RNA–Protein interactions for RNA: ENST00000486533.1

COL12A1-208, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL12A1, Length 1,554 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-208ENST00000486533 RTEL1Q9NZ71 1219 aa10.26□□□□□ -0.77
COL12A1-208ENST00000486533 NAP1L2Q9ULW6 460 aaPredicted RBP10.26□□□□□ -0.77
COL12A1-208ENST00000486533 SYNPO2Q9UMS6 1093 aa10.26□□□□□ -0.77
COL12A1-208ENST00000486533 STX8Q9UNK0 236 aa10.26□□□□□ -0.77
COL12A1-208ENST00000486533 LAMA2P24043 3122 aaKnown RBP10.26□□□□□ -0.77
COL12A1-208ENST00000486533 IGHA2P01877 340 aa10.26□□□□□ -0.77
COL12A1-208ENST00000486533 SYN1P17600 705 aa10.26□□□□□ -0.77
COL12A1-208ENST00000486533 PBX2P40425 430 aa10.26□□□□□ -0.77
COL12A1-208ENST00000486533 APOBRQ0VD83 1088 aa10.26□□□□□ -0.77
COL12A1-208ENST00000486533 IKQ13123 557 aaPredicted RBP10.26□□□□□ -0.77
COL12A1-208ENST00000486533 PRAMEF19Q5SWL8 479 aa10.26□□□□□ -0.77
COL12A1-208ENST00000486533 SLFN13Q68D06 897 aa10.26□□□□□ -0.77
COL12A1-208ENST00000486533 ADALQ6DHV7 355 aa10.26□□□□□ -0.77
COL12A1-208ENST00000486533 CCDC186Q7Z3E2 898 aa10.26□□□□□ -0.77
COL12A1-208ENST00000486533 FSIP1Q8NA03 581 aa10.26□□□□□ -0.77
COL12A1-208ENST00000486533 CCDC150Q8NCX0 1101 aa10.26□□□□□ -0.77
COL12A1-208ENST00000486533 GMCL1P1Q8NEA9 526 aa10.26□□□□□ -0.77
COL12A1-208ENST00000486533 DDX11Q96FC9 970 aa10.26□□□□□ -0.77
COL12A1-208ENST00000486533 PGBD1Q96JS3 809 aa10.26□□□□□ -0.77
COL12A1-208ENST00000486533 ZNF830Q96NB3 372 aaPredicted RBP10.26□□□□□ -0.77
COL12A1-208ENST00000486533 SENP6Q9GZR1 1112 aaPredicted RBP10.26□□□□□ -0.77
COL12A1-208ENST00000486533 DNAJC25Q9H1X3 360 aa10.26□□□□□ -0.77
COL12A1-208ENST00000486533 INCENPQ9NQS7 918 aa10.26□□□□□ -0.77
COL12A1-208ENST00000486533 FEM1BQ9UK73 627 aa10.26□□□□□ -0.77
COL12A1-208ENST00000486533 DNM1LO00429 736 aa10.25□□□□□ -0.77
COL12A1-208ENST00000486533 SEPT4O43236 478 aa10.25□□□□□ -0.77
COL12A1-208ENST00000486533 BMP3P12645 472 aa10.25□□□□□ -0.77
COL12A1-208ENST00000486533 PDIA3P30101 505 aaKnown RBP10.25□□□□□ -0.77
COL12A1-208ENST00000486533 LSM11P83369 360 aaKnown RBP eCLIP10.25□□□□□ -0.77
COL12A1-208ENST00000486533 TPD52L1Q16890 204 aaPredicted RBP10.25□□□□□ -0.77
COL12A1-208ENST00000486533 LRRC26Q2I0M4 334 aa10.25□□□□□ -0.77
COL12A1-208ENST00000486533 PPP4R3BQ5MIZ7 849 aa10.25□□□□□ -0.77
COL12A1-208ENST00000486533 PRO3102Q9H379 93 aa10.25□□□□□ -0.77
COL12A1-208ENST00000486533 KCNF1Q9H3M0 494 aa10.25□□□□□ -0.77
COL12A1-208ENST00000486533 RAVER2Q9HCJ3 691 aaKnown RBP10.25□□□□□ -0.77
COL12A1-208ENST00000486533 POLR3EQ9NVU0 708 aa10.25□□□□□ -0.77
COL12A1-208ENST00000486533 HOOK1Q9UJC3 728 aaKnown RBP10.25□□□□□ -0.77
COL12A1-208ENST00000486533 MTMR7Q9Y216 660 aa10.25□□□□□ -0.77
COL12A1-208ENST00000486533 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.25□□□□□ -0.77
COL12A1-208ENST00000486533 RIPK3Q9Y572 518 aa10.25□□□□□ -0.77
COL12A1-208ENST00000486533 TMEM232C9JQI7 657 aa10.24□□□□□ -0.77
COL12A1-208ENST00000486533 KBTBD13C9JR72 458 aa10.24□□□□□ -0.77
COL12A1-208ENST00000486533 ATP2A1O14983 1001 aa10.24□□□□□ -0.77
COL12A1-208ENST00000486533 CBFA2T2O43439 604 aa10.24□□□□□ -0.77
COL12A1-208ENST00000486533 NMT2O60551 498 aa10.24□□□□□ -0.77
COL12A1-208ENST00000486533 FGAP02671 866 aa10.24□□□□□ -0.77
COL12A1-208ENST00000486533 SLC1A4P43007 532 aa10.24□□□□□ -0.77
COL12A1-208ENST00000486533 KCNJ6P48051 423 aa10.24□□□□□ -0.77
COL12A1-208ENST00000486533 STAT2P52630 851 aa10.24□□□□□ -0.77
COL12A1-208ENST00000486533 ZNF792Q3KQV3 632 aa10.24□□□□□ -0.77
COL12A1-208ENST00000486533 RRP12Q5JTH9 1297 aaKnown RBP10.24□□□□□ -0.77
COL12A1-208ENST00000486533 GJC2Q5T442 439 aaPredicted RBP10.24□□□□□ -0.77
COL12A1-208ENST00000486533 FAM173BQ6P4H8 233 aa10.24□□□□□ -0.77
COL12A1-208ENST00000486533 ARRDC4Q8NCT1 418 aa10.24□□□□□ -0.77
COL12A1-208ENST00000486533 CCDC112Q8NEF3 446 aa10.24□□□□□ -0.77
COL12A1-208ENST00000486533 WASF1Q92558 559 aa10.24□□□□□ -0.77
COL12A1-208ENST00000486533 RNF166Q96A37 237 aaPredicted RBP10.24□□□□□ -0.77
COL12A1-208ENST00000486533 SDF4Q9BRK5 362 aa10.24□□□□□ -0.77
COL12A1-208ENST00000486533 TINF2Q9BSI4 451 aa10.24□□□□□ -0.77
COL12A1-208ENST00000486533 SLC38A10Q9HBR0 1119 aa10.24□□□□□ -0.77
COL12A1-208ENST00000486533 KCND1Q9NSA2 647 aa10.24□□□□□ -0.77
COL12A1-208ENST00000486533 HOMER2Q9NSB8 354 aa10.24□□□□□ -0.77
COL12A1-208ENST00000486533 CGNQ9P2M7 1197 aaKnown RBP10.24□□□□□ -0.77
COL12A1-208ENST00000486533 ANAPC4Q9UJX5 808 aa10.24□□□□□ -0.77
COL12A1-208ENST00000486533 PYCARDQ9ULZ3 195 aa10.24□□□□□ -0.77
COL12A1-208ENST00000486533 DIS3Q9Y2L1 958 aaKnown RBP10.24□□□□□ -0.77
COL12A1-208ENST00000486533 SMCHD1A6NHR9 2005 aa10.24□□□□□ -0.77
COL12A1-208ENST00000486533 ZMYM6O95789 1325 aa10.24□□□□□ -0.77
COL12A1-208ENST00000486533 GOLGA8BA8MQT2 603 aa10.23□□□□□ -0.77
COL12A1-208ENST00000486533 ZNF213O14771 459 aa10.23□□□□□ -0.77
COL12A1-208ENST00000486533 CTIFO43310 598 aaKnown RBP10.23□□□□□ -0.77
COL12A1-208ENST00000486533 GTPBP6O43824 516 aaPredicted RBP10.23□□□□□ -0.77
COL12A1-208ENST00000486533 TNNT1P13805 278 aa10.23□□□□□ -0.77
COL12A1-208ENST00000486533 HAND2P61296 217 aa10.23□□□□□ -0.77
COL12A1-208ENST00000486533 TRIM29Q14134 588 aa10.23□□□□□ -0.77
COL12A1-208ENST00000486533 IQCB1Q15051 598 aa10.23□□□□□ -0.77
COL12A1-208ENST00000486533 ALX1Q15699 326 aa10.23□□□□□ -0.77
COL12A1-208ENST00000486533 STOX1Q6ZVD7 989 aa10.23□□□□□ -0.77
COL12A1-208ENST00000486533 ANKRD35Q8N283 1001 aa10.23□□□□□ -0.77
COL12A1-208ENST00000486533 CHURC1Q8WUH1 139 aa10.23□□□□□ -0.77
COL12A1-208ENST00000486533 CCDC34Q96HJ3 373 aa10.23□□□□□ -0.77
COL12A1-208ENST00000486533 GMCL1Q96IK5 515 aa10.23□□□□□ -0.77
COL12A1-208ENST00000486533 TIGD1Q96MW7 591 aa10.23□□□□□ -0.77
COL12A1-208ENST00000486533 IL17RBQ9NRM6 502 aa10.23□□□□□ -0.77
COL12A1-208ENST00000486533 A0A1W2PPC1 479 aa10.22□□□□□ -0.77
COL12A1-208ENST00000486533 SPTLC2O15270 562 aa10.22□□□□□ -0.77
COL12A1-208ENST00000486533 AP5Z1O43299 807 aa10.22□□□□□ -0.77
COL12A1-208ENST00000486533 PRC1O43663 620 aa10.22□□□□□ -0.77
COL12A1-208ENST00000486533 ORC4O43929 436 aa10.22□□□□□ -0.77
COL12A1-208ENST00000486533 RARBP10826 455 aa10.22□□□□□ -0.77
COL12A1-208ENST00000486533 TAL1P17542 331 aaPredicted RBP10.22□□□□□ -0.77
COL12A1-208ENST00000486533 ADD1P35611 737 aaKnown RBP10.22□□□□□ -0.77
COL12A1-208ENST00000486533 MAGEA10P43363 369 aaPredicted RBP10.22□□□□□ -0.77
COL12A1-208ENST00000486533 OAZ1P54368 228 aa10.22□□□□□ -0.77
COL12A1-208ENST00000486533 GNL2Q13823 731 aaKnown RBP10.22□□□□□ -0.77
COL12A1-208ENST00000486533 KCTD1Q719H9 257 aa10.22□□□□□ -0.77
COL12A1-208ENST00000486533 FAM160B2Q86V87 743 aa10.22□□□□□ -0.77
COL12A1-208ENST00000486533 ENGASEQ8NFI3 743 aa10.22□□□□□ -0.77
COL12A1-208ENST00000486533 TMEM87BQ96K49 555 aa10.22□□□□□ -0.77
COL12A1-208ENST00000486533 USP28Q96RU2 1077 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms