RNA–Protein interactions for RNA: ENST00000481849.5

HLA-B-253, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 753 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-253ENST00000481849 ALAS1P13196 640 aa10.64□□□□□ -0.71
HLA-B-253ENST00000481849 ITGB8P26012 769 aa10.64□□□□□ -0.71
HLA-B-253ENST00000481849 CTHP32929 405 aa10.64□□□□□ -0.71
HLA-B-253ENST00000481849 STAT2P52630 851 aa10.64□□□□□ -0.71
HLA-B-253ENST00000481849 ACLYP53396 1101 aa10.64□□□□□ -0.71
HLA-B-253ENST00000481849 NFX1Q12986 1120 aaKnown RBP10.64□□□□□ -0.71
HLA-B-253ENST00000481849 ACVR2BQ13705 512 aa10.64□□□□□ -0.71
HLA-B-253ENST00000481849 RRP12Q5JTH9 1297 aaKnown RBP10.64□□□□□ -0.71
HLA-B-253ENST00000481849 MSL3Q8N5Y2 521 aaKnown RBP10.64□□□□□ -0.71
HLA-B-253ENST00000481849 CHST13Q8NET6 341 aa10.64□□□□□ -0.71
HLA-B-253ENST00000481849 ADAMTS19Q8TE59 1207 aa10.64□□□□□ -0.71
HLA-B-253ENST00000481849 VTI1AQ96AJ9 217 aa10.64□□□□□ -0.71
HLA-B-253ENST00000481849 EVI5LQ96CN4 794 aa10.64□□□□□ -0.71
HLA-B-253ENST00000481849 FAM227BQ96M60 508 aa10.64□□□□□ -0.71
HLA-B-253ENST00000481849 FGD4Q96M96 766 aa10.64□□□□□ -0.71
HLA-B-253ENST00000481849 CDX2Q99626 313 aaPredicted RBP10.64□□□□□ -0.71
HLA-B-253ENST00000481849 STARD7Q9NQZ5 370 aa10.64□□□□□ -0.71
HLA-B-253ENST00000481849 IL17RBQ9NRM6 502 aa10.64□□□□□ -0.71
HLA-B-253ENST00000481849 RNF146Q9NTX7 359 aa10.64□□□□□ -0.71
HLA-B-253ENST00000481849 TMEM39AQ9NV64 488 aa10.64□□□□□ -0.71
HLA-B-253ENST00000481849 FBXO40Q9UH90 709 aa10.64□□□□□ -0.71
HLA-B-253ENST00000481849 SYNPO2Q9UMS6 1093 aa10.64□□□□□ -0.71
HLA-B-253ENST00000481849 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.64□□□□□ -0.71
HLA-B-253ENST00000481849 PLIN4Q96Q06 1357 aa10.64□□□□□ -0.71
HLA-B-253ENST00000481849 FRMPD3Q5JV73 1810 aa10.63□□□□□ -0.71
HLA-B-253ENST00000481849 C6orf222P0C671 652 aaPredicted RBP10.63□□□□□ -0.71
HLA-B-253ENST00000481849 RAG1P15918 1043 aa10.63□□□□□ -0.71
HLA-B-253ENST00000481849 OAZ1P54368 228 aa10.63□□□□□ -0.71
HLA-B-253ENST00000481849 EPHB4P54760 987 aa10.63□□□□□ -0.71
HLA-B-253ENST00000481849 KCNA10Q16322 511 aa10.63□□□□□ -0.71
HLA-B-253ENST00000481849 CCDC96Q2M329 555 aa10.63□□□□□ -0.71
HLA-B-253ENST00000481849 CCDC144BQ3MJ40 725 aa10.63□□□□□ -0.71
HLA-B-253ENST00000481849 C1orf53Q5VUE5 145 aa10.63□□□□□ -0.71
HLA-B-253ENST00000481849 B4GALNT3Q6L9W6 998 aa10.63□□□□□ -0.71
HLA-B-253ENST00000481849 MAMDC4Q6UXC1 1216 aa10.63□□□□□ -0.71
HLA-B-253ENST00000481849 NOL8Q76FK4 1167 aaKnown RBP10.63□□□□□ -0.71
HLA-B-253ENST00000481849 ARMCX2Q7L311 632 aa10.63□□□□□ -0.71
HLA-B-253ENST00000481849 FAM160B2Q86V87 743 aa10.63□□□□□ -0.71
HLA-B-253ENST00000481849 PARP9Q8IXQ6 854 aa10.63□□□□□ -0.71
HLA-B-253ENST00000481849 CCDC144CPQ8IYA2 1237 aa10.63□□□□□ -0.71
HLA-B-253ENST00000481849 CHURC1Q8WUH1 139 aa10.63□□□□□ -0.71
HLA-B-253ENST00000481849 STAG1Q8WVM7 1258 aa10.63□□□□□ -0.71
HLA-B-253ENST00000481849 GMCL1Q96IK5 515 aa10.63□□□□□ -0.71
HLA-B-253ENST00000481849 TRERF1Q96PN7 1200 aa10.63□□□□□ -0.71
HLA-B-253ENST00000481849 UHRF1Q96T88 793 aaPredicted RBP10.63□□□□□ -0.71
HLA-B-253ENST00000481849 ACAD9Q9H845 621 aa10.63□□□□□ -0.71
HLA-B-253ENST00000481849 ZNF536O15090 1300 aa10.62□□□□□ -0.71
HLA-B-253ENST00000481849 A0A0D9SFI3 127 aa10.62□□□□□ -0.71
HLA-B-253ENST00000481849 TERTO14746 1132 aaKnown RBP10.62□□□□□ -0.71
HLA-B-253ENST00000481849 DUSP11O75319 330 aaKnown RBP10.62□□□□□ -0.71
HLA-B-253ENST00000481849 SLC16A2P36021 539 aa10.62□□□□□ -0.71
HLA-B-253ENST00000481849 PDE1AP54750 535 aa10.62□□□□□ -0.71
HLA-B-253ENST00000481849 HAND2P61296 217 aa10.62□□□□□ -0.71
HLA-B-253ENST00000481849 COL9A2Q14055 689 aaPredicted RBP10.62□□□□□ -0.71
HLA-B-253ENST00000481849 MUM1L1Q5H9M0 696 aa10.62□□□□□ -0.71
HLA-B-253ENST00000481849 GNASQ5JWF2 1037 aa10.62□□□□□ -0.71
HLA-B-253ENST00000481849 TTBK2Q6IQ55 1244 aa10.62□□□□□ -0.71
HLA-B-253ENST00000481849 RCSD1Q6JBY9 416 aa10.62□□□□□ -0.71
HLA-B-253ENST00000481849 EEPD1Q7L9B9 569 aa10.62□□□□□ -0.71
HLA-B-253ENST00000481849 ZNF511Q8NB15 262 aa10.62□□□□□ -0.71
HLA-B-253ENST00000481849 NUP133Q8WUM0 1156 aa10.62□□□□□ -0.71
HLA-B-253ENST00000481849 GLT1D1Q96MS3 346 aa10.62□□□□□ -0.71
HLA-B-253ENST00000481849 PURBQ96QR8 312 aaKnown RBP10.62□□□□□ -0.71
HLA-B-253ENST00000481849 TSEN34Q9BSV6 310 aaKnown RBP10.62□□□□□ -0.71
HLA-B-253ENST00000481849 LNPKQ9C0E8 428 aa10.62□□□□□ -0.71
HLA-B-253ENST00000481849 ABHD16BQ9H3Z7 469 aa10.62□□□□□ -0.71
HLA-B-253ENST00000481849 SPC25Q9HBM1 224 aa10.62□□□□□ -0.71
HLA-B-253ENST00000481849 A1CFQ9NQ94 594 aaKnown RBP10.62□□□□□ -0.71
HLA-B-253ENST00000481849 HELLSQ9NRZ9 838 aa10.62□□□□□ -0.71
HLA-B-253ENST00000481849 PRR12Q9ULL5 1215 aa10.62□□□□□ -0.71
HLA-B-253ENST00000481849 FRMPD2Q68DX3 1309 aaPredicted RBP10.61□□□□□ -0.71
HLA-B-253ENST00000481849 MYH8P13535 1937 aa10.61□□□□□ -0.71
HLA-B-253ENST00000481849 GREB1LQ9C091 1923 aaPredicted RBP10.61□□□□□ -0.71
HLA-B-253ENST00000481849 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.61□□□□□ -0.71
HLA-B-253ENST00000481849 DCDC2CA8MYV0 355 aa10.61□□□□□ -0.71
HLA-B-253ENST00000481849 KIAA0355O15063 1070 aa10.61□□□□□ -0.71
HLA-B-253ENST00000481849 ASGR1P07306 291 aa10.61□□□□□ -0.71
HLA-B-253ENST00000481849 PTGS1P23219 599 aa10.61□□□□□ -0.71
HLA-B-253ENST00000481849 VARSP26640 1264 aaKnown RBP10.61□□□□□ -0.71
HLA-B-253ENST00000481849 BEX3Q00994 111 aa10.61□□□□□ -0.71
HLA-B-253ENST00000481849 FPGSQ05932 587 aa10.61□□□□□ -0.71
HLA-B-253ENST00000481849 FAAP100Q0VG06 881 aa10.61□□□□□ -0.71
HLA-B-253ENST00000481849 NMIQ13287 307 aaPredicted RBP10.61□□□□□ -0.71
HLA-B-253ENST00000481849 MCMDC2Q4G0Z9 681 aa10.61□□□□□ -0.71
HLA-B-253ENST00000481849 CCSAPQ6IQ19 270 aaPredicted RBP10.61□□□□□ -0.71
HLA-B-253ENST00000481849 NSMFQ6X4W1 530 aa10.61□□□□□ -0.71
HLA-B-253ENST00000481849 FAM133AQ8N9E0 248 aa10.61□□□□□ -0.71
HLA-B-253ENST00000481849 KLHDC9Q8NEP7 349 aa10.61□□□□□ -0.71
HLA-B-253ENST00000481849 RILPL2Q969X0 211 aa10.61□□□□□ -0.71
HLA-B-253ENST00000481849 RNPC3Q96LT9 517 aaKnown RBP10.61□□□□□ -0.71
HLA-B-253ENST00000481849 CCPG1Q9ULG6 757 aa10.61□□□□□ -0.71
HLA-B-253ENST00000481849 MYH7P12883 1935 aa10.6□□□□□ -0.71
HLA-B-253ENST00000481849 WIPF1O43516 503 aa10.6□□□□□ -0.71
HLA-B-253ENST00000481849 FGAP02671 866 aa10.6□□□□□ -0.71
HLA-B-253ENST00000481849 GJA9P57773 515 aa10.6□□□□□ -0.71
HLA-B-253ENST00000481849 NHLH1Q02575 133 aa10.6□□□□□ -0.71
HLA-B-253ENST00000481849 TNFAIP2Q03169 654 aa10.6□□□□□ -0.71
HLA-B-253ENST00000481849 HDAC1Q13547 482 aaPredicted RBP10.6□□□□□ -0.71
HLA-B-253ENST00000481849 TMEM31Q5JXX7 168 aa10.6□□□□□ -0.71
HLA-B-253ENST00000481849 ANKRD33Q7Z3H0 272 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms