RNA–Protein interactions for RNA: ENST00000481605.5

TTC3-217, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 1,540 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-217ENST00000481605 ZNF654Q8IZM8 581 aa27.21■■□□□ 1.95
TTC3-217ENST00000481605 PIBF1Q8WXW3 757 aa27.21■■□□□ 1.95
TTC3-217ENST00000481605 MYL10Q9BUA6 226 aa27.21■■□□□ 1.95
TTC3-217ENST00000481605 GRXCR1A8MXD5 290 aa27.2■■□□□ 1.94
TTC3-217ENST00000481605 SLC27A2O14975 620 aa27.2■■□□□ 1.94
TTC3-217ENST00000481605 PRC1O43663 620 aa27.2■■□□□ 1.94
TTC3-217ENST00000481605 OTOP2Q7RTS6 562 aa27.2■■□□□ 1.94
TTC3-217ENST00000481605 SKAP1Q86WV1 359 aa27.2■■□□□ 1.94
TTC3-217ENST00000481605 MYLIPQ8WY64 445 aa27.2■■□□□ 1.94
TTC3-217ENST00000481605 MTIF3Q9H2K0 278 aaKnown RBP27.2■■□□□ 1.94
TTC3-217ENST00000481605 CXXC1Q9P0U4 656 aaPredicted RBP27.2■■□□□ 1.94
TTC3-217ENST00000481605 UNC80Q8N2C7 3258 aa27.19■■□□□ 1.94
TTC3-217ENST00000481605 BAZ2BQ9UIF8 2168 aaKnown RBP27.19■■□□□ 1.94
TTC3-217ENST00000481605 MCM5P33992 734 aa27.19■■□□□ 1.94
TTC3-217ENST00000481605 PTPN11Q06124 597 aaPredicted RBP27.19■■□□□ 1.94
TTC3-217ENST00000481605 PGM5Q15124 567 aa27.19■■□□□ 1.94
TTC3-217ENST00000481605 CENPQQ7L2Z9 268 aaPredicted RBP27.19■■□□□ 1.94
TTC3-217ENST00000481605 RPUSD2Q8IZ73 545 aaKnown RBP27.19■■□□□ 1.94
TTC3-217ENST00000481605 CTCFLQ8NI51 663 aaPredicted RBP27.19■■□□□ 1.94
TTC3-217ENST00000481605 TIFAQ96CG3 184 aa27.19■■□□□ 1.94
TTC3-217ENST00000481605 MAP3K14Q99558 947 aa27.19■■□□□ 1.94
TTC3-217ENST00000481605 MTA3Q9BTC8 594 aa27.19■■□□□ 1.94
TTC3-217ENST00000481605 ANO2Q9NQ90 1003 aa27.19■■□□□ 1.94
TTC3-217ENST00000481605 DDAH1O94760 285 aa27.18■■□□□ 1.94
TTC3-217ENST00000481605 CASTP20810 708 aaKnown RBP27.18■■□□□ 1.94
TTC3-217ENST00000481605 PBX2P40425 430 aa27.18■■□□□ 1.94
TTC3-217ENST00000481605 FCHSD1Q86WN1 690 aa27.18■■□□□ 1.94
TTC3-217ENST00000481605 PBX4Q9BYU1 374 aa27.18■■□□□ 1.94
TTC3-217ENST00000481605 RGS20O76081 388 aa27.17■■□□□ 1.94
TTC3-217ENST00000481605 KIF5BP33176 963 aa27.17■■□□□ 1.94
TTC3-217ENST00000481605 COL9A3Q14050 684 aaPredicted RBP27.17■■□□□ 1.94
TTC3-217ENST00000481605 NECTIN1Q15223 517 aa27.17■■□□□ 1.94
TTC3-217ENST00000481605 DGKDQ16760 1214 aa27.17■■□□□ 1.94
TTC3-217ENST00000481605 BMP2KLQ5H9B9 411 aa27.17■■□□□ 1.94
TTC3-217ENST00000481605 CREB3L3Q68CJ9 461 aa27.17■■□□□ 1.94
TTC3-217ENST00000481605 NFXL1Q6ZNB6 911 aa27.17■■□□□ 1.94
TTC3-217ENST00000481605 VSIG10LQ86VR7 867 aa27.17■■□□□ 1.94
TTC3-217ENST00000481605 IL31RAQ8NI17 732 aa27.17■■□□□ 1.94
TTC3-217ENST00000481605 EMID1Q96A84 441 aaPredicted RBP27.17■■□□□ 1.94
TTC3-217ENST00000481605 LAMC2Q13753 1193 aa27.16■■□□□ 1.94
TTC3-217ENST00000481605 DHX37Q8IY37 1157 aaKnown RBP27.16■■□□□ 1.94
TTC3-217ENST00000481605 TMTC2Q8N394 836 aa27.16■■□□□ 1.94
TTC3-217ENST00000481605 KAT2BQ92831 832 aa27.16■■□□□ 1.94
TTC3-217ENST00000481605 VWCEQ96DN2 955 aa27.16■■□□□ 1.94
TTC3-217ENST00000481605 TMEM87BQ96K49 555 aa27.16■■□□□ 1.94
TTC3-217ENST00000481605 SPZ1Q9BXG8 430 aa27.16■■□□□ 1.94
TTC3-217ENST00000481605 ZNF576Q9H609 170 aa27.16■■□□□ 1.94
TTC3-217ENST00000481605 NOD1Q9Y239 953 aa27.16■■□□□ 1.94
TTC3-217ENST00000481605 CCDC69A6NI79 296 aa27.16■■□□□ 1.94
TTC3-217ENST00000481605 SH2B2O14492 632 aaPredicted RBP27.16■■□□□ 1.94
TTC3-217ENST00000481605 CCND2P30279 289 aa27.16■■□□□ 1.94
TTC3-217ENST00000481605 GRIN2CQ14957 1233 aa27.15■■□□□ 1.94
TTC3-217ENST00000481605 KCNV1Q6PIU1 500 aa27.15■■□□□ 1.94
TTC3-217ENST00000481605 MAFAQ8NHW3 353 aaPredicted RBP27.15■■□□□ 1.94
TTC3-217ENST00000481605 PPTC7Q8NI37 304 aa27.15■■□□□ 1.94
TTC3-217ENST00000481605 RRP36Q96EU6 259 aaKnown RBP27.15■■□□□ 1.94
TTC3-217ENST00000481605 ZFP91Q96JP5 570 aaPredicted RBP27.15■■□□□ 1.94
TTC3-217ENST00000481605 PITPNM1O00562 1244 aa27.14■■□□□ 1.94
TTC3-217ENST00000481605 FOSL2P15408 326 aa27.14■■□□□ 1.94
TTC3-217ENST00000481605 PTGISQ16647 500 aa27.14■■□□□ 1.94
TTC3-217ENST00000481605 DEFB128Q7Z7B8 93 aa27.14■■□□□ 1.94
TTC3-217ENST00000481605 PFKMP08237 780 aa27.13■■□□□ 1.93
TTC3-217ENST00000481605 SMARCA1P28370 1054 aa27.13■■□□□ 1.93
TTC3-217ENST00000481605 SESTD1Q86VW0 696 aa27.13■■□□□ 1.93
TTC3-217ENST00000481605 RETREG2Q8NC44 543 aa27.13■■□□□ 1.93
TTC3-217ENST00000481605 LZTS2Q9BRK4 669 aa27.13■■□□□ 1.93
TTC3-217ENST00000481605 DLL1O00548 723 aa27.12■■□□□ 1.93
TTC3-217ENST00000481605 SORBS3O60504 671 aa27.12■■□□□ 1.93
TTC3-217ENST00000481605 PLEKHA8P1O95397 391 aa27.12■■□□□ 1.93
TTC3-217ENST00000481605 RXRAP19793 462 aa27.12■■□□□ 1.93
TTC3-217ENST00000481605 LIFRP42702 1097 aa27.12■■□□□ 1.93
TTC3-217ENST00000481605 GNAQP50148 359 aa27.12■■□□□ 1.93
TTC3-217ENST00000481605 BFSP2Q13515 415 aa27.12■■□□□ 1.93
TTC3-217ENST00000481605 CELF3Q5SZQ8 465 aaKnown RBP27.12■■□□□ 1.93
TTC3-217ENST00000481605 MYSM1Q5VVJ2 828 aa27.12■■□□□ 1.93
TTC3-217ENST00000481605 GDF6Q6KF10 455 aaPredicted RBP27.12■■□□□ 1.93
TTC3-217ENST00000481605 SEC63Q9UGP8 760 aaKnown RBP27.12■■□□□ 1.93
TTC3-217ENST00000481605 MSRAQ9UJ68 235 aa27.12■■□□□ 1.93
TTC3-217ENST00000481605 SLC4A7Q9Y6M7 1214 aa27.12■■□□□ 1.93
TTC3-217ENST00000481605 ZBBXA8MT70 800 aa27.11■■□□□ 1.93
TTC3-217ENST00000481605 GGPS1O95749 300 aa27.11■■□□□ 1.93
TTC3-217ENST00000481605 IQCF3P0C7M6 154 aa27.11■■□□□ 1.93
TTC3-217ENST00000481605 ZNF286BP0CG31 522 aa27.11■■□□□ 1.93
TTC3-217ENST00000481605 TGFB3P10600 412 aa27.11■■□□□ 1.93
TTC3-217ENST00000481605 SP2Q02086 613 aa27.11■■□□□ 1.93
TTC3-217ENST00000481605 RAB30Q15771 203 aa27.11■■□□□ 1.93
TTC3-217ENST00000481605 SRBD1Q8N5C6 995 aaKnown RBP27.11■■□□□ 1.93
TTC3-217ENST00000481605 SPATA33Q96N06 139 aa27.11■■□□□ 1.93
TTC3-217ENST00000481605 KATNAL1Q9BW62 490 aa27.11■■□□□ 1.93
TTC3-217ENST00000481605 LRRC2Q9BYS8 371 aa27.11■■□□□ 1.93
TTC3-217ENST00000481605 PRUNE2Q8WUY3 3088 aa27.11■■□□□ 1.93
TTC3-217ENST00000481605 UBA1P22314 1058 aaKnown RBP27.11■■□□□ 1.93
TTC3-217ENST00000481605 PSEN2P49810 448 aa27.11■■□□□ 1.93
TTC3-217ENST00000481605 PHF6Q8IWS0 365 aaKnown RBP eCLIP27.11■■□□□ 1.933e-6■■■■■ 28.8
TTC3-217ENST00000481605 CMTR1Q8N1G2 835 aaKnown RBP27.11■■□□□ 1.93
TTC3-217ENST00000481605 GPKOWQ92917 476 aaPredicted RBP eCLIP27.11■■□□□ 1.933e-8■□□□□ 9.8
TTC3-217ENST00000481605 ALG1Q9BT22 464 aa27.11■■□□□ 1.93
TTC3-217ENST00000481605 F2P00734 622 aa27.1■■□□□ 1.93
TTC3-217ENST00000481605 CALM1P0DP23 149 aa27.1■■□□□ 1.93
TTC3-217ENST00000481605 CALM2P0DP24 149 aa27.1■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms