RNA–Protein interactions for RNA: ENST00000485550.5

HMGN1-215, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 745 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-215ENST00000485550 UBA5Q9GZZ9 404 aa12.41□□□□□ -0.42
HMGN1-215ENST00000485550 RNF41Q9H4P4 317 aaPredicted RBP12.41□□□□□ -0.42
HMGN1-215ENST00000485550 SUPT16HQ9Y5B9 1047 aaKnown RBP12.41□□□□□ -0.42
HMGN1-215ENST00000485550 MYO7AQ13402 2215 aa12.41□□□□□ -0.42
HMGN1-215ENST00000485550 TNKSO95271 1327 aa12.4□□□□□ -0.42
HMGN1-215ENST00000485550 ZMYM6O95789 1325 aa12.4□□□□□ -0.42
HMGN1-215ENST00000485550 ZNF318Q5VUA4 2279 aa12.4□□□□□ -0.42
HMGN1-215ENST00000485550 LPXNO60711 386 aa12.4□□□□□ -0.42
HMGN1-215ENST00000485550 KDM4AO75164 1064 aa12.4□□□□□ -0.42
HMGN1-215ENST00000485550 PFKMP08237 780 aa12.4□□□□□ -0.42
HMGN1-215ENST00000485550 ACTN1P12814 892 aa12.4□□□□□ -0.42
HMGN1-215ENST00000485550 CALML3P27482 149 aa12.4□□□□□ -0.42
HMGN1-215ENST00000485550 ZNF543Q08ER8 600 aa12.4□□□□□ -0.42
HMGN1-215ENST00000485550 GDPD5Q8WTR4 605 aa12.4□□□□□ -0.42
HMGN1-215ENST00000485550 SPOCK2Q92563 424 aa12.4□□□□□ -0.42
HMGN1-215ENST00000485550 UIMC1Q96RL1 719 aa12.4□□□□□ -0.42
HMGN1-215ENST00000485550 SEZ6LQ9BYH1 1024 aa12.4□□□□□ -0.42
HMGN1-215ENST00000485550 B4E1Z4 1266 aa12.39□□□□□ -0.43
HMGN1-215ENST00000485550 PCP11498 1178 aaKnown RBP12.39□□□□□ -0.43
HMGN1-215ENST00000485550 MRE11P49959 708 aa12.39□□□□□ -0.43
HMGN1-215ENST00000485550 ALDH5A1P51649 535 aaPredicted RBP12.39□□□□□ -0.43
HMGN1-215ENST00000485550 IRX6P78412 446 aaPredicted RBP12.39□□□□□ -0.43
HMGN1-215ENST00000485550 IQSEC1Q6DN90 963 aa12.39□□□□□ -0.43
HMGN1-215ENST00000485550 SLC30A10Q6XR72 485 aa12.39□□□□□ -0.43
HMGN1-215ENST00000485550 CLEC4DQ8WXI8 215 aa12.39□□□□□ -0.43
HMGN1-215ENST00000485550 ADD3Q9UEY8 706 aaKnown RBP12.39□□□□□ -0.43
HMGN1-215ENST00000485550 MYH7BA7E2Y1 1941 aa12.39□□□□□ -0.43
HMGN1-215ENST00000485550 NLRC5Q86WI3 1866 aa12.38□□□□□ -0.43
HMGN1-215ENST00000485550 KIF28PB7ZC32 967 aa12.38□□□□□ -0.43
HMGN1-215ENST00000485550 SNHG28P0DPA3 235 aa12.38□□□□□ -0.43
HMGN1-215ENST00000485550 RPS6P62753 249 aaKnown RBP12.38□□□□□ -0.43
HMGN1-215ENST00000485550 USH1GQ495M9 461 aa12.38□□□□□ -0.43
HMGN1-215ENST00000485550 FAM47CQ5HY64 1035 aa12.38□□□□□ -0.43
HMGN1-215ENST00000485550 RNF207Q6ZRF8 634 aa12.38□□□□□ -0.43
HMGN1-215ENST00000485550 TMCO2Q7Z6W1 182 aaPredicted RBP12.38□□□□□ -0.43
HMGN1-215ENST00000485550 HERC6Q8IVU3 1022 aa12.38□□□□□ -0.43
HMGN1-215ENST00000485550 PNMA1Q8ND90 353 aa12.38□□□□□ -0.43
HMGN1-215ENST00000485550 FTOQ9C0B1 505 aaKnown RBP eCLIP12.38□□□□□ -0.43
HMGN1-215ENST00000485550 IL25Q9H293 177 aa12.38□□□□□ -0.43
HMGN1-215ENST00000485550 VTA1Q9NP79 307 aa12.38□□□□□ -0.43
HMGN1-215ENST00000485550 MICAL3Q7RTP6 2002 aa12.37□□□□□ -0.43
HMGN1-215ENST00000485550 LCHNA4D1U4 455 aa12.37□□□□□ -0.43
HMGN1-215ENST00000485550 PRR33A8MZF0 331 aa12.37□□□□□ -0.43
HMGN1-215ENST00000485550 HIP1O00291 1037 aa12.37□□□□□ -0.43
HMGN1-215ENST00000485550 MYL3P08590 195 aa12.37□□□□□ -0.43
HMGN1-215ENST00000485550 SUPT20HL2P0C7V6 817 aa12.37□□□□□ -0.43
HMGN1-215ENST00000485550 PDE4AP27815 886 aa12.37□□□□□ -0.43
HMGN1-215ENST00000485550 IMMTQ16891 758 aaKnown RBP12.37□□□□□ -0.43
HMGN1-215ENST00000485550 GPATCH4Q5T3I0 446 aaKnown RBP12.37□□□□□ -0.43
HMGN1-215ENST00000485550 IQCA1Q86XH1 822 aa12.37□□□□□ -0.43
HMGN1-215ENST00000485550 DGKHQ86XP1 1220 aa12.37□□□□□ -0.43
HMGN1-215ENST00000485550 PHOSPHO2Q8TCD6 241 aa12.37□□□□□ -0.43
HMGN1-215ENST00000485550 MORC4Q8TE76 937 aa12.37□□□□□ -0.43
HMGN1-215ENST00000485550 TBC1D5Q92609 795 aa12.37□□□□□ -0.43
HMGN1-215ENST00000485550 ZSCAN10Q96SZ4 725 aaPredicted RBP12.37□□□□□ -0.43
HMGN1-215ENST00000485550 DSCC1Q9BVC3 393 aa12.37□□□□□ -0.43
HMGN1-215ENST00000485550 WDR11Q9BZH6 1224 aa12.37□□□□□ -0.43
HMGN1-215ENST00000485550 KAT14Q9H8E8 782 aa12.37□□□□□ -0.43
HMGN1-215ENST00000485550 VAT1LQ9HCJ6 419 aa12.37□□□□□ -0.43
HMGN1-215ENST00000485550 ZSWIM5Q9P217 1185 aa12.37□□□□□ -0.43
HMGN1-215ENST00000485550 MTUS1Q9ULD2 1270 aa12.37□□□□□ -0.43
HMGN1-215ENST00000485550 ATG2AQ2TAZ0 1938 aa12.37□□□□□ -0.43
HMGN1-215ENST00000485550 RBAK-RBAKDNI3L0D1 243 aa12.36□□□□□ -0.43
HMGN1-215ENST00000485550 DHX16O60231 1041 aaKnown RBP12.36□□□□□ -0.43
HMGN1-215ENST00000485550 IQCF3P0C7M6 154 aa12.36□□□□□ -0.43
HMGN1-215ENST00000485550 IL9P15248 144 aa12.36□□□□□ -0.43
HMGN1-215ENST00000485550 SSTR3P32745 418 aaPredicted RBP12.36□□□□□ -0.43
HMGN1-215ENST00000485550 PURAQ00577 322 aaKnown RBP12.36□□□□□ -0.43
HMGN1-215ENST00000485550 PDE4DQ08499 809 aa12.36□□□□□ -0.43
HMGN1-215ENST00000485550 DUSP28Q4G0W2 176 aa12.36□□□□□ -0.43
HMGN1-215ENST00000485550 ADGRF4Q8IZF3 695 aa12.36□□□□□ -0.43
HMGN1-215ENST00000485550 GJD3Q8N144 294 aa12.36□□□□□ -0.43
HMGN1-215ENST00000485550 UBE2ZQ9H832 354 aaPredicted RBP12.36□□□□□ -0.43
HMGN1-215ENST00000485550 POLR3EQ9NVU0 708 aa12.36□□□□□ -0.43
HMGN1-215ENST00000485550 Q9Y3F1 56 aa12.36□□□□□ -0.43
HMGN1-215ENST00000485550 WDFY4Q6ZS81 3184 aa12.36□□□□□ -0.43
HMGN1-215ENST00000485550 GSPT1P15170 499 aaKnown RBP12.35□□□□□ -0.43
HMGN1-215ENST00000485550 RFC2P35250 354 aa12.35□□□□□ -0.43
HMGN1-215ENST00000485550 GSE1Q14687 1217 aa12.35□□□□□ -0.43
HMGN1-215ENST00000485550 CDC37Q16543 378 aaPredicted RBP12.35□□□□□ -0.43
HMGN1-215ENST00000485550 NBPF20Q3BBV1 942 aa12.35□□□□□ -0.43
HMGN1-215ENST00000485550 CCDC178Q5BJE1 867 aa12.35□□□□□ -0.43
HMGN1-215ENST00000485550 FAM178BQ8IXR5 827 aa12.35□□□□□ -0.43
HMGN1-215ENST00000485550 ENAHQ8N8S7 591 aaPredicted RBP12.35□□□□□ -0.43
HMGN1-215ENST00000485550 RETREG2Q8NC44 543 aa12.35□□□□□ -0.43
HMGN1-215ENST00000485550 OR6J1Q8NGC5 347 aa12.35□□□□□ -0.43
HMGN1-215ENST00000485550 COPS5Q92905 334 aa12.35□□□□□ -0.43
HMGN1-215ENST00000485550 CTNNA3Q9UI47 895 aa12.35□□□□□ -0.43
HMGN1-215ENST00000485550 PCDHB8Q9UN66 801 aa12.35□□□□□ -0.43
HMGN1-215ENST00000485550 WDR19Q8NEZ3 1342 aa12.35□□□□□ -0.43
HMGN1-215ENST00000485550 PARP1P09874 1014 aaKnown RBP12.34□□□□□ -0.43
HMGN1-215ENST00000485550 KCNA5P22460 613 aa12.34□□□□□ -0.43
HMGN1-215ENST00000485550 KCNJ6P48051 423 aa12.34□□□□□ -0.43
HMGN1-215ENST00000485550 CHMP4BP1P59074 171 aa12.34□□□□□ -0.43
HMGN1-215ENST00000485550 NHLH1Q02575 133 aa12.34□□□□□ -0.43
HMGN1-215ENST00000485550 CSPP1Q1MSJ5 1256 aa12.34□□□□□ -0.43
HMGN1-215ENST00000485550 STAG2Q8N3U4 1231 aa12.34□□□□□ -0.43
HMGN1-215ENST00000485550 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.34□□□□□ -0.43
HMGN1-215ENST00000485550 ANKS1AQ92625 1134 aa12.34□□□□□ -0.43
HMGN1-215ENST00000485550 FBXL18Q96ME1 805 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms