RNA–Protein interactions for RNA: ENST00000485705.5

RPUSD3-217, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 3

Gene RPUSD3, Length 630 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-217ENST00000485705 RTEL1Q9NZ71 1219 aa17.71■□□□□ 0.43
RPUSD3-217ENST00000485705 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.7■□□□□ 0.42
RPUSD3-217ENST00000485705 B4DLN1 442 aa17.7■□□□□ 0.42
RPUSD3-217ENST00000485705 ADCY6O43306 1168 aa17.7■□□□□ 0.42
RPUSD3-217ENST00000485705 EDIL3O43854 480 aa17.7■□□□□ 0.42
RPUSD3-217ENST00000485705 PTGS1P23219 599 aa17.7■□□□□ 0.42
RPUSD3-217ENST00000485705 CCND2P30279 289 aa17.7■□□□□ 0.42
RPUSD3-217ENST00000485705 KRT2P35908 639 aa17.7■□□□□ 0.42
RPUSD3-217ENST00000485705 SREBF1P36956 1147 aa17.7■□□□□ 0.42
RPUSD3-217ENST00000485705 ADCYAP1R1P41586 468 aa17.7■□□□□ 0.42
RPUSD3-217ENST00000485705 NR5A1Q13285 461 aa17.7■□□□□ 0.42
RPUSD3-217ENST00000485705 CCDC144BQ3MJ40 725 aa17.7■□□□□ 0.42
RPUSD3-217ENST00000485705 EARS2Q5JPH6 523 aaKnown RBP17.7■□□□□ 0.42
RPUSD3-217ENST00000485705 PCNX4Q63HM2 1172 aa17.7■□□□□ 0.42
RPUSD3-217ENST00000485705 SEPT14Q6ZU15 432 aa17.7■□□□□ 0.42
RPUSD3-217ENST00000485705 SPRYD3Q8NCJ5 442 aa17.7■□□□□ 0.42
RPUSD3-217ENST00000485705 FBXO18Q8NFZ0 1043 aa17.7■□□□□ 0.42
RPUSD3-217ENST00000485705 LENG1Q96BZ8 264 aaPredicted RBP17.7■□□□□ 0.42
RPUSD3-217ENST00000485705 VTA1Q9NP79 307 aa17.7■□□□□ 0.42
RPUSD3-217ENST00000485705 NRBP1Q9UHY1 535 aa17.7■□□□□ 0.42
RPUSD3-217ENST00000485705 DOCK5Q9H7D0 1870 aa17.69■□□□□ 0.42
RPUSD3-217ENST00000485705 FAM205CA6NFA0 338 aa17.69■□□□□ 0.42
RPUSD3-217ENST00000485705 BTBD18B2RXH4 712 aa17.69■□□□□ 0.42
RPUSD3-217ENST00000485705 RGS20O76081 388 aa17.69■□□□□ 0.42
RPUSD3-217ENST00000485705 DIS3L2Q8IYB7 885 aaKnown RBP17.69■□□□□ 0.42
RPUSD3-217ENST00000485705 CRYGNQ8WXF5 182 aa17.69■□□□□ 0.42
RPUSD3-217ENST00000485705 TNFRSF25Q93038 417 aa17.69■□□□□ 0.42
RPUSD3-217ENST00000485705 PAK6Q9NQU5 681 aaPredicted RBP17.69■□□□□ 0.42
RPUSD3-217ENST00000485705 SEPT4O43236 478 aa17.68■□□□□ 0.42
RPUSD3-217ENST00000485705 EIF3JO75822 258 aaKnown RBP17.68■□□□□ 0.42
RPUSD3-217ENST00000485705 ARIH2O95376 493 aa17.68■□□□□ 0.42
RPUSD3-217ENST00000485705 ARHGAP4P98171 946 aa17.68■□□□□ 0.42
RPUSD3-217ENST00000485705 GJC2Q5T442 439 aaPredicted RBP17.68■□□□□ 0.42
RPUSD3-217ENST00000485705 MCTP2Q6DN12 878 aa17.68■□□□□ 0.42
RPUSD3-217ENST00000485705 DEFB118Q96PH6 123 aa17.68■□□□□ 0.42
RPUSD3-217ENST00000485705 EHMT1Q9H9B1 1298 aa17.68■□□□□ 0.42
RPUSD3-217ENST00000485705 DDX20Q9UHI6 824 aaKnown RBP17.68■□□□□ 0.42
RPUSD3-217ENST00000485705 KIF3AQ9Y496 699 aa17.68■□□□□ 0.42
RPUSD3-217ENST00000485705 RBM47A0AV96 593 aaKnown RBP17.67■□□□□ 0.42
RPUSD3-217ENST00000485705 LARP1BQ659C4 914 aaKnown RBP17.67■□□□□ 0.42
RPUSD3-217ENST00000485705 LHX8Q68G74 356 aa17.67■□□□□ 0.42
RPUSD3-217ENST00000485705 PIK3AP1Q6ZUJ8 805 aa17.67■□□□□ 0.42
RPUSD3-217ENST00000485705 KRT25Q7Z3Z0 450 aa17.67■□□□□ 0.42
RPUSD3-217ENST00000485705 CYP2W1Q8TAV3 490 aa17.67■□□□□ 0.42
RPUSD3-217ENST00000485705 TBCKQ8TEA7 893 aa17.67■□□□□ 0.42
RPUSD3-217ENST00000485705 BRMS1Q9HCU9 246 aa17.67■□□□□ 0.42
RPUSD3-217ENST00000485705 FAM184BQ9ULE4 1060 aa17.67■□□□□ 0.42
RPUSD3-217ENST00000485705 POTEFA5A3E0 1075 aa17.66■□□□□ 0.42
RPUSD3-217ENST00000485705 KIF28PB7ZC32 967 aa17.66■□□□□ 0.42
RPUSD3-217ENST00000485705 HSP90AA1P07900 732 aaKnown RBP17.66■□□□□ 0.42
RPUSD3-217ENST00000485705 AKR1A1P14550 325 aa17.66■□□□□ 0.42
RPUSD3-217ENST00000485705 SMPD1P17405 629 aa17.66■□□□□ 0.42
RPUSD3-217ENST00000485705 ITGB5P18084 799 aa17.66■□□□□ 0.42
RPUSD3-217ENST00000485705 SEMA3FQ13275 785 aa17.66■□□□□ 0.42
RPUSD3-217ENST00000485705 SAFBQ15424 915 aaKnown RBP eCLIP17.66■□□□□ 0.42
RPUSD3-217ENST00000485705 INF2Q27J81 1249 aa17.66■□□□□ 0.42
RPUSD3-217ENST00000485705 XRRA1Q6P2D8 792 aa17.66■□□□□ 0.42
RPUSD3-217ENST00000485705 CCDC62Q6P9F0 684 aa17.66■□□□□ 0.42
RPUSD3-217ENST00000485705 COPS5Q92905 334 aa17.66■□□□□ 0.42
RPUSD3-217ENST00000485705 INPP4AQ96PE3 977 aaPredicted RBP17.66■□□□□ 0.42
RPUSD3-217ENST00000485705 WDR11Q9BZH6 1224 aa17.66■□□□□ 0.42
RPUSD3-217ENST00000485705 UBIAD1Q9Y5Z9 338 aa17.66■□□□□ 0.42
RPUSD3-217ENST00000485705 CCDC194A0A1B0GVG4 234 aa17.65■□□□□ 0.42
RPUSD3-217ENST00000485705 GJB1P08034 283 aa17.65■□□□□ 0.42
RPUSD3-217ENST00000485705 CYP3A4P08684 503 aa17.65■□□□□ 0.42
RPUSD3-217ENST00000485705 IRX5P78411 483 aaPredicted RBP17.65■□□□□ 0.42
RPUSD3-217ENST00000485705 TNFAIP2Q03169 654 aa17.65■□□□□ 0.42
RPUSD3-217ENST00000485705 NONOQ15233 471 aaKnown RBP eCLIP17.65■□□□□ 0.42
RPUSD3-217ENST00000485705 IQSEC1Q6DN90 963 aa17.65■□□□□ 0.42
RPUSD3-217ENST00000485705 SCFD2Q8WU76 684 aa17.65■□□□□ 0.42
RPUSD3-217ENST00000485705 MXRA8Q9BRK3 442 aa17.65■□□□□ 0.42
RPUSD3-217ENST00000485705 TMEM106CQ9BVX2 250 aa17.65■□□□□ 0.42
RPUSD3-217ENST00000485705 GNEQ9Y223 722 aaKnown RBP17.65■□□□□ 0.42
RPUSD3-217ENST00000485705 CCDC85CA6NKD9 419 aa17.64■□□□□ 0.41
RPUSD3-217ENST00000485705 FAM86B1E9PN63 330 aa17.64■□□□□ 0.41
RPUSD3-217ENST00000485705 H3BQV1 296 aa17.64■□□□□ 0.41
RPUSD3-217ENST00000485705 STAM2O75886 525 aa17.64■□□□□ 0.41
RPUSD3-217ENST00000485705 FAM86B2P0C5J1 330 aa17.64■□□□□ 0.41
RPUSD3-217ENST00000485705 TXNP10599 105 aaKnown RBP17.64■□□□□ 0.41
RPUSD3-217ENST00000485705 ZNF76P36508 570 aa17.64■□□□□ 0.41
RPUSD3-217ENST00000485705 SP2Q02086 613 aa17.64■□□□□ 0.41
RPUSD3-217ENST00000485705 BECN1Q14457 450 aa17.64■□□□□ 0.41
RPUSD3-217ENST00000485705 TTLL4Q14679 1199 aa17.64■□□□□ 0.41
RPUSD3-217ENST00000485705 LY6KQ17RY6 165 aa17.64■□□□□ 0.41
RPUSD3-217ENST00000485705 U2AF1L4Q8WU68 220 aaKnown RBP17.64■□□□□ 0.41
RPUSD3-217ENST00000485705 BCAS3Q9H6U6 928 aa17.64■□□□□ 0.41
RPUSD3-217ENST00000485705 JADE2Q9NQC1 790 aa17.64■□□□□ 0.41
RPUSD3-217ENST00000485705 DDX41Q9UJV9 622 aaKnown RBP17.64■□□□□ 0.41
RPUSD3-217ENST00000485705 MRVI1Q9Y6F6 885 aa17.64■□□□□ 0.41
RPUSD3-217ENST00000485705 IGLV3-22A0A075B6J6 115 aa17.63■□□□□ 0.41
RPUSD3-217ENST00000485705 SPATA31C2B4DYI2 1134 aa17.63■□□□□ 0.41
RPUSD3-217ENST00000485705 SORBS3O60504 671 aa17.63■□□□□ 0.41
RPUSD3-217ENST00000485705 DUSP11O75319 330 aaKnown RBP17.63■□□□□ 0.41
RPUSD3-217ENST00000485705 SGPL1O95470 568 aa17.63■□□□□ 0.41
RPUSD3-217ENST00000485705 TDP2O95551 362 aa17.63■□□□□ 0.41
RPUSD3-217ENST00000485705 PGK1P00558 417 aa17.63■□□□□ 0.41
RPUSD3-217ENST00000485705 ARP10275 920 aa17.63■□□□□ 0.41
RPUSD3-217ENST00000485705 RARBP10826 455 aa17.63■□□□□ 0.41
RPUSD3-217ENST00000485705 SYT1P21579 422 aa17.63■□□□□ 0.41
RPUSD3-217ENST00000485705 ICAM3P32942 547 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms