RNA–Protein interactions for RNA: ENST00000480539.1

ABCF3-213, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-213ENST00000480539 EHMT1Q9H9B1 1298 aa17.34■□□□□ 0.37
ABCF3-213ENST00000480539 SYNRGQ9UMZ2 1314 aa17.34■□□□□ 0.37
ABCF3-213ENST00000480539 FARP2O94887 1054 aaPredicted RBP17.33■□□□□ 0.36
ABCF3-213ENST00000480539 ARIH2O95376 493 aa17.33■□□□□ 0.36
ABCF3-213ENST00000480539 SMPD1P17405 629 aa17.33■□□□□ 0.36
ABCF3-213ENST00000480539 IRX5P78411 483 aaPredicted RBP17.33■□□□□ 0.36
ABCF3-213ENST00000480539 MRPS9P82933 396 aaKnown RBP17.33■□□□□ 0.36
ABCF3-213ENST00000480539 PCNX4Q63HM2 1172 aa17.33■□□□□ 0.36
ABCF3-213ENST00000480539 TLK2Q86UE8 772 aa17.33■□□□□ 0.36
ABCF3-213ENST00000480539 BICD2Q8TD16 824 aa17.33■□□□□ 0.36
ABCF3-213ENST00000480539 LLPHQ9BRT6 129 aaKnown RBP17.33■□□□□ 0.36
ABCF3-213ENST00000480539 WDR11Q9BZH6 1224 aa17.33■□□□□ 0.36
ABCF3-213ENST00000480539 RBM47A0AV96 593 aaKnown RBP17.32■□□□□ 0.36
ABCF3-213ENST00000480539 MYADML2A6NDP7 307 aa17.32■□□□□ 0.36
ABCF3-213ENST00000480539 EIF3JO75822 258 aaKnown RBP17.32■□□□□ 0.36
ABCF3-213ENST00000480539 RGS20O76081 388 aa17.32■□□□□ 0.36
ABCF3-213ENST00000480539 XBP1P17861 261 aa17.32■□□□□ 0.36
ABCF3-213ENST00000480539 NPY5RQ15761 445 aa17.32■□□□□ 0.36
ABCF3-213ENST00000480539 VSIG10LQ86VR7 867 aa17.32■□□□□ 0.36
ABCF3-213ENST00000480539 TEX2Q8IWB9 1127 aa17.32■□□□□ 0.36
ABCF3-213ENST00000480539 SCFD2Q8WU76 684 aa17.32■□□□□ 0.36
ABCF3-213ENST00000480539 PHF20Q9BVI0 1012 aa17.32■□□□□ 0.36
ABCF3-213ENST00000480539 RTEL1Q9NZ71 1219 aa17.32■□□□□ 0.36
ABCF3-213ENST00000480539 PCDHA4Q9UN74 947 aa17.32■□□□□ 0.36
ABCF3-213ENST00000480539 MRVI1Q9Y6F6 885 aa17.32■□□□□ 0.36
ABCF3-213ENST00000480539 KIAA0100Q14667 2235 aaKnown RBP17.32■□□□□ 0.36
ABCF3-213ENST00000480539 KIAA1217Q5T5P2 1943 aa17.31■□□□□ 0.36
ABCF3-213ENST00000480539 ADAMTS4O75173 837 aa17.31■□□□□ 0.36
ABCF3-213ENST00000480539 DUSP11O75319 330 aaKnown RBP17.31■□□□□ 0.36
ABCF3-213ENST00000480539 FOSP01100 380 aaPredicted RBP17.31■□□□□ 0.36
ABCF3-213ENST00000480539 TXNP10599 105 aaKnown RBP17.31■□□□□ 0.36
ABCF3-213ENST00000480539 TTLL4Q14679 1199 aa17.31■□□□□ 0.36
ABCF3-213ENST00000480539 LRRC41Q15345 812 aa17.31■□□□□ 0.36
ABCF3-213ENST00000480539 LY6KQ17RY6 165 aa17.31■□□□□ 0.36
ABCF3-213ENST00000480539 IQSEC1Q6DN90 963 aa17.31■□□□□ 0.36
ABCF3-213ENST00000480539 BLIDQ8IZY5 108 aa17.31■□□□□ 0.36
ABCF3-213ENST00000480539 DAGLBQ8NCG7 672 aa17.31■□□□□ 0.36
ABCF3-213ENST00000480539 COPS5Q92905 334 aa17.31■□□□□ 0.36
ABCF3-213ENST00000480539 GNEQ9Y223 722 aaKnown RBP17.31■□□□□ 0.36
ABCF3-213ENST00000480539 KBTBD13C9JR72 458 aa17.3■□□□□ 0.36
ABCF3-213ENST00000480539 SORBS3O60504 671 aa17.3■□□□□ 0.36
ABCF3-213ENST00000480539 C6orf222P0C671 652 aaPredicted RBP17.3■□□□□ 0.36
ABCF3-213ENST00000480539 SREBF1P36956 1147 aa17.3■□□□□ 0.36
ABCF3-213ENST00000480539 MNX1P50219 401 aaPredicted RBP17.3■□□□□ 0.36
ABCF3-213ENST00000480539 HMGN5P82970 282 aaKnown RBP17.3■□□□□ 0.36
ABCF3-213ENST00000480539 DUSP28Q4G0W2 176 aa17.3■□□□□ 0.36
ABCF3-213ENST00000480539 ANKLE1Q8NAG6 615 aa17.3■□□□□ 0.36
ABCF3-213ENST00000480539 INPP4AQ96PE3 977 aaPredicted RBP17.3■□□□□ 0.36
ABCF3-213ENST00000480539 UPF3AQ9H1J1 476 aaKnown RBP17.3■□□□□ 0.36
ABCF3-213ENST00000480539 ARHGAP4P98171 946 aa17.29■□□□□ 0.36
ABCF3-213ENST00000480539 BEX3Q00994 111 aa17.29■□□□□ 0.36
ABCF3-213ENST00000480539 GUCY1B3Q02153 619 aa17.29■□□□□ 0.36
ABCF3-213ENST00000480539 TRIM29Q14134 588 aa17.29■□□□□ 0.36
ABCF3-213ENST00000480539 GNPTABQ3T906 1256 aa17.29■□□□□ 0.36
ABCF3-213ENST00000480539 IFFO2Q5TF58 517 aa17.29■□□□□ 0.36
ABCF3-213ENST00000480539 XRRA1Q6P2D8 792 aa17.29■□□□□ 0.36
ABCF3-213ENST00000480539 FAM177A1Q8N128 213 aaPredicted RBP17.29■□□□□ 0.36
ABCF3-213ENST00000480539 FAM184AQ8NB25 1140 aa17.29■□□□□ 0.36
ABCF3-213ENST00000480539 OR6J1Q8NGC5 347 aa17.29■□□□□ 0.36
ABCF3-213ENST00000480539 OXER1Q8TDS5 423 aa17.29■□□□□ 0.36
ABCF3-213ENST00000480539 PAWRQ96IZ0 340 aaKnown RBP17.29■□□□□ 0.36
ABCF3-213ENST00000480539 AP5M1Q9H0R1 490 aa17.29■□□□□ 0.36
ABCF3-213ENST00000480539 SPC25Q9HBM1 224 aa17.29■□□□□ 0.36
ABCF3-213ENST00000480539 M0R2N6 131 aa17.28■□□□□ 0.36
ABCF3-213ENST00000480539 DNM1LO00429 736 aa17.28■□□□□ 0.36
ABCF3-213ENST00000480539 DYNC1LI2O43237 492 aaPredicted RBP17.28■□□□□ 0.36
ABCF3-213ENST00000480539 STAM2O75886 525 aa17.28■□□□□ 0.36
ABCF3-213ENST00000480539 UBA1P22314 1058 aaKnown RBP17.28■□□□□ 0.36
ABCF3-213ENST00000480539 GJA9P57773 515 aa17.28■□□□□ 0.36
ABCF3-213ENST00000480539 SEMA3FQ13275 785 aa17.28■□□□□ 0.36
ABCF3-213ENST00000480539 KRT40Q6A162 431 aa17.28■□□□□ 0.36
ABCF3-213ENST00000480539 MCTP2Q6DN12 878 aa17.28■□□□□ 0.36
ABCF3-213ENST00000480539 GALNT17Q6IS24 598 aa17.28■□□□□ 0.36
ABCF3-213ENST00000480539 CCDC62Q6P9F0 684 aa17.28■□□□□ 0.36
ABCF3-213ENST00000480539 UBE2Q1Q7Z7E8 422 aa17.28■□□□□ 0.36
ABCF3-213ENST00000480539 RNF180Q86T96 592 aa17.28■□□□□ 0.36
ABCF3-213ENST00000480539 ARRDC4Q8NCT1 418 aa17.28■□□□□ 0.36
ABCF3-213ENST00000480539 C8orf76Q96K31 380 aa17.28■□□□□ 0.36
ABCF3-213ENST00000480539 K7ELQ4 463 aaPredicted RBP17.27■□□□□ 0.36
ABCF3-213ENST00000480539 NKRFO15226 690 aaKnown RBP eCLIP17.27■□□□□ 0.36
ABCF3-213ENST00000480539 CTAGE5O15320 804 aa17.27■□□□□ 0.36
ABCF3-213ENST00000480539 FIBPO43427 364 aa17.27■□□□□ 0.36
ABCF3-213ENST00000480539 MMP1P03956 469 aa17.27■□□□□ 0.36
ABCF3-213ENST00000480539 ITGB5P18084 799 aa17.27■□□□□ 0.36
ABCF3-213ENST00000480539 GJB2P29033 226 aa17.27■□□□□ 0.36
ABCF3-213ENST00000480539 KRT2P35908 639 aa17.27■□□□□ 0.36
ABCF3-213ENST00000480539 NR5A1Q13285 461 aa17.27■□□□□ 0.36
ABCF3-213ENST00000480539 NLRX1Q86UT6 975 aa17.27■□□□□ 0.36
ABCF3-213ENST00000480539 TBCKQ8TEA7 893 aa17.27■□□□□ 0.36
ABCF3-213ENST00000480539 C11orf49Q9H6J7 331 aa17.27■□□□□ 0.36
ABCF3-213ENST00000480539 BRMS1Q9HCU9 246 aa17.27■□□□□ 0.36
ABCF3-213ENST00000480539 PKD2L1Q9P0L9 805 aa17.27■□□□□ 0.36
ABCF3-213ENST00000480539 DDX41Q9UJV9 622 aaKnown RBP17.27■□□□□ 0.36
ABCF3-213ENST00000480539 UBIAD1Q9Y5Z9 338 aa17.27■□□□□ 0.36
ABCF3-213ENST00000480539 MYH7BA7E2Y1 1941 aa17.26■□□□□ 0.35
ABCF3-213ENST00000480539 GGPS1O95749 300 aa17.26■□□□□ 0.35
ABCF3-213ENST00000480539 GH1P01241 217 aa17.26■□□□□ 0.35
ABCF3-213ENST00000480539 CST5P28325 142 aaPredicted RBP17.26■□□□□ 0.35
ABCF3-213ENST00000480539 ZNF76P36508 570 aa17.26■□□□□ 0.35
ABCF3-213ENST00000480539 SP2Q02086 613 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms