RNA–Protein interactions for RNA: ENST00000480961.1

CTSA-206, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 513 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-206ENST00000480961 ARIH2O95376 493 aa23.32■■□□□ 1.32
CTSA-206ENST00000480961 MRPS9P82933 396 aaKnown RBP23.32■■□□□ 1.32
CTSA-206ENST00000480961 LRRC41Q15345 812 aa23.32■■□□□ 1.32
CTSA-206ENST00000480961 CCDC148Q8NFR7 591 aa23.32■■□□□ 1.32
CTSA-206ENST00000480961 ALG1Q9BT22 464 aa23.32■■□□□ 1.32
CTSA-206ENST00000480961 SH3GLB2Q9NR46 395 aa23.32■■□□□ 1.32
CTSA-206ENST00000480961 SH2B1Q9NRF2 756 aaPredicted RBP23.32■■□□□ 1.32
CTSA-206ENST00000480961 FRMPD4Q14CM0 1322 aa23.32■■□□□ 1.32
CTSA-206ENST00000480961 SYNRGQ9UMZ2 1314 aa23.32■■□□□ 1.32
CTSA-206ENST00000480961 TXNP10599 105 aaKnown RBP23.31■■□□□ 1.32
CTSA-206ENST00000480961 CLK2P49760 499 aaKnown RBP23.31■■□□□ 1.32
CTSA-206ENST00000480961 LY6KQ17RY6 165 aa23.31■■□□□ 1.32
CTSA-206ENST00000480961 ARRDC4Q8NCT1 418 aa23.31■■□□□ 1.32
CTSA-206ENST00000480961 SCFD2Q8WU76 684 aa23.31■■□□□ 1.32
CTSA-206ENST00000480961 TMX3Q96JJ7 454 aa23.31■■□□□ 1.32
CTSA-206ENST00000480961 ANO3Q9BYT9 981 aa23.31■■□□□ 1.32
CTSA-206ENST00000480961 GLT8D2Q9H1C3 349 aa23.31■■□□□ 1.32
CTSA-206ENST00000480961 GNEQ9Y223 722 aaKnown RBP23.31■■□□□ 1.32
CTSA-206ENST00000480961 MCM3APO60318 1980 aa23.31■■□□□ 1.32
CTSA-206ENST00000480961 SORBS3O60504 671 aa23.3■■□□□ 1.32
CTSA-206ENST00000480961 ADAMTS4O75173 837 aa23.3■■□□□ 1.32
CTSA-206ENST00000480961 C6orf222P0C671 652 aaPredicted RBP23.3■■□□□ 1.32
CTSA-206ENST00000480961 GNA11P29992 359 aa23.3■■□□□ 1.32
CTSA-206ENST00000480961 RGS19P49795 217 aa23.3■■□□□ 1.32
CTSA-206ENST00000480961 BEX3Q00994 111 aa23.3■■□□□ 1.32
CTSA-206ENST00000480961 DUSP28Q4G0W2 176 aa23.3■■□□□ 1.32
CTSA-206ENST00000480961 UBE2Q1Q7Z7E8 422 aa23.3■■□□□ 1.32
CTSA-206ENST00000480961 REXO1Q8N1G1 1221 aaKnown RBP23.3■■□□□ 1.32
CTSA-206ENST00000480961 ANKLE1Q8NAG6 615 aa23.3■■□□□ 1.32
CTSA-206ENST00000480961 FOSP01100 380 aaPredicted RBP23.29■■□□□ 1.32
CTSA-206ENST00000480961 TTLL4Q14679 1199 aa23.29■■□□□ 1.32
CTSA-206ENST00000480961 PCNX4Q63HM2 1172 aa23.29■■□□□ 1.32
CTSA-206ENST00000480961 CCDC62Q6P9F0 684 aa23.29■■□□□ 1.32
CTSA-206ENST00000480961 TLK2Q86UE8 772 aa23.29■■□□□ 1.32
CTSA-206ENST00000480961 AP5M1Q9H0R1 490 aa23.29■■□□□ 1.32
CTSA-206ENST00000480961 MRVI1Q9Y6F6 885 aa23.29■■□□□ 1.32
CTSA-206ENST00000480961 RBBP6Q7Z6E9 1792 aaKnown RBP23.28■■□□□ 1.32
CTSA-206ENST00000480961 GJA9P57773 515 aa23.28■■□□□ 1.32
CTSA-206ENST00000480961 NECAB2Q7Z6G3 386 aa23.28■■□□□ 1.32
CTSA-206ENST00000480961 RNF180Q86T96 592 aa23.28■■□□□ 1.32
CTSA-206ENST00000480961 BICD2Q8TD16 824 aa23.28■■□□□ 1.32
CTSA-206ENST00000480961 WASF1Q92558 559 aa23.28■■□□□ 1.32
CTSA-206ENST00000480961 FERMT2Q96AC1 680 aa23.28■■□□□ 1.32
CTSA-206ENST00000480961 PCDHA4Q9UN74 947 aa23.28■■□□□ 1.32
CTSA-206ENST00000480961 KBTBD13C9JR72 458 aa23.27■■□□□ 1.32
CTSA-206ENST00000480961 DNM1LO00429 736 aa23.27■■□□□ 1.32
CTSA-206ENST00000480961 CTAGE5O15320 804 aa23.27■■□□□ 1.32
CTSA-206ENST00000480961 AP3B2Q13367 1082 aa23.27■■□□□ 1.32
CTSA-206ENST00000480961 NPY5RQ15761 445 aa23.27■■□□□ 1.32
CTSA-206ENST00000480961 GNASQ5JWF2 1037 aa23.27■■□□□ 1.32
CTSA-206ENST00000480961 BLIDQ8IZY5 108 aa23.27■■□□□ 1.32
CTSA-206ENST00000480961 KLHDC9Q8NEP7 349 aa23.27■■□□□ 1.32
CTSA-206ENST00000480961 OR6J1Q8NGC5 347 aa23.27■■□□□ 1.32
CTSA-206ENST00000480961 LLPHQ9BRT6 129 aaKnown RBP23.27■■□□□ 1.32
CTSA-206ENST00000480961 PHF20Q9BVI0 1012 aa23.27■■□□□ 1.32
CTSA-206ENST00000480961 SENP6Q9GZR1 1112 aaPredicted RBP23.27■■□□□ 1.32
CTSA-206ENST00000480961 UPF3AQ9H1J1 476 aaKnown RBP23.27■■□□□ 1.32
CTSA-206ENST00000480961 C11orf49Q9H6J7 331 aa23.27■■□□□ 1.32
CTSA-206ENST00000480961 EHMT1Q9H9B1 1298 aa23.27■■□□□ 1.32
CTSA-206ENST00000480961 SPC25Q9HBM1 224 aa23.27■■□□□ 1.32
CTSA-206ENST00000480961 DDX41Q9UJV9 622 aaKnown RBP23.27■■□□□ 1.32
CTSA-206ENST00000480961 CAPN2P17655 700 aa23.26■■□□□ 1.31
CTSA-206ENST00000480961 ITGB5P18084 799 aa23.26■■□□□ 1.31
CTSA-206ENST00000480961 MCM2P49736 904 aa23.26■■□□□ 1.31
CTSA-206ENST00000480961 SP2Q02086 613 aa23.26■■□□□ 1.31
CTSA-206ENST00000480961 KCNA10Q16322 511 aa23.26■■□□□ 1.31
CTSA-206ENST00000480961 XRRA1Q6P2D8 792 aa23.26■■□□□ 1.31
CTSA-206ENST00000480961 INPP4AQ96PE3 977 aaPredicted RBP23.26■■□□□ 1.31
CTSA-206ENST00000480961 BCAS3Q9H6U6 928 aa23.26■■□□□ 1.31
CTSA-206ENST00000480961 LRRC37A2A6NM11 1700 aa23.25■■□□□ 1.31
CTSA-206ENST00000480961 XBP1P17861 261 aa23.25■■□□□ 1.31
CTSA-206ENST00000480961 SREBF1P36956 1147 aa23.25■■□□□ 1.31
CTSA-206ENST00000480961 ARHGAP4P98171 946 aa23.25■■□□□ 1.31
CTSA-206ENST00000480961 GUCY1B3Q02153 619 aa23.25■■□□□ 1.31
CTSA-206ENST00000480961 SEMA3FQ13275 785 aa23.25■■□□□ 1.31
CTSA-206ENST00000480961 FSCN1Q16658 493 aaKnown RBP23.25■■□□□ 1.31
CTSA-206ENST00000480961 TEX2Q8IWB9 1127 aa23.25■■□□□ 1.31
CTSA-206ENST00000480961 IL27Q8NEV9 243 aa23.25■■□□□ 1.31
CTSA-206ENST00000480961 CYP2W1Q8TAV3 490 aa23.25■■□□□ 1.31
CTSA-206ENST00000480961 OXER1Q8TDS5 423 aa23.25■■□□□ 1.31
CTSA-206ENST00000480961 DNAH12Q6ZR08 3092 aa23.24■■□□□ 1.31
CTSA-206ENST00000480961 SPATA31C2B4DYI2 1134 aa23.24■■□□□ 1.31
CTSA-206ENST00000480961 COL6A1P12109 1028 aa23.24■■□□□ 1.31
CTSA-206ENST00000480961 ATN1P54259 1190 aaPredicted RBP23.24■■□□□ 1.31
CTSA-206ENST00000480961 MLLT1Q03111 559 aaPredicted RBP23.24■■□□□ 1.31
CTSA-206ENST00000480961 GNPTABQ3T906 1256 aa23.24■■□□□ 1.31
CTSA-206ENST00000480961 CCSAPQ6IQ19 270 aaPredicted RBP23.24■■□□□ 1.31
CTSA-206ENST00000480961 PKD2L1Q9P0L9 805 aa23.24■■□□□ 1.31
CTSA-206ENST00000480961 UBIAD1Q9Y5Z9 338 aa23.24■■□□□ 1.31
CTSA-206ENST00000480961 NKRFO15226 690 aaKnown RBP eCLIP23.23■■□□□ 1.31
CTSA-206ENST00000480961 STAM2O75886 525 aa23.23■■□□□ 1.31
CTSA-206ENST00000480961 GH1P01241 217 aa23.23■■□□□ 1.31
CTSA-206ENST00000480961 ZNF76P36508 570 aa23.23■■□□□ 1.31
CTSA-206ENST00000480961 ACLYP53396 1101 aa23.23■■□□□ 1.31
CTSA-206ENST00000480961 ARHGAP1Q07960 439 aa23.23■■□□□ 1.31
CTSA-206ENST00000480961 NLRX1Q86UT6 975 aa23.23■■□□□ 1.31
CTSA-206ENST00000480961 DAGLBQ8NCG7 672 aa23.23■■□□□ 1.31
CTSA-206ENST00000480961 UIMC1Q96RL1 719 aa23.23■■□□□ 1.31
CTSA-206ENST00000480961 Q9Y3F1 56 aa23.23■■□□□ 1.31
CTSA-206ENST00000480961 M0R2N6 131 aa23.22■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms