 893 aa6.31□□□□□ -1.4
SF1-217ENST00000486960 ZNF454Q8N9F8 522 aa6.31□□□□□ -1.4
SF1-217ENST00000486960 RDH13Q8NBN7 331 aa6.31□□□□□ -1.4
SF1-217ENST00000486960 MNS1Q8NEH6 495 aa6.31□□□□□ -1.4
SF1-217ENST00000486960 USP33Q8TEY7 942 aa6.31□□□□□ -1.4
SF1-217ENST00000486960 ASB2Q96Q27 587 aa6.31□□□□□ -1.4
SF1-217ENST00000486960 CARD11Q9BXL7 1154 aa6.31□□□□□ -1.4
SF1-217ENST00000486960 SMYD2Q9NRG4 433 aa6.31□□□□□ -1.4
SF1-217ENST00000486960 HELLSQ9NRZ9 838 aa6.31□□□□□ -1.4
SF1-217ENST00000486960 SMC4Q9NTJ3 1288 aa6.31□□□□□ -1.4
SF1-217ENST00000486960 MRGBPQ9NV56 204 aa6.31□□□□□ -1.4
SF1-217ENST00000486960 KBTBD4Q9NVX7 518 aa6.31□□□□□ -1.4
SF1-217ENST00000486960 UTP6Q9NYH9 597 aaKnown RBP6.31□□□□□ -1.4
SF1-217ENST00000486960 TBK1Q9UHD2 729 aa6.31□□□□□ -1.4
SF1-217ENST00000486960 RCAN3Q9UKA8 241 aa6.31□□□□□ -1.4
SF1-217ENST00000486960 PRDM4Q9UKN5 801 aa6.31□□□□□ -1.4
SF1-217ENST00000486960 PPP1R9AQ9ULJ8 1098 aa6.31□□□□□ -1.4
SF1-217ENST00000486960 TPCN1Q9ULQ1 816 aa6.31□□□□□ -1.4
SF1-217ENST00000486960 PHTF1Q9UMS5 762 aa6.31□□□□□ -1.4
SF1-217ENST00000486960 MAPK8IP1Q9UQF2 711 aa6.31□□□□□ -1.4
SF1-217ENST00000486960 FAM50BQ9Y247 325 aa6.31□□□□□ -1.4
SF1-217ENST00000486960 ABHD14A-ACY1A0A1B0GW23 586 aa6.3□□□□□ -1.4
SF1-217ENST00000486960 FAM205CA6NFA0 338 aa6.3□□□□□ -1.4
SF1-217ENST00000486960 POTEMA6NI47 508 aa6.3□□□□□ -1.4
SF1-217ENST00000486960 H0Y3Z8 333 aa6.3□□□□□ -1.4
SF1-217ENST00000486960 FOXN3O00409 490 aaPredicted RBP6.3□□□□□ -1.4
SF1-217ENST00000486960 GIPC1O14908 333 aa6.3□□□□□ -1.4
SF1-217ENST00000486960 MBD4O95243 580 aa6.3□□□□□ -1.4
SF1-217ENST00000486960 IFIT1P09914 478 aaKnown RBP6.3□□□□□ -1.4
SF1-217ENST00000486960 NUDT7P0C024 238 aa6.3□□□□□ -1.4
SF1-217ENST00000486960 HSD3B1P14060 373 aa6.3□□□□□ -1.4
SF1-217ENST00000486960 FOSL2P15408 326 aa6.3□□□□□ -1.4
SF1-217ENST00000486960 KRT20P35900 424 aa6.3□□□□□ -1.4
SF1-217ENST00000486960 TPD52P55327 224 aaPredicted RBP6.3□□□□□ -1.4
SF1-217ENST00000486960 PDCD2Q16342 344 aaPredicted RBP6.3□□□□□ -1.4
SF1-217ENST00000486960 ZNF697Q5TEC3 545 aa6.3□□□□□ -1.4
SF1-217ENST00000486960 MEI1Q5TIA1 1274 aa6.3□□□□□ -1.4
SF1-217ENST00000486960 POTEGQ6S5H5 508 aa6.3□□□□□ -1.4
SF1-217ENST00000486960 C4orf50Q6ZRC1 276 aa6.3□□□□□ -1.4
SF1-217ENST00000486960 MCM10Q7L590 875 aa6.3□□□□□ -1.4
SF1-217ENST00000486960 OTOP3Q7RTS5 596 aa6.3□□□□□ -1.4
SF1-217ENST00000486960 CATSPER4Q7RTX7 472 aa6.3□□□□□ -1.4
SF1-217ENST00000486960 NME9Q86XW9 330 aa6.3□□□□□ -1.4
SF1-217ENST00000486960 MYLK4Q86YV6 388 aaPredicted RBP6.3□□□□□ -1.4
SF1-217ENST00000486960 TAB3Q8N5C8 712 aaPredicted RBP6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms