RNA–Protein interactions for RNA: ENST00000483778.5

ATG4B-221, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 3

Gene ATG4B, Length 1,103 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-221ENST00000483778 TANC1Q9C0D5 1861 aa20.97■□□□□ 0.95
ATG4B-221ENST00000483778 E7EWF7 191 aa20.97■□□□□ 0.95
ATG4B-221ENST00000483778 IFIT3O14879 490 aaKnown RBP20.97■□□□□ 0.95
ATG4B-221ENST00000483778 RGS20O76081 388 aa20.97■□□□□ 0.95
ATG4B-221ENST00000483778 GH1P01241 217 aa20.97■□□□□ 0.95
ATG4B-221ENST00000483778 MMP3P08254 477 aa20.97■□□□□ 0.95
ATG4B-221ENST00000483778 ANTXR2P58335 489 aa20.97■□□□□ 0.95
ATG4B-221ENST00000483778 GRM4Q14833 912 aa20.97■□□□□ 0.95
ATG4B-221ENST00000483778 RPUSD2Q8IZ73 545 aaKnown RBP20.97■□□□□ 0.95
ATG4B-221ENST00000483778 IL31RAQ8NI17 732 aa20.97■□□□□ 0.95
ATG4B-221ENST00000483778 PIGSQ96S52 555 aa20.97■□□□□ 0.95
ATG4B-221ENST00000483778 PCDHA1Q9Y5I3 950 aa20.97■□□□□ 0.95
ATG4B-221ENST00000483778 ZBTB5O15062 677 aa20.96■□□□□ 0.95
ATG4B-221ENST00000483778 SGSM2O43147 1006 aa20.96■□□□□ 0.95
ATG4B-221ENST00000483778 SORBS3O60504 671 aa20.96■□□□□ 0.95
ATG4B-221ENST00000483778 BRDTQ58F21 947 aaPredicted RBP20.96■□□□□ 0.95
ATG4B-221ENST00000483778 GDF6Q6KF10 455 aaPredicted RBP20.96■□□□□ 0.95
ATG4B-221ENST00000483778 HOMER1Q86YM7 354 aa20.96■□□□□ 0.95
ATG4B-221ENST00000483778 MAF1Q9H063 256 aa20.96■□□□□ 0.95
ATG4B-221ENST00000483778 BCAS3Q9H6U6 928 aa20.96■□□□□ 0.95
ATG4B-221ENST00000483778 RIOX1Q9H6W3 641 aa20.96■□□□□ 0.95
ATG4B-221ENST00000483778 MSRAQ9UJ68 235 aa20.96■□□□□ 0.95
ATG4B-221ENST00000483778 U3KPZ7 1027 aaPredicted RBP20.96■□□□□ 0.95
ATG4B-221ENST00000483778 RAD50Q92878 1312 aa20.96■□□□□ 0.95
ATG4B-221ENST00000483778 EIF3JO75822 258 aaKnown RBP20.95■□□□□ 0.94
ATG4B-221ENST00000483778 IQCF3P0C7M6 154 aa20.95■□□□□ 0.94
ATG4B-221ENST00000483778 MYCLP12524 364 aaPredicted RBP20.95■□□□□ 0.94
ATG4B-221ENST00000483778 GHRHRQ02643 423 aa20.95■□□□□ 0.94
ATG4B-221ENST00000483778 TROAPQ12815 778 aa20.95■□□□□ 0.94
ATG4B-221ENST00000483778 GPNMBQ14956 572 aa20.95■□□□□ 0.94
ATG4B-221ENST00000483778 IGDCC4Q8TDY8 1250 aa20.95■□□□□ 0.94
ATG4B-221ENST00000483778 RUFY2Q8WXA3 655 aa20.95■□□□□ 0.94
ATG4B-221ENST00000483778 PPM1EQ8WY54 764 aa20.95■□□□□ 0.94
ATG4B-221ENST00000483778 GPKOWQ92917 476 aaPredicted RBP eCLIP20.95■□□□□ 0.94
ATG4B-221ENST00000483778 PDCD2LQ9BRP1 358 aa20.95■□□□□ 0.94
ATG4B-221ENST00000483778 SLC4A7Q9Y6M7 1214 aa20.95■□□□□ 0.94
ATG4B-221ENST00000483778 ZBBXA8MT70 800 aa20.94■□□□□ 0.94
ATG4B-221ENST00000483778 SP2Q02086 613 aa20.94■□□□□ 0.94
ATG4B-221ENST00000483778 TRDNQ13061 729 aa20.94■□□□□ 0.94
ATG4B-221ENST00000483778 PIBF1Q8WXW3 757 aa20.94■□□□□ 0.94
ATG4B-221ENST00000483778 DHX38Q92620 1227 aaKnown RBP20.94■□□□□ 0.94
ATG4B-221ENST00000483778 MAP4K1Q92918 833 aa20.94■□□□□ 0.94
ATG4B-221ENST00000483778 PTPN11Q06124 597 aaPredicted RBP20.93■□□□□ 0.94
ATG4B-221ENST00000483778 HIC1Q14526 733 aa20.93■□□□□ 0.94
ATG4B-221ENST00000483778 RAB30Q15771 203 aa20.93■□□□□ 0.94
ATG4B-221ENST00000483778 PTGISQ16647 500 aa20.93■□□□□ 0.94
ATG4B-221ENST00000483778 SKAP1Q86WV1 359 aa20.93■□□□□ 0.94
ATG4B-221ENST00000483778 TRANK1O15050 2925 aa20.93■□□□□ 0.94
ATG4B-221ENST00000483778 TTC28Q96AY4 2481 aa20.92■□□□□ 0.94
ATG4B-221ENST00000483778 ZNF286BP0CG31 522 aa20.92■□□□□ 0.94
ATG4B-221ENST00000483778 ZNF200P98182 395 aaPredicted RBP20.92■□□□□ 0.94
ATG4B-221ENST00000483778 WTAPQ15007 396 aa20.92■□□□□ 0.94
ATG4B-221ENST00000483778 PGM5Q15124 567 aa20.92■□□□□ 0.94
ATG4B-221ENST00000483778 TCTN1Q2MV58 587 aa20.92■□□□□ 0.94
ATG4B-221ENST00000483778 TMEM67Q5HYA8 995 aa20.92■□□□□ 0.94
ATG4B-221ENST00000483778 VSIG10LQ86VR7 867 aa20.92■□□□□ 0.94
ATG4B-221ENST00000483778 FCHSD1Q86WN1 690 aa20.92■□□□□ 0.94
ATG4B-221ENST00000483778 MB21D2Q8IYB1 491 aaPredicted RBP20.92■□□□□ 0.94
ATG4B-221ENST00000483778 NCOA7Q8NI08 942 aa20.92■□□□□ 0.94
ATG4B-221ENST00000483778 ALG1Q9BT22 464 aa20.92■□□□□ 0.94
ATG4B-221ENST00000483778 MYL10Q9BUA6 226 aa20.92■□□□□ 0.94
ATG4B-221ENST00000483778 MTIF3Q9H2K0 278 aaKnown RBP20.92■□□□□ 0.94
ATG4B-221ENST00000483778 SLC28A3Q9HAS3 691 aa20.92■□□□□ 0.94
ATG4B-221ENST00000483778 HDAC6Q9UBN7 1215 aa20.92■□□□□ 0.94
ATG4B-221ENST00000483778 RBM8AQ9Y5S9 174 aaKnown RBP20.92■□□□□ 0.94
ATG4B-221ENST00000483778 MRVI1Q9Y6F6 885 aa20.92■□□□□ 0.94
ATG4B-221ENST00000483778 PITPNM1O00562 1244 aa20.91■□□□□ 0.94
ATG4B-221ENST00000483778 ARHGEF15O94989 841 aa20.91■□□□□ 0.94
ATG4B-221ENST00000483778 ATP2A2P16615 1042 aaKnown RBP20.91■□□□□ 0.94
ATG4B-221ENST00000483778 CASTP20810 708 aaKnown RBP20.91■□□□□ 0.94
ATG4B-221ENST00000483778 PSEN2P49810 448 aa20.91■□□□□ 0.94
ATG4B-221ENST00000483778 CCDC85BQ15834 202 aaPredicted RBP20.91■□□□□ 0.94
ATG4B-221ENST00000483778 PRRC2BQ5JSZ5 2229 aaKnown RBP20.91■□□□□ 0.94
ATG4B-221ENST00000483778 DHX37Q8IY37 1157 aaKnown RBP20.91■□□□□ 0.94
ATG4B-221ENST00000483778 RETREG2Q8NC44 543 aa20.91■□□□□ 0.94
ATG4B-221ENST00000483778 WNT8BQ93098 351 aa20.91■□□□□ 0.94
ATG4B-221ENST00000483778 EMID1Q96A84 441 aaPredicted RBP20.91■□□□□ 0.94
ATG4B-221ENST00000483778 PNMA6FA0A0J9YX94 578 aa20.9■□□□□ 0.94
ATG4B-221ENST00000483778 HAS3O00219 553 aa20.9■□□□□ 0.94
ATG4B-221ENST00000483778 RFXAPO00287 272 aa20.9■□□□□ 0.94
ATG4B-221ENST00000483778 IGFBP4P22692 258 aa20.9■□□□□ 0.94
ATG4B-221ENST00000483778 DGKDQ16760 1214 aa20.9■□□□□ 0.94
ATG4B-221ENST00000483778 HSDL1Q3SXM5 330 aa20.9■□□□□ 0.94
ATG4B-221ENST00000483778 MYSM1Q5VVJ2 828 aa20.9■□□□□ 0.94
ATG4B-221ENST00000483778 RALYLQ86SE5 291 aaKnown RBP20.9■□□□□ 0.94
ATG4B-221ENST00000483778 SESTD1Q86VW0 696 aa20.9■□□□□ 0.94
ATG4B-221ENST00000483778 GAS2L1Q99501 681 aaPredicted RBP20.9■□□□□ 0.94
ATG4B-221ENST00000483778 FTOQ9C0B1 505 aaKnown RBP eCLIP20.9■□□□□ 0.94
ATG4B-221ENST00000483778 PCDHA11Q9Y5I1 949 aa20.9■□□□□ 0.94
ATG4B-221ENST00000483778 LAMC2Q13753 1193 aa20.89■□□□□ 0.93
ATG4B-221ENST00000483778 CELF3Q5SZQ8 465 aaKnown RBP20.89■□□□□ 0.93
ATG4B-221ENST00000483778 TMCO2Q7Z6W1 182 aaPredicted RBP20.89■□□□□ 0.93
ATG4B-221ENST00000483778 PPTC7Q8NI37 304 aa20.89■□□□□ 0.93
ATG4B-221ENST00000483778 LY9Q9HBG7 655 aa20.89■□□□□ 0.93
ATG4B-221ENST00000483778 NOD1Q9Y239 953 aa20.89■□□□□ 0.93
ATG4B-221ENST00000483778 TELO2Q9Y4R8 837 aa20.89■□□□□ 0.93
ATG4B-221ENST00000483778 TCF20Q9UGU0 1960 aaKnown RBP20.88■□□□□ 0.93
ATG4B-221ENST00000483778 SPTBN5Q9NRC6 3674 aaKnown RBP20.88■□□□□ 0.93
ATG4B-221ENST00000483778 ERICH2A1L162 156 aa20.88■□□□□ 0.93
ATG4B-221ENST00000483778 GCOM1H8Y6P7 765 aaPredicted RBP20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms