RNA–Protein interactions for RNA: ENST00000479099.2

RC3H1-204, Transcript of ring finger and CCCH-type domains 1, humanhuman

TSL 3

Gene RC3H1, Length 481 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-204ENST00000479099 PIK3CAP42336 1068 aa6.91□□□□□ -1.3
RC3H1-204ENST00000479099 RAD52P43351 418 aa6.91□□□□□ -1.3
RC3H1-204ENST00000479099 ID4P47928 161 aa6.91□□□□□ -1.3
RC3H1-204ENST00000479099 MPP1Q00013 466 aa6.91□□□□□ -1.3
RC3H1-204ENST00000479099 PFKPQ01813 784 aa6.91□□□□□ -1.3
RC3H1-204ENST00000479099 PRR16Q569H4 304 aa6.91□□□□□ -1.3
RC3H1-204ENST00000479099 VPS53Q5VIR6 699 aa6.91□□□□□ -1.3
RC3H1-204ENST00000479099 SPATA1Q5VX52 437 aa6.91□□□□□ -1.3
RC3H1-204ENST00000479099 KIAA1614Q5VZ46 1190 aa6.91□□□□□ -1.3
RC3H1-204ENST00000479099 TBC1D1Q86TI0 1168 aaPredicted RBP6.91□□□□□ -1.3
RC3H1-204ENST00000479099 FAM26EQ8N5C1 309 aa6.91□□□□□ -1.3
RC3H1-204ENST00000479099 TMEM102Q8N9M5 508 aaPredicted RBP6.91□□□□□ -1.3
RC3H1-204ENST00000479099 JARID2Q92833 1246 aaPredicted RBP6.91□□□□□ -1.3
RC3H1-204ENST00000479099 CCDC47Q96A33 483 aaKnown RBP6.91□□□□□ -1.3
RC3H1-204ENST00000479099 ZBTB10Q96DT7 871 aa6.91□□□□□ -1.3
RC3H1-204ENST00000479099 MYRFLQ96LU7 910 aa6.91□□□□□ -1.3
RC3H1-204ENST00000479099 PDGFDQ9GZP0 370 aaPredicted RBP6.91□□□□□ -1.3
RC3H1-204ENST00000479099 UNC45AQ9H3U1 944 aa6.91□□□□□ -1.3
RC3H1-204ENST00000479099 RSAD1Q9HA92 442 aa6.91□□□□□ -1.3
RC3H1-204ENST00000479099 AGO4Q9HCK5 861 aaKnown RBP6.91□□□□□ -1.3
RC3H1-204ENST00000479099 SOX13Q9UN79 622 aa6.91□□□□□ -1.3
RC3H1-204ENST00000479099 TMX2Q9Y320 296 aa6.91□□□□□ -1.3
RC3H1-204ENST00000479099 TRAV20A0A0B4J274 112 aa6.9□□□□□ -1.3
RC3H1-204ENST00000479099 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.9□□□□□ -1.3
RC3H1-204ENST00000479099 M0R3H8 397 aa6.9□□□□□ -1.3
RC3H1-204ENST00000479099 KPNA6O60684 536 aa6.9□□□□□ -1.3
RC3H1-204ENST00000479099 ATE1O95260 518 aa6.9□□□□□ -1.3
RC3H1-204ENST00000479099 IFIT1P09914 478 aaKnown RBP6.9□□□□□ -1.3
RC3H1-204ENST00000479099 UBA7P41226 1012 aa6.9□□□□□ -1.3
RC3H1-204ENST00000479099 IARSP41252 1262 aaKnown RBP6.9□□□□□ -1.3
RC3H1-204ENST00000479099 ARL4DP49703 201 aa6.9□□□□□ -1.3
RC3H1-204ENST00000479099 KRT83P78385 493 aa6.9□□□□□ -1.3
RC3H1-204ENST00000479099 KRT85P78386 507 aa6.9□□□□□ -1.3
RC3H1-204ENST00000479099 NFIAQ12857 509 aa6.9□□□□□ -1.3
RC3H1-204ENST00000479099 AGAP9Q5VTM2 703 aa6.9□□□□□ -1.3
RC3H1-204ENST00000479099 ANKRD34AQ69YU3 496 aa6.9□□□□□ -1.3
RC3H1-204ENST00000479099 FAAH2Q6GMR7 532 aa6.9□□□□□ -1.3
RC3H1-204ENST00000479099 RETSATQ6NUM9 610 aa6.9□□□□□ -1.3
RC3H1-204ENST00000479099 TLDC1Q6P9B6 456 aa6.9□□□□□ -1.3
RC3H1-204ENST00000479099 CATIPQ7Z7H3 387 aa6.9□□□□□ -1.3
RC3H1-204ENST00000479099 GALNT5Q7Z7M9 940 aa6.9□□□□□ -1.3
RC3H1-204ENST00000479099 SNX32Q86XE0 403 aa6.9□□□□□ -1.3
RC3H1-204ENST00000479099 CMTR2Q8IYT2 770 aaKnown RBP6.9□□□□□ -1.3
RC3H1-204ENST00000479099 TAB3Q8N5C8 712 aaPredicted RBP6.9□□□□□ -1.3
RC3H1-204ENST00000479099 OTUD6BQ8N6M0 293 aa6.9□□□□□ -1.3
RC3H1-204ENST00000479099 TRIM63Q969Q1 353 aa6.9□□□□□ -1.3
RC3H1-204ENST00000479099 HSPBAP1Q96EW2 488 aa6.9□□□□□ -1.3
RC3H1-204ENST00000479099 NECAB3Q96P71 396 aaPredicted RBP6.9□□□□□ -1.3
RC3H1-204ENST00000479099 RNF208Q9H0X6 261 aa6.9□□□□□ -1.3
RC3H1-204ENST00000479099 MIR1-1HGQ9H1L0 117 aa6.9□□□□□ -1.3
RC3H1-204ENST00000479099 CXorf56Q9H5V9 222 aa6.9□□□□□ -1.3
RC3H1-204ENST00000479099 NMRK2Q9NPI5 230 aa6.9□□□□□ -1.3
RC3H1-204ENST00000479099 SMC4Q9NTJ3 1288 aa6.9□□□□□ -1.3
RC3H1-204ENST00000479099 RRN3Q9NYV6 651 aa6.9□□□□□ -1.3
RC3H1-204ENST00000479099 CEP131Q9UPN4 1083 aa6.9□□□□□ -1.3
RC3H1-204ENST00000479099 TNPO3Q9Y5L0 923 aaKnown RBP6.9□□□□□ -1.3
RC3H1-204ENST00000479099 SLC4A7Q9Y6M7 1214 aa6.9□□□□□ -1.3
RC3H1-204ENST00000479099 MEIS3P2A8K0S8 358 aa6.89□□□□□ -1.31
RC3H1-204ENST00000479099 AGRPO00253 132 aa6.89□□□□□ -1.31
RC3H1-204ENST00000479099 TOR1BO14657 336 aa6.89□□□□□ -1.31
RC3H1-204ENST00000479099 NCAM2O15394 837 aa6.89□□□□□ -1.31
RC3H1-204ENST00000479099 SART1O43290 800 aaKnown RBP6.89□□□□□ -1.31
RC3H1-204ENST00000479099 PLOD3O60568 738 aa6.89□□□□□ -1.31
RC3H1-204ENST00000479099 COBLO75128 1261 aa6.89□□□□□ -1.31
RC3H1-204ENST00000479099 ASLP04424 464 aa6.89□□□□□ -1.31
RC3H1-204ENST00000479099 RPS6KB1P23443 525 aa6.89□□□□□ -1.31
RC3H1-204ENST00000479099 CHKAP35790 457 aa6.89□□□□□ -1.31
RC3H1-204ENST00000479099 ERVK-21P61565 698 aa6.89□□□□□ -1.31
RC3H1-204ENST00000479099 BTKQ06187 659 aa6.89□□□□□ -1.31
RC3H1-204ENST00000479099 YOD1Q5VVQ6 348 aaPredicted RBP6.89□□□□□ -1.31
RC3H1-204ENST00000479099 PEAR1Q5VY43 1037 aaPredicted RBP6.89□□□□□ -1.31
RC3H1-204ENST00000479099 SWSAP1Q6NVH7 229 aa6.89□□□□□ -1.31
RC3H1-204ENST00000479099 B3GNT9Q6UX72 402 aa6.89□□□□□ -1.31
RC3H1-204ENST00000479099 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.89□□□□□ -1.31
RC3H1-204ENST00000479099 SRGAP1Q7Z6B7 1085 aa6.89□□□□□ -1.31
RC3H1-204ENST00000479099 RPAINQ86UA6 219 aa6.89□□□□□ -1.31
RC3H1-204ENST00000479099 OR2W6PQ8NHA6 318 aa6.89□□□□□ -1.31
RC3H1-204ENST00000479099 CCDC138Q96M89 665 aa6.89□□□□□ -1.31
RC3H1-204ENST00000479099 HHIPQ96QV1 700 aa6.89□□□□□ -1.31
RC3H1-204ENST00000479099 WDR12Q9GZL7 423 aaKnown RBP6.89□□□□□ -1.31
RC3H1-204ENST00000479099 C7orf69Q9H7B7 122 aa6.89□□□□□ -1.31
RC3H1-204ENST00000479099 PRKRIP1Q9H875 184 aaPredicted RBP6.89□□□□□ -1.31
RC3H1-204ENST00000479099 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.89□□□□□ -1.31
RC3H1-204ENST00000479099 DNM3Q9UQ16 869 aa6.89□□□□□ -1.31
RC3H1-204ENST00000479099 PCDHB5Q9Y5E4 795 aa6.89□□□□□ -1.31
RC3H1-204ENST00000479099 PCDHB14Q9Y5E9 798 aa6.89□□□□□ -1.31
RC3H1-204ENST00000479099 A0A1W2PQU0 124 aa6.88□□□□□ -1.31
RC3H1-204ENST00000479099 GTPBP10A4D1E9 387 aaKnown RBP6.88□□□□□ -1.31
RC3H1-204ENST00000479099 TRPA1O75762 1119 aa6.88□□□□□ -1.31
RC3H1-204ENST00000479099 TGFB1P01137 390 aa6.88□□□□□ -1.31
RC3H1-204ENST00000479099 EDN3P14138 238 aa6.88□□□□□ -1.31
RC3H1-204ENST00000479099 HSPA6P17066 643 aa6.88□□□□□ -1.31
RC3H1-204ENST00000479099 CAP2P40123 477 aa6.88□□□□□ -1.31
RC3H1-204ENST00000479099 NLRP12P59046 1061 aa6.88□□□□□ -1.31
RC3H1-204ENST00000479099 SUMO1P63165 101 aaKnown RBP6.88□□□□□ -1.31
RC3H1-204ENST00000479099 C19orf57Q0VDD7 668 aa6.88□□□□□ -1.31
RC3H1-204ENST00000479099 PPFIA1Q13136 1202 aa6.88□□□□□ -1.31
RC3H1-204ENST00000479099 G3BP1Q13283 466 aaKnown RBP eCLIP6.88□□□□□ -1.31
RC3H1-204ENST00000479099 ZNF460Q14592 562 aa6.88□□□□□ -1.31
RC3H1-204ENST00000479099 PCBP2Q15366 365 aaKnown RBP eCLIP6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms