RNA–Protein interactions for RNA: ENST00000486868.1

PRKCB-207, Transcript of protein kinase C beta, humanhuman

TSL 3

Gene PRKCB, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-207ENST00000486868 BLOC1S4Q9NUP1 217 aa13.06□□□□□ -0.32
PRKCB-207ENST00000486868 HOXC10Q9NYD6 342 aa13.06□□□□□ -0.32
PRKCB-207ENST00000486868 SCAF8Q9UPN6 1271 aaKnown RBP13.06□□□□□ -0.32
PRKCB-207ENST00000486868 CTDP1Q9Y5B0 961 aaPredicted RBP13.06□□□□□ -0.32
PRKCB-207ENST00000486868 GLTPD2A6NH11 291 aa13.05□□□□□ -0.32
PRKCB-207ENST00000486868 FAM86B1E9PN63 330 aa13.05□□□□□ -0.32
PRKCB-207ENST00000486868 MEIS1O00470 390 aa13.05□□□□□ -0.32
PRKCB-207ENST00000486868 VWA5AO00534 786 aa13.05□□□□□ -0.32
PRKCB-207ENST00000486868 FAM86B2P0C5J1 330 aa13.05□□□□□ -0.32
PRKCB-207ENST00000486868 NF2P35240 595 aa13.05□□□□□ -0.32
PRKCB-207ENST00000486868 ZNF76P36508 570 aa13.05□□□□□ -0.32
PRKCB-207ENST00000486868 SPIRE1Q08AE8 756 aa13.05□□□□□ -0.32
PRKCB-207ENST00000486868 PSMD2Q13200 908 aa13.05□□□□□ -0.32
PRKCB-207ENST00000486868 CEP55Q53EZ4 464 aa13.05□□□□□ -0.32
PRKCB-207ENST00000486868 PRR16Q569H4 304 aa13.05□□□□□ -0.32
PRKCB-207ENST00000486868 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.05□□□□□ -0.32
PRKCB-207ENST00000486868 REPS2Q8NFH8 660 aa13.05□□□□□ -0.32
PRKCB-207ENST00000486868 LARP4BQ92615 738 aaKnown RBP13.05□□□□□ -0.32
PRKCB-207ENST00000486868 POLR3CQ9BUI4 534 aaPredicted RBP13.05□□□□□ -0.32
PRKCB-207ENST00000486868 TANGO6Q9C0B7 1094 aa13.05□□□□□ -0.32
PRKCB-207ENST00000486868 RWDD2AQ9UIY3 292 aa13.05□□□□□ -0.32
PRKCB-207ENST00000486868 CSADQ9Y600 493 aa13.05□□□□□ -0.32
PRKCB-207ENST00000486868 SNCAIPQ9Y6H5 919 aa13.05□□□□□ -0.32
PRKCB-207ENST00000486868 DOCK1Q14185 1865 aa13.05□□□□□ -0.32
PRKCB-207ENST00000486868 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.04□□□□□ -0.32
PRKCB-207ENST00000486868 CXCL11O14625 94 aa13.04□□□□□ -0.32
PRKCB-207ENST00000486868 MSH4O15457 936 aa13.04□□□□□ -0.32
PRKCB-207ENST00000486868 RPA1P27694 616 aa13.04□□□□□ -0.32
PRKCB-207ENST00000486868 HOXA13P31271 388 aaPredicted RBP13.04□□□□□ -0.32
PRKCB-207ENST00000486868 EPHX2P34913 555 aa13.04□□□□□ -0.32
PRKCB-207ENST00000486868 GSDMDP57764 484 aa13.04□□□□□ -0.32
PRKCB-207ENST00000486868 FANCCQ00597 558 aa13.04□□□□□ -0.32
PRKCB-207ENST00000486868 PPATQ06203 517 aa13.04□□□□□ -0.32
PRKCB-207ENST00000486868 PPP2R5CQ13362 524 aa13.04□□□□□ -0.32
PRKCB-207ENST00000486868 STIM1Q13586 685 aa13.04□□□□□ -0.32
PRKCB-207ENST00000486868 ISM2Q6H9L7 571 aa13.04□□□□□ -0.32
PRKCB-207ENST00000486868 UNC13DQ70J99 1090 aa13.04□□□□□ -0.32
PRKCB-207ENST00000486868 GIMAP8Q8ND71 665 aaPredicted RBP13.04□□□□□ -0.32
PRKCB-207ENST00000486868 SLC5A5Q92911 643 aa13.04□□□□□ -0.32
PRKCB-207ENST00000486868 DHTKD1Q96HY7 919 aaPredicted RBP13.04□□□□□ -0.32
PRKCB-207ENST00000486868 AGBL1Q96MI9 1066 aa13.04□□□□□ -0.32
PRKCB-207ENST00000486868 RIT2Q99578 217 aa13.04□□□□□ -0.32
PRKCB-207ENST00000486868 BMP2KQ9NSY1 1161 aaPredicted RBP13.04□□□□□ -0.32
PRKCB-207ENST00000486868 ATAD5Q96QE3 1844 aa13.04□□□□□ -0.32
PRKCB-207ENST00000486868 POTEMA6NI47 508 aa13.03□□□□□ -0.32
PRKCB-207ENST00000486868 LRRC10BA6NIK2 292 aa13.03□□□□□ -0.32
PRKCB-207ENST00000486868 ZNF500O60304 480 aaPredicted RBP13.03□□□□□ -0.32
PRKCB-207ENST00000486868 MSNP26038 577 aaKnown RBP13.03□□□□□ -0.32
PRKCB-207ENST00000486868 CLCN1P35523 988 aa13.03□□□□□ -0.32
PRKCB-207ENST00000486868 CCT6AP40227 531 aaKnown RBP13.03□□□□□ -0.32
PRKCB-207ENST00000486868 FMR1Q06787 632 aaKnown RBP eCLIP13.03□□□□□ -0.325e-6■■■■□ 22.9
PRKCB-207ENST00000486868 SPAG1Q07617 926 aa13.03□□□□□ -0.32
PRKCB-207ENST00000486868 PAK1Q13153 545 aa13.03□□□□□ -0.32
PRKCB-207ENST00000486868 KMT5BQ4FZB7 885 aa13.03□□□□□ -0.32
PRKCB-207ENST00000486868 PRAMEF18Q5VWM3 479 aa13.03□□□□□ -0.32
PRKCB-207ENST00000486868 PCNX4Q63HM2 1172 aa13.03□□□□□ -0.32
PRKCB-207ENST00000486868 PNMA8AQ86V59 439 aaPredicted RBP13.03□□□□□ -0.32
PRKCB-207ENST00000486868 FCHSD1Q86WN1 690 aa13.03□□□□□ -0.32
PRKCB-207ENST00000486868 ANKRD13AQ8IZ07 590 aa13.03□□□□□ -0.32
PRKCB-207ENST00000486868 ADSSL1Q8N142 457 aa13.03□□□□□ -0.32
PRKCB-207ENST00000486868 MB21D1Q8N884 522 aa13.03□□□□□ -0.32
PRKCB-207ENST00000486868 PROCA1Q8NCQ7 364 aaPredicted RBP13.03□□□□□ -0.32
PRKCB-207ENST00000486868 NEK9Q8TD19 979 aa13.03□□□□□ -0.32
PRKCB-207ENST00000486868 SYTL5Q8TDW5 730 aaPredicted RBP13.03□□□□□ -0.32
PRKCB-207ENST00000486868 LRRC15Q8TF66 581 aa13.03□□□□□ -0.32
PRKCB-207ENST00000486868 NOC3LQ8WTT2 800 aaKnown RBP13.03□□□□□ -0.32
PRKCB-207ENST00000486868 TBC1D5Q92609 795 aa13.03□□□□□ -0.32
PRKCB-207ENST00000486868 CTAGE1Q96RT6 745 aa13.03□□□□□ -0.32
PRKCB-207ENST00000486868 MXRA8Q9BRK3 442 aa13.03□□□□□ -0.32
PRKCB-207ENST00000486868 WDR11Q9BZH6 1224 aa13.03□□□□□ -0.32
PRKCB-207ENST00000486868 BLZF1Q9H2G9 400 aa13.03□□□□□ -0.32
PRKCB-207ENST00000486868 TUFT1Q9NNX1 390 aa13.03□□□□□ -0.32
PRKCB-207ENST00000486868 FANCLQ9NW38 375 aa13.03□□□□□ -0.32
PRKCB-207ENST00000486868 VAV3Q9UKW4 847 aa13.03□□□□□ -0.32
PRKCB-207ENST00000486868 NFE2L3Q9Y4A8 694 aa13.03□□□□□ -0.32
PRKCB-207ENST00000486868 MAFGO15525 162 aa13.02□□□□□ -0.33
PRKCB-207ENST00000486868 PSMD10O75832 226 aa13.02□□□□□ -0.33
PRKCB-207ENST00000486868 CD44P16070 742 aaKnown RBP13.02□□□□□ -0.33
PRKCB-207ENST00000486868 HMGCS2P54868 508 aa13.02□□□□□ -0.33
PRKCB-207ENST00000486868 VGLL4Q14135 290 aa13.02□□□□□ -0.33
PRKCB-207ENST00000486868 CDKAL1Q5VV42 579 aa13.02□□□□□ -0.33
PRKCB-207ENST00000486868 B3GNT9Q6UX72 402 aa13.02□□□□□ -0.33
PRKCB-207ENST00000486868 LBX2Q6XYB7 198 aa13.02□□□□□ -0.33
PRKCB-207ENST00000486868 ILDR2Q71H61 639 aa13.02□□□□□ -0.33
PRKCB-207ENST00000486868 OTOP1Q7RTM1 612 aa13.02□□□□□ -0.33
PRKCB-207ENST00000486868 ERO1BQ86YB8 467 aa13.02□□□□□ -0.33
PRKCB-207ENST00000486868 STAMQ92783 540 aa13.02□□□□□ -0.33
PRKCB-207ENST00000486868 ATG4CQ96DT6 458 aa13.02□□□□□ -0.33
PRKCB-207ENST00000486868 MED15Q96RN5 788 aa13.02□□□□□ -0.33
PRKCB-207ENST00000486868 RAVER2Q9HCJ3 691 aaKnown RBP13.02□□□□□ -0.33
PRKCB-207ENST00000486868 EXOC1Q9NV70 894 aa13.02□□□□□ -0.33
PRKCB-207ENST00000486868 UBIAD1Q9Y5Z9 338 aa13.02□□□□□ -0.33
PRKCB-207ENST00000486868 BICDL2A1A5D9 508 aa13.01□□□□□ -0.33
PRKCB-207ENST00000486868 SPDYE5A6NIY4 337 aa13.01□□□□□ -0.33
PRKCB-207ENST00000486868 NFIBO00712 420 aa13.01□□□□□ -0.33
PRKCB-207ENST00000486868 PSMA7O14818 248 aa13.01□□□□□ -0.33
PRKCB-207ENST00000486868 ALAS1P13196 640 aa13.01□□□□□ -0.33
PRKCB-207ENST00000486868 CASP1P29466 404 aa13.01□□□□□ -0.33
PRKCB-207ENST00000486868 UBASH3AP57075 661 aa13.01□□□□□ -0.33
PRKCB-207ENST00000486868 ASIC1P78348 528 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms