RNA–Protein interactions for RNA: ENST00000485842.5

HPS4-214, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-214ENST00000485842 SH3GLB2Q9NR46 395 aa13.57□□□□□ -0.24
HPS4-214ENST00000485842 SYNRGQ9UMZ2 1314 aa13.57□□□□□ -0.24
HPS4-214ENST00000485842 DUSP11O75319 330 aaKnown RBP13.56□□□□□ -0.24
HPS4-214ENST00000485842 EIF3JO75822 258 aaKnown RBP13.56□□□□□ -0.24
HPS4-214ENST00000485842 FDPSP14324 419 aaKnown RBP13.56□□□□□ -0.24
HPS4-214ENST00000485842 XBP1P17861 261 aa13.56□□□□□ -0.24
HPS4-214ENST00000485842 MCM2P49736 904 aa13.56□□□□□ -0.24
HPS4-214ENST00000485842 AP3B2Q13367 1082 aa13.56□□□□□ -0.24
HPS4-214ENST00000485842 TTLL4Q14679 1199 aa13.56□□□□□ -0.24
HPS4-214ENST00000485842 IQSEC1Q6DN90 963 aa13.56□□□□□ -0.24
HPS4-214ENST00000485842 TLK2Q86UE8 772 aa13.56□□□□□ -0.24
HPS4-214ENST00000485842 VSIG10LQ86VR7 867 aa13.56□□□□□ -0.24
HPS4-214ENST00000485842 ARRDC4Q8NCT1 418 aa13.56□□□□□ -0.24
HPS4-214ENST00000485842 IL27Q8NEV9 243 aa13.56□□□□□ -0.24
HPS4-214ENST00000485842 BICD2Q8TD16 824 aa13.56□□□□□ -0.24
HPS4-214ENST00000485842 TMX3Q96JJ7 454 aa13.56□□□□□ -0.24
HPS4-214ENST00000485842 GJB4Q9NTQ9 266 aa13.56□□□□□ -0.24
HPS4-214ENST00000485842 RTEL1Q9NZ71 1219 aa13.56□□□□□ -0.24
HPS4-214ENST00000485842 KCNJ14Q9UNX9 436 aa13.56□□□□□ -0.24
HPS4-214ENST00000485842 RBM47A0AV96 593 aaKnown RBP13.55□□□□□ -0.24
HPS4-214ENST00000485842 KBTBD13C9JR72 458 aa13.55□□□□□ -0.24
HPS4-214ENST00000485842 ARIH2O95376 493 aa13.55□□□□□ -0.24
HPS4-214ENST00000485842 FOSP01100 380 aaPredicted RBP13.55□□□□□ -0.24
HPS4-214ENST00000485842 C6orf222P0C671 652 aaPredicted RBP13.55□□□□□ -0.24
HPS4-214ENST00000485842 TXNP10599 105 aaKnown RBP13.55□□□□□ -0.24
HPS4-214ENST00000485842 CLK2P49760 499 aaKnown RBP13.55□□□□□ -0.24
HPS4-214ENST00000485842 IRX5P78411 483 aaPredicted RBP13.55□□□□□ -0.24
HPS4-214ENST00000485842 MRPS9P82933 396 aaKnown RBP13.55□□□□□ -0.24
HPS4-214ENST00000485842 LRRC41Q15345 812 aa13.55□□□□□ -0.24
HPS4-214ENST00000485842 DUSP28Q4G0W2 176 aa13.55□□□□□ -0.24
HPS4-214ENST00000485842 PCNX4Q63HM2 1172 aa13.55□□□□□ -0.24
HPS4-214ENST00000485842 TEX2Q8IWB9 1127 aa13.55□□□□□ -0.24
HPS4-214ENST00000485842 ANKLE1Q8NAG6 615 aa13.55□□□□□ -0.24
HPS4-214ENST00000485842 COPS5Q92905 334 aa13.55□□□□□ -0.24
HPS4-214ENST00000485842 PAWRQ96IZ0 340 aaKnown RBP13.55□□□□□ -0.24
HPS4-214ENST00000485842 LLPHQ9BRT6 129 aaKnown RBP13.55□□□□□ -0.24
HPS4-214ENST00000485842 AP5M1Q9H0R1 490 aa13.55□□□□□ -0.24
HPS4-214ENST00000485842 SPC25Q9HBM1 224 aa13.55□□□□□ -0.24
HPS4-214ENST00000485842 GNEQ9Y223 722 aaKnown RBP13.55□□□□□ -0.24
HPS4-214ENST00000485842 MRVI1Q9Y6F6 885 aa13.55□□□□□ -0.24
HPS4-214ENST00000485842 MYADML2A6NDP7 307 aa13.54□□□□□ -0.24
HPS4-214ENST00000485842 DYNC1LI2O43237 492 aaPredicted RBP13.54□□□□□ -0.24
HPS4-214ENST00000485842 ADAMTS4O75173 837 aa13.54□□□□□ -0.24
HPS4-214ENST00000485842 RGS20O76081 388 aa13.54□□□□□ -0.24
HPS4-214ENST00000485842 CAPN2P17655 700 aa13.54□□□□□ -0.24
HPS4-214ENST00000485842 MNX1P50219 401 aaPredicted RBP13.54□□□□□ -0.24
HPS4-214ENST00000485842 BEX3Q00994 111 aa13.54□□□□□ -0.24
HPS4-214ENST00000485842 XRRA1Q6P2D8 792 aa13.54□□□□□ -0.24
HPS4-214ENST00000485842 RNF180Q86T96 592 aa13.54□□□□□ -0.24
HPS4-214ENST00000485842 BLIDQ8IZY5 108 aa13.54□□□□□ -0.24
HPS4-214ENST00000485842 OR6J1Q8NGC5 347 aa13.54□□□□□ -0.24
HPS4-214ENST00000485842 PCDHA4Q9UN74 947 aa13.54□□□□□ -0.24
HPS4-214ENST00000485842 MYH7BA7E2Y1 1941 aa13.54□□□□□ -0.24
HPS4-214ENST00000485842 DNM1LO00429 736 aa13.53□□□□□ -0.24
HPS4-214ENST00000485842 NKRFO15226 690 aaKnown RBP eCLIP13.53□□□□□ -0.24
HPS4-214ENST00000485842 SORBS3O60504 671 aa13.53□□□□□ -0.24
HPS4-214ENST00000485842 SREBF1P36956 1147 aa13.53□□□□□ -0.24
HPS4-214ENST00000485842 GJA9P57773 515 aa13.53□□□□□ -0.24
HPS4-214ENST00000485842 HMGN5P82970 282 aaKnown RBP13.53□□□□□ -0.24
HPS4-214ENST00000485842 ARHGAP4P98171 946 aa13.53□□□□□ -0.24
HPS4-214ENST00000485842 TRIM29Q14134 588 aa13.53□□□□□ -0.24
HPS4-214ENST00000485842 LY6KQ17RY6 165 aa13.53□□□□□ -0.24
HPS4-214ENST00000485842 GNPTABQ3T906 1256 aa13.53□□□□□ -0.24
HPS4-214ENST00000485842 MCTP2Q6DN12 878 aa13.53□□□□□ -0.24
HPS4-214ENST00000485842 NECAB2Q7Z6G3 386 aa13.53□□□□□ -0.24
HPS4-214ENST00000485842 FAM177A1Q8N128 213 aaPredicted RBP13.53□□□□□ -0.24
HPS4-214ENST00000485842 FAM184AQ8NB25 1140 aa13.53□□□□□ -0.24
HPS4-214ENST00000485842 DAGLBQ8NCG7 672 aa13.53□□□□□ -0.24
HPS4-214ENST00000485842 INPP4AQ96PE3 977 aaPredicted RBP13.53□□□□□ -0.24
HPS4-214ENST00000485842 PHF20Q9BVI0 1012 aa13.53□□□□□ -0.24
HPS4-214ENST00000485842 UPF3AQ9H1J1 476 aaKnown RBP13.53□□□□□ -0.24
HPS4-214ENST00000485842 C11orf49Q9H6J7 331 aa13.53□□□□□ -0.24
HPS4-214ENST00000485842 DOCK5Q9H7D0 1870 aa13.53□□□□□ -0.24
HPS4-214ENST00000485842 STAM2O75886 525 aa13.52□□□□□ -0.25
HPS4-214ENST00000485842 GH1P01241 217 aa13.52□□□□□ -0.25
HPS4-214ENST00000485842 ZNF76P36508 570 aa13.52□□□□□ -0.25
HPS4-214ENST00000485842 NPY5RQ15761 445 aa13.52□□□□□ -0.25
HPS4-214ENST00000485842 GNASQ5JWF2 1037 aa13.52□□□□□ -0.25
HPS4-214ENST00000485842 GALNT17Q6IS24 598 aa13.52□□□□□ -0.25
HPS4-214ENST00000485842 CCDC62Q6P9F0 684 aa13.52□□□□□ -0.25
HPS4-214ENST00000485842 NLRX1Q86UT6 975 aa13.52□□□□□ -0.25
HPS4-214ENST00000485842 FERMT2Q96AC1 680 aa13.52□□□□□ -0.25
HPS4-214ENST00000485842 BRMS1Q9HCU9 246 aa13.52□□□□□ -0.25
HPS4-214ENST00000485842 PKD2L1Q9P0L9 805 aa13.52□□□□□ -0.25
HPS4-214ENST00000485842 DDX41Q9UJV9 622 aaKnown RBP13.52□□□□□ -0.25
HPS4-214ENST00000485842 CTAGE5O15320 804 aa13.51□□□□□ -0.25
HPS4-214ENST00000485842 FIBPO43427 364 aa13.51□□□□□ -0.25
HPS4-214ENST00000485842 GGPS1O95749 300 aa13.51□□□□□ -0.25
HPS4-214ENST00000485842 ITGB5P18084 799 aa13.51□□□□□ -0.25
HPS4-214ENST00000485842 UBA1P22314 1058 aaKnown RBP13.51□□□□□ -0.25
HPS4-214ENST00000485842 CST5P28325 142 aaPredicted RBP13.51□□□□□ -0.25
HPS4-214ENST00000485842 RGS19P49795 217 aa13.51□□□□□ -0.25
HPS4-214ENST00000485842 GUCY1B3Q02153 619 aa13.51□□□□□ -0.25
HPS4-214ENST00000485842 MLLT1Q03111 559 aaPredicted RBP13.51□□□□□ -0.25
HPS4-214ENST00000485842 SEMA3FQ13275 785 aa13.51□□□□□ -0.25
HPS4-214ENST00000485842 KCNA10Q16322 511 aa13.51□□□□□ -0.25
HPS4-214ENST00000485842 FSCN1Q16658 493 aaKnown RBP13.51□□□□□ -0.25
HPS4-214ENST00000485842 KRT40Q6A162 431 aa13.51□□□□□ -0.25
HPS4-214ENST00000485842 KCNV1Q6PIU1 500 aa13.51□□□□□ -0.25
HPS4-214ENST00000485842 UBE2Q1Q7Z7E8 422 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms