RNA–Protein interactions for RNA: ENST00000480828.5

UBE2F-221, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 2

Gene UBE2F, Length 802 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-221ENST00000480828 GRB10Q13322 594 aa4.78□□□□□ -1.64
UBE2F-221ENST00000480828 IKZF1Q13422 519 aa4.78□□□□□ -1.64
UBE2F-221ENST00000480828 MLC1Q15049 377 aa4.78□□□□□ -1.64
UBE2F-221ENST00000480828 FAM102BQ5T8I3 360 aa4.78□□□□□ -1.64
UBE2F-221ENST00000480828 PPP4R4Q6NUP7 873 aa4.78□□□□□ -1.64
UBE2F-221ENST00000480828 SLC4A10Q6U841 1118 aa4.78□□□□□ -1.64
UBE2F-221ENST00000480828 MTDHQ86UE4 582 aaKnown RBP4.78□□□□□ -1.64
UBE2F-221ENST00000480828 IGSF22Q8N9C0 903 aa4.78□□□□□ -1.64
UBE2F-221ENST00000480828 KREMEN2Q8NCW0 462 aa4.78□□□□□ -1.64
UBE2F-221ENST00000480828 RNF141Q8WVD5 230 aa4.78□□□□□ -1.64
UBE2F-221ENST00000480828 JPH3Q8WXH2 748 aaPredicted RBP4.78□□□□□ -1.64
UBE2F-221ENST00000480828 CCDC140Q96MF4 163 aa4.78□□□□□ -1.64
UBE2F-221ENST00000480828 HSPA12BQ96MM6 686 aa4.78□□□□□ -1.64
UBE2F-221ENST00000480828 GPR101Q96P66 508 aaPredicted RBP4.78□□□□□ -1.64
UBE2F-221ENST00000480828 MPHOSPH6Q99547 160 aaKnown RBP4.78□□□□□ -1.64
UBE2F-221ENST00000480828 DSCC1Q9BVC3 393 aa4.78□□□□□ -1.64
UBE2F-221ENST00000480828 PHF20Q9BVI0 1012 aa4.78□□□□□ -1.64
UBE2F-221ENST00000480828 ASPNQ9BXN1 380 aa4.78□□□□□ -1.64
UBE2F-221ENST00000480828 RHOBTB2Q9BYZ6 727 aa4.78□□□□□ -1.64
UBE2F-221ENST00000480828 ATP13A1Q9HD20 1204 aa4.78□□□□□ -1.64
UBE2F-221ENST00000480828 VTA1Q9NP79 307 aa4.78□□□□□ -1.64
UBE2F-221ENST00000480828 CYP26B1Q9NR63 512 aa4.78□□□□□ -1.64
UBE2F-221ENST00000480828 IP6K2Q9UHH9 426 aa4.78□□□□□ -1.64
UBE2F-221ENST00000480828 APOBEC2Q9Y235 224 aaKnown RBP4.78□□□□□ -1.64
UBE2F-221ENST00000480828 DIS3Q9Y2L1 958 aaKnown RBP4.78□□□□□ -1.64
UBE2F-221ENST00000480828 COQ6Q9Y2Z9 468 aa4.78□□□□□ -1.64
UBE2F-221ENST00000480828 GNAT3A8MTJ3 354 aa4.77□□□□□ -1.65
UBE2F-221ENST00000480828 B4E1Z4 1266 aa4.77□□□□□ -1.65
UBE2F-221ENST00000480828 CBX4O00257 560 aa4.77□□□□□ -1.65
UBE2F-221ENST00000480828 AQP7O14520 342 aa4.77□□□□□ -1.65
UBE2F-221ENST00000480828 PLIN1O60240 522 aa4.77□□□□□ -1.65
UBE2F-221ENST00000480828 ZEB2O60315 1214 aa4.77□□□□□ -1.65
UBE2F-221ENST00000480828 FBXO21O94952 628 aa4.77□□□□□ -1.65
UBE2F-221ENST00000480828 MYL1P05976 194 aa4.77□□□□□ -1.65
UBE2F-221ENST00000480828 ZSCAN20P17040 1043 aaPredicted RBP4.77□□□□□ -1.65
UBE2F-221ENST00000480828 PDE6BP35913 854 aa4.77□□□□□ -1.65
UBE2F-221ENST00000480828 IARSP41252 1262 aaKnown RBP4.77□□□□□ -1.65
UBE2F-221ENST00000480828 TCIRG1Q13488 830 aa4.77□□□□□ -1.65
UBE2F-221ENST00000480828 ZNF124Q15973 351 aa4.77□□□□□ -1.65
UBE2F-221ENST00000480828 PTPN21Q16825 1174 aa4.77□□□□□ -1.65
UBE2F-221ENST00000480828 SFRP5Q5T4F7 317 aa4.77□□□□□ -1.65
UBE2F-221ENST00000480828 IQSEC1Q6DN90 963 aa4.77□□□□□ -1.65
UBE2F-221ENST00000480828 KSR2Q6VAB6 950 aa4.77□□□□□ -1.65
UBE2F-221ENST00000480828 DDX53Q86TM3 631 aaKnown RBP4.77□□□□□ -1.65
UBE2F-221ENST00000480828 PPIL6Q8IXY8 311 aa4.77□□□□□ -1.65
UBE2F-221ENST00000480828 CBARPQ8N350 705 aaPredicted RBP4.77□□□□□ -1.65
UBE2F-221ENST00000480828 MFSD4AQ8N468 514 aa4.77□□□□□ -1.65
UBE2F-221ENST00000480828 SMC1BQ8NDV3 1235 aa4.77□□□□□ -1.65
UBE2F-221ENST00000480828 DCAF4Q8WV16 495 aa4.77□□□□□ -1.65
UBE2F-221ENST00000480828 SLC39A13Q96H72 371 aa4.77□□□□□ -1.65
UBE2F-221ENST00000480828 KRTAP4-7Q9BYR0 210 aa4.77□□□□□ -1.65
UBE2F-221ENST00000480828 CARS2Q9HA77 564 aaKnown RBP4.77□□□□□ -1.65
UBE2F-221ENST00000480828 GPRC5CQ9NQ84 441 aa4.77□□□□□ -1.65
UBE2F-221ENST00000480828 LMCD1Q9NZU5 365 aa4.77□□□□□ -1.65
UBE2F-221ENST00000480828 E2F8A0AVK6 867 aa4.76□□□□□ -1.65
UBE2F-221ENST00000480828 ARNTLO00327 626 aa4.76□□□□□ -1.65
UBE2F-221ENST00000480828 MSCO60682 206 aa4.76□□□□□ -1.65
UBE2F-221ENST00000480828 EIF3JO75822 258 aaKnown RBP4.76□□□□□ -1.65
UBE2F-221ENST00000480828 ABLIM3O94929 683 aa4.76□□□□□ -1.65
UBE2F-221ENST00000480828 FKBP9O95302 570 aa4.76□□□□□ -1.65
UBE2F-221ENST00000480828 PRAMEF1O95521 474 aa4.76□□□□□ -1.65
UBE2F-221ENST00000480828 MT-CO1P00395 513 aa4.76□□□□□ -1.65
UBE2F-221ENST00000480828 CPP00450 1065 aa4.76□□□□□ -1.65
UBE2F-221ENST00000480828 F2P00734 622 aa4.76□□□□□ -1.65
UBE2F-221ENST00000480828 THBDP07204 575 aa4.76□□□□□ -1.65
UBE2F-221ENST00000480828 CD3EP07766 207 aa4.76□□□□□ -1.65
UBE2F-221ENST00000480828 SRGAP2CP0DJJ0 459 aa4.76□□□□□ -1.65
UBE2F-221ENST00000480828 ETV3P41162 512 aa4.76□□□□□ -1.65
UBE2F-221ENST00000480828 DSG1Q02413 1049 aa4.76□□□□□ -1.65
UBE2F-221ENST00000480828 SART3Q15020 963 aaKnown RBP4.76□□□□□ -1.65
UBE2F-221ENST00000480828 NXNQ6DKJ4 435 aa4.76□□□□□ -1.65
UBE2F-221ENST00000480828 CRTC3Q6UUV7 619 aa4.76□□□□□ -1.65
UBE2F-221ENST00000480828 FKBP9P1Q75LS8 142 aa4.76□□□□□ -1.65
UBE2F-221ENST00000480828 ZSWIM9Q86XI8 627 aa4.76□□□□□ -1.65
UBE2F-221ENST00000480828 TCEAL8Q8IYN2 117 aa4.76□□□□□ -1.65
UBE2F-221ENST00000480828 MAGEB6Q8N7X4 407 aa4.76□□□□□ -1.65
UBE2F-221ENST00000480828 FRS2Q8WU20 508 aa4.76□□□□□ -1.65
UBE2F-221ENST00000480828 THG1LQ9NWX6 298 aaKnown RBP4.76□□□□□ -1.65
UBE2F-221ENST00000480828 TMEFF2Q9UIK5 374 aaPredicted RBP4.76□□□□□ -1.65
UBE2F-221ENST00000480828 LUC7L2Q9Y383 392 aaKnown RBP4.76□□□□□ -1.65
UBE2F-221ENST00000480828 SF3B6Q9Y3B4 125 aaKnown RBP4.76□□□□□ -1.65
UBE2F-221ENST00000480828 VSTM5A8MXK1 200 aa4.75□□□□□ -1.65
UBE2F-221ENST00000480828 TRAF5O00463 557 aa4.75□□□□□ -1.65
UBE2F-221ENST00000480828 FARP2O94887 1054 aaPredicted RBP4.75□□□□□ -1.65
UBE2F-221ENST00000480828 MYBL2P10244 700 aa4.75□□□□□ -1.65
UBE2F-221ENST00000480828 LCP1P13796 627 aa4.75□□□□□ -1.65
UBE2F-221ENST00000480828 IFNGR1P15260 489 aa4.75□□□□□ -1.65
UBE2F-221ENST00000480828 CTSKP43235 329 aa4.75□□□□□ -1.65
UBE2F-221ENST00000480828 TNK2Q07912 1038 aa4.75□□□□□ -1.65
UBE2F-221ENST00000480828 ATP13A4Q4VNC1 1196 aa4.75□□□□□ -1.65
UBE2F-221ENST00000480828 TMED8Q6PL24 325 aaPredicted RBP4.75□□□□□ -1.65
UBE2F-221ENST00000480828 HDGFL2Q7Z4V5 671 aaPredicted RBP4.75□□□□□ -1.65
UBE2F-221ENST00000480828 ANKLE2Q86XL3 938 aa4.75□□□□□ -1.65
UBE2F-221ENST00000480828 CCDC103Q8IW40 242 aa4.75□□□□□ -1.65
UBE2F-221ENST00000480828 ZC3H7AQ8IWR0 971 aaKnown RBP4.75□□□□□ -1.65
UBE2F-221ENST00000480828 TPH2Q8IWU9 490 aa4.75□□□□□ -1.65
UBE2F-221ENST00000480828 NPLOC4Q8TAT6 608 aa4.75□□□□□ -1.65
UBE2F-221ENST00000480828 CHTF18Q8WVB6 975 aa4.75□□□□□ -1.65
UBE2F-221ENST00000480828 COPS5Q92905 334 aa4.75□□□□□ -1.65
UBE2F-221ENST00000480828 Q96M66 194 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms