RNA–Protein interactions for RNA: ENST00000479554.5

ATG4B-218, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 556 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-218ENST00000479554 CASC1Q6TDU7 716 aa16.61■□□□□ 0.25
ATG4B-218ENST00000479554 RPUSD2Q8IZ73 545 aaKnown RBP16.61■□□□□ 0.25
ATG4B-218ENST00000479554 IGDCC4Q8TDY8 1250 aa16.61■□□□□ 0.25
ATG4B-218ENST00000479554 PPP1R13LQ8WUF5 828 aa16.61■□□□□ 0.25
ATG4B-218ENST00000479554 SCLYQ96I15 445 aa16.61■□□□□ 0.25
ATG4B-218ENST00000479554 PDCD2LQ9BRP1 358 aa16.61■□□□□ 0.25
ATG4B-218ENST00000479554 PRUNE2Q8WUY3 3088 aa16.61■□□□□ 0.25
ATG4B-218ENST00000479554 PNMA6FA0A0J9YX94 578 aa16.6■□□□□ 0.25
ATG4B-218ENST00000479554 GCOM1H8Y6P7 765 aaPredicted RBP16.6■□□□□ 0.25
ATG4B-218ENST00000479554 POLR2MP0CAP2 368 aa16.6■□□□□ 0.25
ATG4B-218ENST00000479554 MYCLP12524 364 aaPredicted RBP16.6■□□□□ 0.25
ATG4B-218ENST00000479554 FOSL2P15408 326 aa16.6■□□□□ 0.25
ATG4B-218ENST00000479554 OTOP2Q7RTS6 562 aa16.6■□□□□ 0.25
ATG4B-218ENST00000479554 ZNF654Q8IZM8 581 aa16.6■□□□□ 0.25
ATG4B-218ENST00000479554 ESYT1Q9BSJ8 1104 aa16.6■□□□□ 0.25
ATG4B-218ENST00000479554 PBX4Q9BYU1 374 aa16.6■□□□□ 0.25
ATG4B-218ENST00000479554 LSG1Q9H089 658 aaKnown RBP16.6■□□□□ 0.25
ATG4B-218ENST00000479554 LY9Q9HBG7 655 aa16.6■□□□□ 0.25
ATG4B-218ENST00000479554 CXXC1Q9P0U4 656 aaPredicted RBP16.6■□□□□ 0.25
ATG4B-218ENST00000479554 DDX41Q9UJV9 622 aaKnown RBP16.6■□□□□ 0.25
ATG4B-218ENST00000479554 NOD1Q9Y239 953 aa16.6■□□□□ 0.25
ATG4B-218ENST00000479554 GRXCR1A8MXD5 290 aa16.59■□□□□ 0.25
ATG4B-218ENST00000479554 PRC1O43663 620 aa16.59■□□□□ 0.25
ATG4B-218ENST00000479554 DDAH1O94760 285 aa16.59■□□□□ 0.25
ATG4B-218ENST00000479554 CASTP20810 708 aaKnown RBP16.59■□□□□ 0.25
ATG4B-218ENST00000479554 PGM5Q15124 567 aa16.59■□□□□ 0.25
ATG4B-218ENST00000479554 DGKDQ16760 1214 aa16.59■□□□□ 0.25
ATG4B-218ENST00000479554 MAFAQ8NHW3 353 aaPredicted RBP16.59■□□□□ 0.25
ATG4B-218ENST00000479554 CTCFLQ8NI51 663 aaPredicted RBP16.59■□□□□ 0.25
ATG4B-218ENST00000479554 PIBF1Q8WXW3 757 aa16.59■□□□□ 0.25
ATG4B-218ENST00000479554 EMID1Q96A84 441 aaPredicted RBP16.59■□□□□ 0.25
ATG4B-218ENST00000479554 MTA3Q9BTC8 594 aa16.59■□□□□ 0.25
ATG4B-218ENST00000479554 ZNF576Q9H609 170 aa16.59■□□□□ 0.25
ATG4B-218ENST00000479554 TANC1Q9C0D5 1861 aa16.59■□□□□ 0.25
ATG4B-218ENST00000479554 ZBBXA8MT70 800 aa16.58■□□□□ 0.24
ATG4B-218ENST00000479554 DLL1O00548 723 aa16.58■□□□□ 0.24
ATG4B-218ENST00000479554 SLC27A2O14975 620 aa16.58■□□□□ 0.24
ATG4B-218ENST00000479554 PFKMP08237 780 aa16.58■□□□□ 0.24
ATG4B-218ENST00000479554 CCND2P30279 289 aa16.58■□□□□ 0.24
ATG4B-218ENST00000479554 KIF5BP33176 963 aa16.58■□□□□ 0.24
ATG4B-218ENST00000479554 MCM5P33992 734 aa16.58■□□□□ 0.24
ATG4B-218ENST00000479554 PBX2P40425 430 aa16.58■□□□□ 0.24
ATG4B-218ENST00000479554 BFSP2Q13515 415 aa16.58■□□□□ 0.24
ATG4B-218ENST00000479554 LAMC2Q13753 1193 aa16.58■□□□□ 0.24
ATG4B-218ENST00000479554 RAB30Q15771 203 aa16.58■□□□□ 0.24
ATG4B-218ENST00000479554 NFXL1Q6ZNB6 911 aa16.58■□□□□ 0.24
ATG4B-218ENST00000479554 FCHSD1Q86WN1 690 aa16.58■□□□□ 0.24
ATG4B-218ENST00000479554 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.58■□□□□ 0.24
ATG4B-218ENST00000479554 DHX37Q8IY37 1157 aaKnown RBP16.58■□□□□ 0.24
ATG4B-218ENST00000479554 IL31RAQ8NI17 732 aa16.58■□□□□ 0.24
ATG4B-218ENST00000479554 MAP3K14Q99558 947 aa16.58■□□□□ 0.24
ATG4B-218ENST00000479554 MYL10Q9BUA6 226 aa16.58■□□□□ 0.24
ATG4B-218ENST00000479554 ANO2Q9NQ90 1003 aa16.58■□□□□ 0.24
ATG4B-218ENST00000479554 CCDC69A6NI79 296 aa16.57■□□□□ 0.24
ATG4B-218ENST00000479554 PITPNM1O00562 1244 aa16.57■□□□□ 0.24
ATG4B-218ENST00000479554 GRIN2CQ14957 1233 aa16.57■□□□□ 0.24
ATG4B-218ENST00000479554 CREB3L3Q68CJ9 461 aa16.57■□□□□ 0.24
ATG4B-218ENST00000479554 KCNV1Q6PIU1 500 aa16.57■□□□□ 0.24
ATG4B-218ENST00000479554 DEFB128Q7Z7B8 93 aa16.57■□□□□ 0.24
ATG4B-218ENST00000479554 VSIG10LQ86VR7 867 aa16.57■□□□□ 0.24
ATG4B-218ENST00000479554 SESTD1Q86VW0 696 aa16.57■□□□□ 0.24
ATG4B-218ENST00000479554 RETREG2Q8NC44 543 aa16.57■□□□□ 0.24
ATG4B-218ENST00000479554 PPTC7Q8NI37 304 aa16.57■□□□□ 0.24
ATG4B-218ENST00000479554 KAT2BQ92831 832 aa16.57■□□□□ 0.24
ATG4B-218ENST00000479554 RRP36Q96EU6 259 aaKnown RBP16.57■□□□□ 0.24
ATG4B-218ENST00000479554 TMEM87BQ96K49 555 aa16.57■□□□□ 0.24
ATG4B-218ENST00000479554 KATNAL1Q9BW62 490 aa16.57■□□□□ 0.24
ATG4B-218ENST00000479554 SPZ1Q9BXG8 430 aa16.57■□□□□ 0.24
ATG4B-218ENST00000479554 MSRAQ9UJ68 235 aa16.57■□□□□ 0.24
ATG4B-218ENST00000479554 SLC4A7Q9Y6M7 1214 aa16.57■□□□□ 0.24
ATG4B-218ENST00000479554 BAZ2BQ9UIF8 2168 aaKnown RBP16.56■□□□□ 0.24
ATG4B-218ENST00000479554 SH2B2O14492 632 aaPredicted RBP16.56■□□□□ 0.24
ATG4B-218ENST00000479554 RGS20O76081 388 aa16.56■□□□□ 0.24
ATG4B-218ENST00000479554 RFC2P35250 354 aa16.56■□□□□ 0.24
ATG4B-218ENST00000479554 GNAQP50148 359 aa16.56■□□□□ 0.24
ATG4B-218ENST00000479554 PTGISQ16647 500 aa16.56■□□□□ 0.24
ATG4B-218ENST00000479554 BMP2KLQ5H9B9 411 aa16.56■□□□□ 0.24
ATG4B-218ENST00000479554 CCDC155Q8N6L0 562 aa16.56■□□□□ 0.24
ATG4B-218ENST00000479554 VWCEQ96DN2 955 aa16.56■□□□□ 0.24
ATG4B-218ENST00000479554 LZTS2Q9BRK4 669 aa16.56■□□□□ 0.24
ATG4B-218ENST00000479554 TSHZ2Q9NRE2 1034 aa16.56■□□□□ 0.24
ATG4B-218ENST00000479554 SEC63Q9UGP8 760 aaKnown RBP16.56■□□□□ 0.24
ATG4B-218ENST00000479554 CHD7Q9P2D1 2997 aa16.56■□□□□ 0.24
ATG4B-218ENST00000479554 SORBS3O60504 671 aa16.55■□□□□ 0.24
ATG4B-218ENST00000479554 GGPS1O95749 300 aa16.55■□□□□ 0.24
ATG4B-218ENST00000479554 F2P00734 622 aa16.55■□□□□ 0.24
ATG4B-218ENST00000479554 ZNF286BP0CG31 522 aa16.55■□□□□ 0.24
ATG4B-218ENST00000479554 ACTN1P12814 892 aa16.55■□□□□ 0.24
ATG4B-218ENST00000479554 PSEN2P49810 448 aa16.55■□□□□ 0.24
ATG4B-218ENST00000479554 GDF6Q6KF10 455 aaPredicted RBP16.55■□□□□ 0.24
ATG4B-218ENST00000479554 TMTC2Q8N394 836 aa16.55■□□□□ 0.24
ATG4B-218ENST00000479554 C7orf31Q8N865 590 aa16.55■□□□□ 0.24
ATG4B-218ENST00000479554 SCN5AQ14524 2016 aa16.55■□□□□ 0.24
ATG4B-218ENST00000479554 GBF1Q92538 1859 aa16.54■□□□□ 0.24
ATG4B-218ENST00000479554 FRMPD4Q14CM0 1322 aa16.54■□□□□ 0.24
ATG4B-218ENST00000479554 PLEKHA8P1O95397 391 aa16.54■□□□□ 0.24
ATG4B-218ENST00000479554 IQCF3P0C7M6 154 aa16.54■□□□□ 0.24
ATG4B-218ENST00000479554 CALM1P0DP23 149 aa16.54■□□□□ 0.24
ATG4B-218ENST00000479554 CALM2P0DP24 149 aa16.54■□□□□ 0.24
ATG4B-218ENST00000479554 CALM3P0DP25 149 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms