RNA–Protein interactions for RNA: ENST00000484103.1

NDUFA3-213, Transcript of NADH:ubiquinone oxidoreductase subunit A3, humanhuman

TSL 1 (best)

Gene NDUFA3, Length 541 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA3-213ENST00000484103 COL9A3Q14050 684 aaPredicted RBP22.27■■□□□ 1.16
NDUFA3-213ENST00000484103 CASC1Q6TDU7 716 aa22.27■■□□□ 1.16
NDUFA3-213ENST00000484103 MTMR8Q96EF0 704 aa22.27■■□□□ 1.16
NDUFA3-213ENST00000484103 ZNF576Q9H609 170 aa22.27■■□□□ 1.16
NDUFA3-213ENST00000484103 ANO2Q9NQ90 1003 aa22.27■■□□□ 1.16
NDUFA3-213ENST00000484103 UNC80Q8N2C7 3258 aa22.27■■□□□ 1.16
NDUFA3-213ENST00000484103 KPNA6O60684 536 aa22.26■■□□□ 1.15
NDUFA3-213ENST00000484103 ZNF286BP0CG31 522 aa22.26■■□□□ 1.15
NDUFA3-213ENST00000484103 TROAPQ12815 778 aa22.26■■□□□ 1.15
NDUFA3-213ENST00000484103 PHF6Q8IWS0 365 aaKnown RBP eCLIP22.26■■□□□ 1.15
NDUFA3-213ENST00000484103 IGDCC4Q8TDY8 1250 aa22.26■■□□□ 1.15
NDUFA3-213ENST00000484103 HERVK_113Q902F9 699 aa22.26■■□□□ 1.15
NDUFA3-213ENST00000484103 PDCD2LQ9BRP1 358 aa22.26■■□□□ 1.15
NDUFA3-213ENST00000484103 ALG1Q9BT22 464 aa22.26■■□□□ 1.15
NDUFA3-213ENST00000484103 SEZ6LQ9BYH1 1024 aa22.26■■□□□ 1.15
NDUFA3-213ENST00000484103 LRRC2Q9BYS8 371 aa22.26■■□□□ 1.15
NDUFA3-213ENST00000484103 MTIF3Q9H2K0 278 aaKnown RBP22.26■■□□□ 1.15
NDUFA3-213ENST00000484103 DDX41Q9UJV9 622 aaKnown RBP22.26■■□□□ 1.15
NDUFA3-213ENST00000484103 BAZ2BQ9UIF8 2168 aaKnown RBP22.25■■□□□ 1.15
NDUFA3-213ENST00000484103 GCOM1H8Y6P7 765 aaPredicted RBP22.25■■□□□ 1.15
NDUFA3-213ENST00000484103 EIF3JO75822 258 aaKnown RBP22.25■■□□□ 1.15
NDUFA3-213ENST00000484103 POLR2MP0CAP2 368 aa22.25■■□□□ 1.15
NDUFA3-213ENST00000484103 RASIP1Q5U651 963 aa22.25■■□□□ 1.15
NDUFA3-213ENST00000484103 NFRKBQ6P4R8 1299 aa22.25■■□□□ 1.15
NDUFA3-213ENST00000484103 DHX37Q8IY37 1157 aaKnown RBP22.25■■□□□ 1.15
NDUFA3-213ENST00000484103 ZNF654Q8IZM8 581 aa22.25■■□□□ 1.15
NDUFA3-213ENST00000484103 CMTR1Q8N1G2 835 aaKnown RBP22.25■■□□□ 1.15
NDUFA3-213ENST00000484103 PPM1EQ8WY54 764 aa22.25■■□□□ 1.15
NDUFA3-213ENST00000484103 GPKOWQ92917 476 aaPredicted RBP eCLIP22.25■■□□□ 1.15
NDUFA3-213ENST00000484103 ESYT1Q9BSJ8 1104 aa22.25■■□□□ 1.15
NDUFA3-213ENST00000484103 LSG1Q9H089 658 aaKnown RBP22.25■■□□□ 1.15
NDUFA3-213ENST00000484103 NKX2-4Q9H2Z4 354 aa22.25■■□□□ 1.15
NDUFA3-213ENST00000484103 RIOX1Q9H6W3 641 aa22.25■■□□□ 1.15
NDUFA3-213ENST00000484103 LY9Q9HBG7 655 aa22.25■■□□□ 1.15
NDUFA3-213ENST00000484103 KIAA1217Q5T5P2 1943 aa22.25■■□□□ 1.15
NDUFA3-213ENST00000484103 PNMA6FA0A0J9YX94 578 aa22.24■■□□□ 1.15
NDUFA3-213ENST00000484103 SLC27A2O14975 620 aa22.24■■□□□ 1.15
NDUFA3-213ENST00000484103 PGM5Q15124 567 aa22.24■■□□□ 1.15
NDUFA3-213ENST00000484103 PTGISQ16647 500 aa22.24■■□□□ 1.15
NDUFA3-213ENST00000484103 RPUSD2Q8IZ73 545 aaKnown RBP22.24■■□□□ 1.15
NDUFA3-213ENST00000484103 RETREG2Q8NC44 543 aa22.24■■□□□ 1.15
NDUFA3-213ENST00000484103 CTCFLQ8NI51 663 aaPredicted RBP22.24■■□□□ 1.15
NDUFA3-213ENST00000484103 FTOQ9C0B1 505 aaKnown RBP eCLIP22.24■■□□□ 1.15
NDUFA3-213ENST00000484103 PRDM12Q9H4Q4 367 aa22.24■■□□□ 1.15
NDUFA3-213ENST00000484103 MSRAQ9UJ68 235 aa22.24■■□□□ 1.15
NDUFA3-213ENST00000484103 SCN5AQ14524 2016 aa22.24■■□□□ 1.15
NDUFA3-213ENST00000484103 SCN10AQ9Y5Y9 1956 aa22.23■■□□□ 1.15
NDUFA3-213ENST00000484103 CCDC69A6NI79 296 aa22.23■■□□□ 1.15
NDUFA3-213ENST00000484103 MYOGP15173 224 aa22.23■■□□□ 1.15
NDUFA3-213ENST00000484103 CASTP20810 708 aaKnown RBP22.23■■□□□ 1.15
NDUFA3-213ENST00000484103 DGKDQ16760 1214 aa22.23■■□□□ 1.15
NDUFA3-213ENST00000484103 GDF6Q6KF10 455 aaPredicted RBP22.23■■□□□ 1.15
NDUFA3-213ENST00000484103 KAT2BQ92831 832 aa22.23■■□□□ 1.15
NDUFA3-213ENST00000484103 SLC4A7Q9Y6M7 1214 aa22.23■■□□□ 1.15
NDUFA3-213ENST00000484103 A0A0C4DFX4 3053 aa22.23■■□□□ 1.15
NDUFA3-213ENST00000484103 TMEM265A0A087WTH1 108 aa22.22■■□□□ 1.15
NDUFA3-213ENST00000484103 hCG_1642624A0A1W2PR95 340 aa22.22■■□□□ 1.15
NDUFA3-213ENST00000484103 RGS20O76081 388 aa22.22■■□□□ 1.15
NDUFA3-213ENST00000484103 PLEKHA8P1O95397 391 aa22.22■■□□□ 1.15
NDUFA3-213ENST00000484103 GGPS1O95749 300 aa22.22■■□□□ 1.15
NDUFA3-213ENST00000484103 CCND2P30279 289 aa22.22■■□□□ 1.15
NDUFA3-213ENST00000484103 CREB3L3Q68CJ9 461 aa22.22■■□□□ 1.15
NDUFA3-213ENST00000484103 CCDC82Q8N4S0 544 aa22.22■■□□□ 1.15
NDUFA3-213ENST00000484103 VWCEQ96DN2 955 aa22.22■■□□□ 1.15
NDUFA3-213ENST00000484103 MAF1Q9H063 256 aa22.22■■□□□ 1.15
NDUFA3-213ENST00000484103 RTEL1Q9NZ71 1219 aa22.22■■□□□ 1.15
NDUFA3-213ENST00000484103 YBX2Q9Y2T7 364 aaKnown RBP22.22■■□□□ 1.15
NDUFA3-213ENST00000484103 MCM5P33992 734 aa22.21■■□□□ 1.15
NDUFA3-213ENST00000484103 PSEN2P49810 448 aa22.21■■□□□ 1.15
NDUFA3-213ENST00000484103 C7orf31Q8N865 590 aa22.21■■□□□ 1.15
NDUFA3-213ENST00000484103 RRP36Q96EU6 259 aaKnown RBP22.21■■□□□ 1.15
NDUFA3-213ENST00000484103 SPATA33Q96N06 139 aa22.21■■□□□ 1.15
NDUFA3-213ENST00000484103 GBF1Q92538 1859 aa22.21■■□□□ 1.15
NDUFA3-213ENST00000484103 SH2B2O14492 632 aaPredicted RBP22.2■■□□□ 1.14
NDUFA3-213ENST00000484103 IQCF3P0C7M6 154 aa22.2■■□□□ 1.14
NDUFA3-213ENST00000484103 KIF5BP33176 963 aa22.2■■□□□ 1.14
NDUFA3-213ENST00000484103 SP2Q02086 613 aa22.2■■□□□ 1.14
NDUFA3-213ENST00000484103 LAMC2Q13753 1193 aa22.2■■□□□ 1.14
NDUFA3-213ENST00000484103 MFSD10Q14728 455 aa22.2■■□□□ 1.14
NDUFA3-213ENST00000484103 SMARCC2Q8TAQ2 1214 aa22.2■■□□□ 1.14
NDUFA3-213ENST00000484103 HDAC6Q9UBN7 1215 aa22.2■■□□□ 1.14
NDUFA3-213ENST00000484103 SEC63Q9UGP8 760 aaKnown RBP22.2■■□□□ 1.14
NDUFA3-213ENST00000484103 PRUNE2Q8WUY3 3088 aa22.19■■□□□ 1.14
NDUFA3-213ENST00000484103 DDAH1O94760 285 aa22.19■■□□□ 1.14
NDUFA3-213ENST00000484103 ATP2A2P16615 1042 aaKnown RBP22.19■■□□□ 1.14
NDUFA3-213ENST00000484103 UBA1P22314 1058 aaKnown RBP22.19■■□□□ 1.14
NDUFA3-213ENST00000484103 IGFBP4P22692 258 aa22.19■■□□□ 1.14
NDUFA3-213ENST00000484103 ZNF200P98182 395 aaPredicted RBP22.19■■□□□ 1.14
NDUFA3-213ENST00000484103 GHRHRQ02643 423 aa22.19■■□□□ 1.14
NDUFA3-213ENST00000484103 PTPN11Q06124 597 aaPredicted RBP22.19■■□□□ 1.14
NDUFA3-213ENST00000484103 TRAF1Q13077 416 aa22.19■■□□□ 1.14
NDUFA3-213ENST00000484103 BFSP2Q13515 415 aa22.19■■□□□ 1.14
NDUFA3-213ENST00000484103 RAB30Q15771 203 aa22.19■■□□□ 1.14
NDUFA3-213ENST00000484103 KIAA0753Q2KHM9 967 aa22.19■■□□□ 1.14
NDUFA3-213ENST00000484103 HSDL1Q3SXM5 330 aa22.19■■□□□ 1.14
NDUFA3-213ENST00000484103 USP17L6PQ6QN14 398 aa22.19■■□□□ 1.14
NDUFA3-213ENST00000484103 VSIG10LQ86VR7 867 aa22.19■■□□□ 1.14
NDUFA3-213ENST00000484103 PPTC7Q8NI37 304 aa22.19■■□□□ 1.14
NDUFA3-213ENST00000484103 GAS2L1Q99501 681 aaPredicted RBP22.19■■□□□ 1.14
NDUFA3-213ENST00000484103 BCAS3Q9H6U6 928 aa22.19■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms