RNA–Protein interactions for RNA: ENST00000483407.1

CSDE1-207, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-207ENST00000483407 UNC80Q8N2C7 3258 aa7.06□□□□□ -1.28
CSDE1-207ENST00000483407 SIPA1L1O43166 1804 aa7.06□□□□□ -1.28
CSDE1-207ENST00000483407 TNFRSF10AO00220 468 aa7.05□□□□□ -1.28
CSDE1-207ENST00000483407 WDR46O15213 610 aaKnown RBP7.05□□□□□ -1.28
CSDE1-207ENST00000483407 FZD6O60353 706 aa7.05□□□□□ -1.28
CSDE1-207ENST00000483407 FLOT1O75955 427 aa7.05□□□□□ -1.28
CSDE1-207ENST00000483407 SLC25A27O95847 323 aa7.05□□□□□ -1.28
CSDE1-207ENST00000483407 FCER1AP12319 257 aa7.05□□□□□ -1.28
CSDE1-207ENST00000483407 RNF144AP50876 292 aaPredicted RBP7.05□□□□□ -1.28
CSDE1-207ENST00000483407 C11orf91Q3C1V1 193 aa7.05□□□□□ -1.28
CSDE1-207ENST00000483407 FAM26DQ5JW98 314 aa7.05□□□□□ -1.28
CSDE1-207ENST00000483407 GJC2Q5T442 439 aaPredicted RBP7.05□□□□□ -1.28
CSDE1-207ENST00000483407 C1orf53Q5VUE5 145 aa7.05□□□□□ -1.28
CSDE1-207ENST00000483407 TMEM214Q6NUQ4 689 aaKnown RBP7.05□□□□□ -1.28
CSDE1-207ENST00000483407 SLC39A5Q6ZMH5 540 aa7.05□□□□□ -1.28
CSDE1-207ENST00000483407 TMC7Q7Z402 723 aa7.05□□□□□ -1.28
CSDE1-207ENST00000483407 ABRAQ8N0Z2 381 aa7.05□□□□□ -1.28
CSDE1-207ENST00000483407 LCORLQ8N3X6 602 aa7.05□□□□□ -1.28
CSDE1-207ENST00000483407 TRPV1Q8NER1 839 aa7.05□□□□□ -1.28
CSDE1-207ENST00000483407 MRRFQ96E11 262 aaKnown RBP7.05□□□□□ -1.28
CSDE1-207ENST00000483407 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.05□□□□□ -1.289e-6■□□□□ 8.3
CSDE1-207ENST00000483407 BCL11AQ9H165 835 aa7.05□□□□□ -1.28
CSDE1-207ENST00000483407 VCPKMTQ9H867 229 aa7.05□□□□□ -1.28
CSDE1-207ENST00000483407 PRDM5Q9NQX1 630 aaPredicted RBP7.05□□□□□ -1.28
CSDE1-207ENST00000483407 ATP8A2Q9NTI2 1148 aa7.05□□□□□ -1.28
CSDE1-207ENST00000483407 KIAA1522Q9P206 1035 aaPredicted RBP7.05□□□□□ -1.28
CSDE1-207ENST00000483407 BRPF3Q9ULD4 1205 aa7.05□□□□□ -1.28
CSDE1-207ENST00000483407 ZNF232Q9UNY5 417 aa7.05□□□□□ -1.28
CSDE1-207ENST00000483407 TMX2Q9Y320 296 aa7.05□□□□□ -1.28
CSDE1-207ENST00000483407 HCN4Q9Y3Q4 1203 aa7.05□□□□□ -1.28
CSDE1-207ENST00000483407 PLXNB2O15031 1838 aa7.04□□□□□ -1.28
CSDE1-207ENST00000483407 TCRBV5S4A2TA0A5A2 114 aa7.04□□□□□ -1.28
CSDE1-207ENST00000483407 ZBTB39O15060 712 aa7.04□□□□□ -1.28
CSDE1-207ENST00000483407 COBLO75128 1261 aa7.04□□□□□ -1.28
CSDE1-207ENST00000483407 RAB11FIP3O75154 756 aa7.04□□□□□ -1.28
CSDE1-207ENST00000483407 IGHA2P01877 340 aa7.04□□□□□ -1.28
CSDE1-207ENST00000483407 CYP2D6P10635 497 aa7.04□□□□□ -1.28
CSDE1-207ENST00000483407 RARBP10826 455 aa7.04□□□□□ -1.28
CSDE1-207ENST00000483407 COPB2P35606 906 aa7.04□□□□□ -1.28
CSDE1-207ENST00000483407 ANO1Q5XXA6 986 aa7.04□□□□□ -1.28
CSDE1-207ENST00000483407 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.04□□□□□ -1.28
CSDE1-207ENST00000483407 RPAP2Q8IXW5 612 aaPredicted RBP7.04□□□□□ -1.28
CSDE1-207ENST00000483407 SPICE1Q8N0Z3 855 aa7.04□□□□□ -1.28
CSDE1-207ENST00000483407 SLC44A5Q8NCS7 719 aa7.04□□□□□ -1.28
CSDE1-207ENST00000483407 PANK1Q8TE04 598 aa7.04□□□□□ -1.28
CSDE1-207ENST00000483407 HPS1Q92902 700 aa7.04□□□□□ -1.28
CSDE1-207ENST00000483407 ATG4CQ96DT6 458 aa7.04□□□□□ -1.28
CSDE1-207ENST00000483407 DYNLL2Q96FJ2 89 aa7.04□□□□□ -1.28
CSDE1-207ENST00000483407 MAML3Q96JK9 1138 aa7.04□□□□□ -1.28
CSDE1-207ENST00000483407 FAM161BQ96MY7 647 aa7.04□□□□□ -1.28
CSDE1-207ENST00000483407 MMP19Q99542 508 aa7.04□□□□□ -1.28
CSDE1-207ENST00000483407 TSEN34Q9BSV6 310 aaKnown RBP7.04□□□□□ -1.28
CSDE1-207ENST00000483407 CHMP4BQ9H444 224 aaKnown RBP7.04□□□□□ -1.28
CSDE1-207ENST00000483407 ARMT1Q9H993 441 aa7.04□□□□□ -1.28
CSDE1-207ENST00000483407 PAG1Q9NWQ8 432 aa7.04□□□□□ -1.28
CSDE1-207ENST00000483407 NRBP1Q9UHY1 535 aa7.04□□□□□ -1.28
CSDE1-207ENST00000483407 ALPK3Q96L96 1907 aa7.03□□□□□ -1.28
CSDE1-207ENST00000483407 SPINT1O43278 529 aa7.03□□□□□ -1.28
CSDE1-207ENST00000483407 TREHO43280 583 aa7.03□□□□□ -1.28
CSDE1-207ENST00000483407 MBD4O95243 580 aa7.03□□□□□ -1.28
CSDE1-207ENST00000483407 AKR1B1P15121 316 aa7.03□□□□□ -1.28
CSDE1-207ENST00000483407 ADD2P35612 726 aa7.03□□□□□ -1.28
CSDE1-207ENST00000483407 STAT3P40763 770 aa7.03□□□□□ -1.28
CSDE1-207ENST00000483407 ADCYAP1R1P41586 468 aa7.03□□□□□ -1.28
CSDE1-207ENST00000483407 CDK8P49336 464 aa7.03□□□□□ -1.28
CSDE1-207ENST00000483407 KCTD2Q14681 263 aa7.03□□□□□ -1.28
CSDE1-207ENST00000483407 TMEM132BQ14DG7 1078 aa7.03□□□□□ -1.28
CSDE1-207ENST00000483407 SNX17Q15036 470 aa7.03□□□□□ -1.28
CSDE1-207ENST00000483407 LRRC41Q15345 812 aa7.03□□□□□ -1.28
CSDE1-207ENST00000483407 TRIM60Q495X7 471 aa7.03□□□□□ -1.28
CSDE1-207ENST00000483407 FAM47AQ5JRC9 791 aa7.03□□□□□ -1.28
CSDE1-207ENST00000483407 PRAMEF19Q5SWL8 479 aa7.03□□□□□ -1.28
CSDE1-207ENST00000483407 C12orf60Q5U649 245 aa7.03□□□□□ -1.28
CSDE1-207ENST00000483407 RNF180Q86T96 592 aa7.03□□□□□ -1.28
CSDE1-207ENST00000483407 FERMT2Q96AC1 680 aa7.03□□□□□ -1.28
CSDE1-207ENST00000483407 GUCD1Q96NT3 240 aa7.03□□□□□ -1.28
CSDE1-207ENST00000483407 PHACTR1Q9C0D0 580 aa7.03□□□□□ -1.28
CSDE1-207ENST00000483407 BOLA2Q9H3K6 86 aa7.03□□□□□ -1.28
CSDE1-207ENST00000483407 KANSL2Q9H9L4 492 aa7.03□□□□□ -1.28
CSDE1-207ENST00000483407 XPNPEP3Q9NQH7 507 aa7.03□□□□□ -1.28
CSDE1-207ENST00000483407 IGSF5Q9NSI5 407 aa7.03□□□□□ -1.28
CSDE1-207ENST00000483407 DDX19BQ9UMR2 479 aa7.03□□□□□ -1.28
CSDE1-207ENST00000483407 DIS3Q9Y2L1 958 aaKnown RBP7.03□□□□□ -1.28
CSDE1-207ENST00000483407 TACC3Q9Y6A5 838 aa7.03□□□□□ -1.28
CSDE1-207ENST00000483407 FOCADQ5VW36 1801 aa7.02□□□□□ -1.29
CSDE1-207ENST00000483407 PRKAB2O43741 272 aa7.02□□□□□ -1.29
CSDE1-207ENST00000483407 EEF2P13639 858 aaKnown RBP7.02□□□□□ -1.29
CSDE1-207ENST00000483407 AKR1A1P14550 325 aa7.02□□□□□ -1.29
CSDE1-207ENST00000483407 ATP5JP18859 108 aa7.02□□□□□ -1.29
CSDE1-207ENST00000483407 SMAD3P84022 425 aaKnown RBP7.02□□□□□ -1.29
CSDE1-207ENST00000483407 TAGLNQ01995 201 aaKnown RBP7.02□□□□□ -1.29
CSDE1-207ENST00000483407 AAMPQ13685 434 aa7.02□□□□□ -1.29
CSDE1-207ENST00000483407 UBE3CQ15386 1083 aa7.02□□□□□ -1.29
CSDE1-207ENST00000483407 SHHQ15465 462 aa7.02□□□□□ -1.29
CSDE1-207ENST00000483407 KIAA1755Q5JYT7 1200 aa7.02□□□□□ -1.29
CSDE1-207ENST00000483407 ZSCAN25Q6NSZ9 544 aa7.02□□□□□ -1.29
CSDE1-207ENST00000483407 C16orf86Q6ZW13 317 aa7.02□□□□□ -1.29
CSDE1-207ENST00000483407 RIOX2Q8IUF8 465 aa7.02□□□□□ -1.29
CSDE1-207ENST00000483407 CLEC10AQ8IUN9 316 aa7.02□□□□□ -1.29
CSDE1-207ENST00000483407 SIAH1Q8IUQ4 282 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms