RNA–Protein interactions for RNA: ENST00000485102.1

HDAC6-227, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-227ENST00000485102 DGKDQ16760 1214 aa15.22■□□□□ 0.03
HDAC6-227ENST00000485102 LY6KQ17RY6 165 aa15.22■□□□□ 0.03
HDAC6-227ENST00000485102 USH1GQ495M9 461 aa15.22■□□□□ 0.03
HDAC6-227ENST00000485102 GDF6Q6KF10 455 aaPredicted RBP15.22■□□□□ 0.03
HDAC6-227ENST00000485102 ADGRF4Q8IZF3 695 aa15.22■□□□□ 0.03
HDAC6-227ENST00000485102 MICALL1Q8N3F8 863 aa15.22■□□□□ 0.03
HDAC6-227ENST00000485102 RMDN3Q96TC7 470 aa15.22■□□□□ 0.03
HDAC6-227ENST00000485102 OSBPL3Q9H4L5 887 aa15.22■□□□□ 0.03
HDAC6-227ENST00000485102 MAP3K20Q9NYL2 800 aaKnown RBP15.22■□□□□ 0.03
HDAC6-227ENST00000485102 COL20A1Q9P218 1284 aa15.22■□□□□ 0.03
HDAC6-227ENST00000485102 GTF2IRD1Q9UHL9 959 aa15.22■□□□□ 0.03
HDAC6-227ENST00000485102 DDX41Q9UJV9 622 aaKnown RBP15.22■□□□□ 0.03
HDAC6-227ENST00000485102 MRPL11Q9Y3B7 192 aaKnown RBP15.22■□□□□ 0.03
HDAC6-227ENST00000485102 NEDD4P46934 1319 aa15.21■□□□□ 0.03
HDAC6-227ENST00000485102 ABHD14A-ACY1A0A1B0GW23 586 aa15.21■□□□□ 0.03
HDAC6-227ENST00000485102 HAS3O00219 553 aa15.21■□□□□ 0.03
HDAC6-227ENST00000485102 TLL1O43897 1013 aa15.21■□□□□ 0.03
HDAC6-227ENST00000485102 EFCAB14O75071 495 aa15.21■□□□□ 0.03
HDAC6-227ENST00000485102 KCNJ6P48051 423 aa15.21■□□□□ 0.03
HDAC6-227ENST00000485102 KCNQ1P51787 676 aa15.21■□□□□ 0.03
HDAC6-227ENST00000485102 WDR5P61964 334 aaKnown RBP15.21■□□□□ 0.03
HDAC6-227ENST00000485102 GRB10Q13322 594 aa15.21■□□□□ 0.03
HDAC6-227ENST00000485102 LAMC2Q13753 1193 aa15.21■□□□□ 0.03
HDAC6-227ENST00000485102 CNKSR3Q6P9H4 555 aa15.21■□□□□ 0.03
HDAC6-227ENST00000485102 SEPT14Q6ZU15 432 aa15.21■□□□□ 0.03
HDAC6-227ENST00000485102 LRRC8DQ7L1W4 858 aa15.21■□□□□ 0.03
HDAC6-227ENST00000485102 SMC5Q8IY18 1101 aa15.21■□□□□ 0.03
HDAC6-227ENST00000485102 SAMD3Q8N6K7 520 aa15.21■□□□□ 0.03
HDAC6-227ENST00000485102 PPP1R13LQ8WUF5 828 aa15.21■□□□□ 0.03
HDAC6-227ENST00000485102 ARNTL2Q8WYA1 636 aa15.21■□□□□ 0.03
HDAC6-227ENST00000485102 DHX38Q92620 1227 aaKnown RBP15.21■□□□□ 0.03
HDAC6-227ENST00000485102 KATNAL1Q9BW62 490 aa15.21■□□□□ 0.03
HDAC6-227ENST00000485102 CERS4Q9HA82 394 aa15.21■□□□□ 0.03
HDAC6-227ENST00000485102 ARIH1Q9Y4X5 557 aaPredicted RBP15.21■□□□□ 0.03
HDAC6-227ENST00000485102 MYH6P13533 1939 aa15.21■□□□□ 0.02
HDAC6-227ENST00000485102 PTPRSQ13332 1948 aa15.21■□□□□ 0.02
HDAC6-227ENST00000485102 TRIM6-TRIM34B2RNG4 842 aa15.2■□□□□ 0.02
HDAC6-227ENST00000485102 KDM4AO75164 1064 aa15.2■□□□□ 0.02
HDAC6-227ENST00000485102 PPFIA4O75335 1185 aa15.2■□□□□ 0.02
HDAC6-227ENST00000485102 F2P00734 622 aa15.2■□□□□ 0.02
HDAC6-227ENST00000485102 NR3C2P08235 984 aa15.2■□□□□ 0.02
HDAC6-227ENST00000485102 CKBP12277 381 aa15.2■□□□□ 0.02
HDAC6-227ENST00000485102 SKIV2LQ15477 1246 aaKnown RBP15.2■□□□□ 0.02
HDAC6-227ENST00000485102 QRICH1Q2TAL8 776 aa15.2■□□□□ 0.02
HDAC6-227ENST00000485102 PPTC7Q8NI37 304 aa15.2■□□□□ 0.02
HDAC6-227ENST00000485102 HLA-CQ95604 372 aa15.2■□□□□ 0.02
HDAC6-227ENST00000485102 NECAB3Q96P71 396 aaPredicted RBP15.2■□□□□ 0.02
HDAC6-227ENST00000485102 ZSCAN10Q96SZ4 725 aaPredicted RBP15.2■□□□□ 0.02
HDAC6-227ENST00000485102 ZKSCAN3Q9BRR0 538 aa15.2■□□□□ 0.02
HDAC6-227ENST00000485102 CPVLQ9H3G5 476 aa15.2■□□□□ 0.02
HDAC6-227ENST00000485102 KAT14Q9H8E8 782 aa15.2■□□□□ 0.02
HDAC6-227ENST00000485102 JMJD4Q9H9V9 463 aa15.2■□□□□ 0.02
HDAC6-227ENST00000485102 ZSWIM5Q9P217 1185 aa15.2■□□□□ 0.02
HDAC6-227ENST00000485102 NBNO60934 754 aa15.19■□□□□ 0.02
HDAC6-227ENST00000485102 GJB5O95377 273 aa15.19■□□□□ 0.02
HDAC6-227ENST00000485102 HSD17B4P51659 736 aa15.19■□□□□ 0.02
HDAC6-227ENST00000485102 PTK7Q13308 1070 aa15.19■□□□□ 0.02
HDAC6-227ENST00000485102 KRT40Q6A162 431 aa15.19■□□□□ 0.02
HDAC6-227ENST00000485102 KCNV1Q6PIU1 500 aa15.19■□□□□ 0.02
HDAC6-227ENST00000485102 TRAF7Q6Q0C0 670 aa15.19■□□□□ 0.02
HDAC6-227ENST00000485102 FBXO11Q86XK2 927 aa15.19■□□□□ 0.02
HDAC6-227ENST00000485102 ENAHQ8N8S7 591 aaPredicted RBP15.19■□□□□ 0.02
HDAC6-227ENST00000485102 MTMR8Q96EF0 704 aa15.19■□□□□ 0.02
HDAC6-227ENST00000485102 RAD9AQ99638 391 aa15.19■□□□□ 0.02
HDAC6-227ENST00000485102 DSCC1Q9BVC3 393 aa15.19■□□□□ 0.02
HDAC6-227ENST00000485102 PXMP2Q9NR77 195 aa15.19■□□□□ 0.02
HDAC6-227ENST00000485102 HDAC6Q9UBN7 1215 aa15.19■□□□□ 0.02
HDAC6-227ENST00000485102 MYH7BA7E2Y1 1941 aa15.19■□□□□ 0.02
HDAC6-227ENST00000485102 LAMA4Q16363 1823 aa15.18■□□□□ 0.02
HDAC6-227ENST00000485102 OPLAHO14841 1288 aa15.18■□□□□ 0.02
HDAC6-227ENST00000485102 PARP1P09874 1014 aaKnown RBP15.18■□□□□ 0.02
HDAC6-227ENST00000485102 TGFB3P10600 412 aa15.18■□□□□ 0.02
HDAC6-227ENST00000485102 PLA2G5P39877 138 aa15.18■□□□□ 0.02
HDAC6-227ENST00000485102 PSEN2P49810 448 aa15.18■□□□□ 0.02
HDAC6-227ENST00000485102 ERVK-21P61565 698 aa15.18■□□□□ 0.02
HDAC6-227ENST00000485102 TRIM71Q2Q1W2 868 aaKnown RBP15.18■□□□□ 0.02
HDAC6-227ENST00000485102 ARHGEF16Q5VV41 709 aa15.18■□□□□ 0.02
HDAC6-227ENST00000485102 STOX1Q6ZVD7 989 aa15.18■□□□□ 0.02
HDAC6-227ENST00000485102 C7orf31Q8N865 590 aa15.18■□□□□ 0.02
HDAC6-227ENST00000485102 RILPL2Q969X0 211 aa15.18■□□□□ 0.02
HDAC6-227ENST00000485102 CRBNQ96SW2 442 aa15.18■□□□□ 0.02
HDAC6-227ENST00000485102 AMNQ9BXJ7 453 aa15.18■□□□□ 0.02
HDAC6-227ENST00000485102 LNPKQ9C0E8 428 aa15.18■□□□□ 0.02
HDAC6-227ENST00000485102 LCHNA4D1U4 455 aa15.17■□□□□ 0.02
HDAC6-227ENST00000485102 HIP1O00291 1037 aa15.17■□□□□ 0.02
HDAC6-227ENST00000485102 RGS20O76081 388 aa15.17■□□□□ 0.02
HDAC6-227ENST00000485102 DEFB103AP81534 67 aa15.17■□□□□ 0.02
HDAC6-227ENST00000485102 IKBKEQ14164 716 aa15.17■□□□□ 0.02
HDAC6-227ENST00000485102 MFSD10Q14728 455 aa15.17■□□□□ 0.02
HDAC6-227ENST00000485102 KIAA0753Q2KHM9 967 aa15.17■□□□□ 0.02
HDAC6-227ENST00000485102 MYSM1Q5VVJ2 828 aa15.17■□□□□ 0.02
HDAC6-227ENST00000485102 CHST3Q7LGC8 479 aa15.17■□□□□ 0.02
HDAC6-227ENST00000485102 VSIG10LQ86VR7 867 aa15.17■□□□□ 0.02
HDAC6-227ENST00000485102 PLEKHM2Q8IWE5 1019 aa15.17■□□□□ 0.02
HDAC6-227ENST00000485102 PDCD2LQ9BRP1 358 aa15.17■□□□□ 0.02
HDAC6-227ENST00000485102 ZBED2Q9BTP6 218 aa15.17■□□□□ 0.02
HDAC6-227ENST00000485102 KRT23Q9C075 422 aa15.17■□□□□ 0.02
HDAC6-227ENST00000485102 CTNNA3Q9UI47 895 aa15.17■□□□□ 0.02
HDAC6-227ENST00000485102 MRVI1Q9Y6F6 885 aa15.17■□□□□ 0.02
HDAC6-227ENST00000485102 B4E1Z4 1266 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms