RNA–Protein interactions for RNA: ENST00000484275.1

SCAF11-207, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-207ENST00000484275 Q8N1Y9 231 aa7.39□□□□□ -1.23
SCAF11-207ENST00000484275 KREMEN2Q8NCW0 462 aa7.39□□□□□ -1.23
SCAF11-207ENST00000484275 MICAL1Q8TDZ2 1067 aa7.39□□□□□ -1.23
SCAF11-207ENST00000484275 ADAMTS17Q8TE56 1095 aa7.39□□□□□ -1.23
SCAF11-207ENST00000484275 PALD1Q9ULE6 856 aa7.39□□□□□ -1.23
SCAF11-207ENST00000484275 THBS2P35442 1172 aa7.38□□□□□ -1.23
SCAF11-207ENST00000484275 GJA9P57773 515 aa7.38□□□□□ -1.23
SCAF11-207ENST00000484275 PRSS53Q2L4Q9 553 aa7.38□□□□□ -1.23
SCAF11-207ENST00000484275 MRM1Q6IN84 353 aaKnown RBP7.38□□□□□ -1.23
SCAF11-207ENST00000484275 HHIPL2Q6UWX4 724 aa7.38□□□□□ -1.23
SCAF11-207ENST00000484275 SEC14L1Q92503 715 aa7.38□□□□□ -1.23
SCAF11-207ENST00000484275 AP5M1Q9H0R1 490 aa7.38□□□□□ -1.23
SCAF11-207ENST00000484275 BCL6P41182 706 aa7.37□□□□□ -1.23
SCAF11-207ENST00000484275 ECI1P42126 302 aa7.37□□□□□ -1.23
SCAF11-207ENST00000484275 SLC6A11P48066 632 aa7.37□□□□□ -1.23
SCAF11-207ENST00000484275 LARP1BQ659C4 914 aaKnown RBP7.37□□□□□ -1.23
SCAF11-207ENST00000484275 DENND5AQ6IQ26 1287 aa7.37□□□□□ -1.23
SCAF11-207ENST00000484275 CD300LDQ6UXZ3 194 aa7.37□□□□□ -1.23
SCAF11-207ENST00000484275 TTLL7Q6ZT98 887 aa7.37□□□□□ -1.23
SCAF11-207ENST00000484275 CEP68Q76N32 757 aa7.37□□□□□ -1.23
SCAF11-207ENST00000484275 RIOX2Q8IUF8 465 aa7.37□□□□□ -1.23
SCAF11-207ENST00000484275 ACTR10Q9NZ32 417 aa7.37□□□□□ -1.23
SCAF11-207ENST00000484275 TIMM13Q9Y5L4 95 aaPredicted RBP7.37□□□□□ -1.23
SCAF11-207ENST00000484275 X6R8D5 127 aa7.37□□□□□ -1.23
SCAF11-207ENST00000484275 K7ESM1 405 aa7.36□□□□□ -1.23
SCAF11-207ENST00000484275 SMARCA5O60264 1052 aaPredicted RBP7.36□□□□□ -1.23
SCAF11-207ENST00000484275 SUSD5O60279 629 aa7.36□□□□□ -1.23
SCAF11-207ENST00000484275 SCG5P05408 212 aa7.36□□□□□ -1.23
SCAF11-207ENST00000484275 SNRPB2P08579 225 aaKnown RBP7.36□□□□□ -1.23
SCAF11-207ENST00000484275 LCP1P13796 627 aa7.36□□□□□ -1.23
SCAF11-207ENST00000484275 RPL13P26373 211 aaKnown RBP7.36□□□□□ -1.23
SCAF11-207ENST00000484275 HOXC12P31275 282 aa7.36□□□□□ -1.23
SCAF11-207ENST00000484275 ETFBP38117 255 aa7.36□□□□□ -1.23
SCAF11-207ENST00000484275 STAT5AP42229 794 aa7.36□□□□□ -1.23
SCAF11-207ENST00000484275 ITGA1P56199 1179 aa7.36□□□□□ -1.23
SCAF11-207ENST00000484275 RPL11P62913 178 aaKnown RBP7.36□□□□□ -1.23
SCAF11-207ENST00000484275 SV2CQ496J9 727 aa7.36□□□□□ -1.23
SCAF11-207ENST00000484275 PRR31Q5SQ13 230 aa7.36□□□□□ -1.23
SCAF11-207ENST00000484275 E4F1Q66K89 784 aaPredicted RBP7.36□□□□□ -1.23
SCAF11-207ENST00000484275 IQCEQ6IPM2 695 aa7.36□□□□□ -1.23
SCAF11-207ENST00000484275 MILR1Q7Z6M3 343 aa7.36□□□□□ -1.23
SCAF11-207ENST00000484275 KYQ8NBH2 561 aa7.36□□□□□ -1.23
SCAF11-207ENST00000484275 RCBTB1Q8NDN9 531 aa7.36□□□□□ -1.23
SCAF11-207ENST00000484275 DIO2Q92813 273 aa7.36□□□□□ -1.23
SCAF11-207ENST00000484275 RBM15Q96T37 977 aaKnown RBP eCLIP7.36□□□□□ -1.23
SCAF11-207ENST00000484275 CAPNS1P04632 268 aa7.35□□□□□ -1.23
SCAF11-207ENST00000484275 CR1LQ2VPA4 569 aa7.35□□□□□ -1.23
SCAF11-207ENST00000484275 RGL3Q3MIN7 710 aa7.35□□□□□ -1.23
SCAF11-207ENST00000484275 MROH9Q5TGP6 573 aa7.35□□□□□ -1.23
SCAF11-207ENST00000484275 FAM126BQ8IXS8 530 aa7.35□□□□□ -1.23
SCAF11-207ENST00000484275 CNOT11Q9UKZ1 510 aaKnown RBP7.35□□□□□ -1.23
SCAF11-207ENST00000484275 ITGB3P05106 788 aa7.34□□□□□ -1.23
SCAF11-207ENST00000484275 TESK1Q15569 626 aa7.34□□□□□ -1.23
SCAF11-207ENST00000484275 TRMT2BQ96GJ1 504 aaKnown RBP7.34□□□□□ -1.23
SCAF11-207ENST00000484275 C1orf159Q96HA4 380 aa7.34□□□□□ -1.23
SCAF11-207ENST00000484275 CAPN10Q9HC96 672 aa7.34□□□□□ -1.23
SCAF11-207ENST00000484275 MEFVO15553 781 aaPredicted RBP7.33□□□□□ -1.24
SCAF11-207ENST00000484275 SSBP05455 408 aaKnown RBP eCLIP7.33□□□□□ -1.24
SCAF11-207ENST00000484275 GFRA1P56159 465 aa7.33□□□□□ -1.24
SCAF11-207ENST00000484275 KCNAB2Q13303 367 aa7.33□□□□□ -1.24
SCAF11-207ENST00000484275 ADAM9Q13443 819 aa7.33□□□□□ -1.24
SCAF11-207ENST00000484275 ACBD5Q5T8D3 534 aaPredicted RBP7.33□□□□□ -1.24
SCAF11-207ENST00000484275 TMEM145Q8NBT3 493 aa7.33□□□□□ -1.24
SCAF11-207ENST00000484275 TMEM169Q96HH4 297 aa7.33□□□□□ -1.24
SCAF11-207ENST00000484275 LRP2BPQ9P2M1 347 aa7.33□□□□□ -1.24
SCAF11-207ENST00000484275 PRKAG3Q9UGI9 489 aa7.33□□□□□ -1.24
SCAF11-207ENST00000484275 DDAH1O94760 285 aa7.32□□□□□ -1.24
SCAF11-207ENST00000484275 GRIA2P42262 883 aa7.32□□□□□ -1.24
SCAF11-207ENST00000484275 RBM10P98175 930 aaKnown RBP7.32□□□□□ -1.24
SCAF11-207ENST00000484275 TBC1D10BQ4KMP7 808 aaPredicted RBP7.32□□□□□ -1.24
SCAF11-207ENST00000484275 TNNI3KQ59H18 835 aa7.32□□□□□ -1.24
SCAF11-207ENST00000484275 MCTP2Q6DN12 878 aa7.32□□□□□ -1.24
SCAF11-207ENST00000484275 PPIL6Q8IXY8 311 aa7.32□□□□□ -1.24
SCAF11-207ENST00000484275 TTLL6Q8N841 843 aa7.32□□□□□ -1.24
SCAF11-207ENST00000484275 ZNF652Q9Y2D9 606 aa7.32□□□□□ -1.24
SCAF11-207ENST00000484275 PCDHA2Q9Y5H9 948 aa7.32□□□□□ -1.24
SCAF11-207ENST00000484275 DDX3XO00571 662 aaKnown RBP eCLIP7.31□□□□□ -1.24
SCAF11-207ENST00000484275 CPP00450 1065 aa7.31□□□□□ -1.24
SCAF11-207ENST00000484275 INSRRP14616 1297 aa7.31□□□□□ -1.24
SCAF11-207ENST00000484275 ERCC5P28715 1186 aaPredicted RBP7.31□□□□□ -1.24
SCAF11-207ENST00000484275 MAGEA10P43363 369 aaPredicted RBP7.31□□□□□ -1.24
SCAF11-207ENST00000484275 GTF2A2P52657 109 aa7.31□□□□□ -1.24
SCAF11-207ENST00000484275 ZXDCQ2QGD7 858 aaPredicted RBP7.31□□□□□ -1.24
SCAF11-207ENST00000484275 FAM26FQ5R3K3 315 aa7.31□□□□□ -1.24
SCAF11-207ENST00000484275 ZC3H18Q86VM9 953 aaKnown RBP7.31□□□□□ -1.24
SCAF11-207ENST00000484275 TXNDC5Q8NBS9 432 aaKnown RBP7.31□□□□□ -1.24
SCAF11-207ENST00000484275 ARRDC4Q8NCT1 418 aa7.31□□□□□ -1.24
SCAF11-207ENST00000484275 KRTAP3-1Q9BYR8 98 aa7.31□□□□□ -1.24
SCAF11-207ENST00000484275 PCDH18Q9HCL0 1135 aa7.31□□□□□ -1.24
SCAF11-207ENST00000484275 TCRBV5S2A0A599 114 aa7.3□□□□□ -1.24
SCAF11-207ENST00000484275 MYO1BO43795 1136 aa7.3□□□□□ -1.24
SCAF11-207ENST00000484275 GJB6O95452 261 aa7.3□□□□□ -1.24
SCAF11-207ENST00000484275 LTBRP36941 435 aa7.3□□□□□ -1.24
SCAF11-207ENST00000484275 KCNJ6P48051 423 aa7.3□□□□□ -1.24
SCAF11-207ENST00000484275 ZNF827Q17R98 1081 aa7.3□□□□□ -1.24
SCAF11-207ENST00000484275 SLC35F1Q5T1Q4 408 aa7.3□□□□□ -1.24
SCAF11-207ENST00000484275 CCDC140Q96MF4 163 aa7.3□□□□□ -1.24
SCAF11-207ENST00000484275 CDIP1Q9H305 208 aa7.3□□□□□ -1.24
SCAF11-207ENST00000484275 ZNF408Q9H9D4 720 aa7.3□□□□□ -1.24
SCAF11-207ENST00000484275 WASF3Q9UPY6 502 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms