RNA–Protein interactions for RNA: ENST00000479004.1

TRIM8-203, Transcript of tripartite motif containing 8, humanhuman

TSL 2

Gene TRIM8, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM8-203ENST00000479004 SUPT20HL2P0C7V6 817 aa23.61■■□□□ 1.37
TRIM8-203ENST00000479004 ACRP10323 421 aa23.61■■□□□ 1.37
TRIM8-203ENST00000479004 PGM5Q15124 567 aa23.61■■□□□ 1.37
TRIM8-203ENST00000479004 NFRKBQ6P4R8 1299 aa23.61■■□□□ 1.37
TRIM8-203ENST00000479004 VSIG10LQ86VR7 867 aa23.61■■□□□ 1.37
TRIM8-203ENST00000479004 FAM161BQ96MY7 647 aa23.61■■□□□ 1.37
TRIM8-203ENST00000479004 GUCD1Q96NT3 240 aa23.61■■□□□ 1.37
TRIM8-203ENST00000479004 IL23AQ9NPF7 189 aa23.61■■□□□ 1.37
TRIM8-203ENST00000479004 HSFX4A0A1B0GTS1 333 aaPredicted RBP23.6■■□□□ 1.37
TRIM8-203ENST00000479004 HSFX3A0A1B0GWH4 333 aaPredicted RBP23.6■■□□□ 1.37
TRIM8-203ENST00000479004 CCDC69A6NI79 296 aa23.6■■□□□ 1.37
TRIM8-203ENST00000479004 RGS20O76081 388 aa23.6■■□□□ 1.37
TRIM8-203ENST00000479004 MMP3P08254 477 aa23.6■■□□□ 1.37
TRIM8-203ENST00000479004 MYCLP12524 364 aaPredicted RBP23.6■■□□□ 1.37
TRIM8-203ENST00000479004 RASIP1Q5U651 963 aa23.6■■□□□ 1.37
TRIM8-203ENST00000479004 PSRC1Q6PGN9 363 aaPredicted RBP23.6■■□□□ 1.37
TRIM8-203ENST00000479004 NFXL1Q6ZNB6 911 aa23.6■■□□□ 1.37
TRIM8-203ENST00000479004 ZNF365Q70YC5 407 aa23.6■■□□□ 1.37
TRIM8-203ENST00000479004 PIBF1Q8WXW3 757 aa23.6■■□□□ 1.37
TRIM8-203ENST00000479004 EMID1Q96A84 441 aaPredicted RBP23.6■■□□□ 1.37
TRIM8-203ENST00000479004 LZTS2Q9BRK4 669 aa23.6■■□□□ 1.37
TRIM8-203ENST00000479004 WNT8AQ9H1J5 351 aa23.6■■□□□ 1.37
TRIM8-203ENST00000479004 SEMA6BQ9H3T3 888 aa23.6■■□□□ 1.37
TRIM8-203ENST00000479004 MRVI1Q9Y6F6 885 aa23.6■■□□□ 1.37
TRIM8-203ENST00000479004 CDH23Q9H251 3354 aa23.6■■□□□ 1.37
TRIM8-203ENST00000479004 GNAQP50148 359 aa23.59■■□□□ 1.37
TRIM8-203ENST00000479004 CCL23P55773 120 aa23.59■■□□□ 1.37
TRIM8-203ENST00000479004 PTPN11Q06124 597 aaPredicted RBP23.59■■□□□ 1.37
TRIM8-203ENST00000479004 FAM47CQ5HY64 1035 aa23.59■■□□□ 1.37
TRIM8-203ENST00000479004 FCHSD1Q86WN1 690 aa23.59■■□□□ 1.37
TRIM8-203ENST00000479004 IL31RAQ8NI17 732 aa23.59■■□□□ 1.37
TRIM8-203ENST00000479004 CYP2C9P11712 490 aa23.58■■□□□ 1.37
TRIM8-203ENST00000479004 LAMC2Q13753 1193 aa23.58■■□□□ 1.37
TRIM8-203ENST00000479004 RNF20Q5VTR2 975 aa23.58■■□□□ 1.37
TRIM8-203ENST00000479004 KCNV1Q6PIU1 500 aa23.58■■□□□ 1.37
TRIM8-203ENST00000479004 SRBD1Q8N5C6 995 aaKnown RBP23.58■■□□□ 1.37
TRIM8-203ENST00000479004 PPP1R13LQ8WUF5 828 aa23.58■■□□□ 1.37
TRIM8-203ENST00000479004 RRP36Q96EU6 259 aaKnown RBP23.58■■□□□ 1.37
TRIM8-203ENST00000479004 LRRC2Q9BYS8 371 aa23.58■■□□□ 1.37
TRIM8-203ENST00000479004 TTYH1Q9H313 450 aaPredicted RBP23.58■■□□□ 1.37
TRIM8-203ENST00000479004 PLEKHA8P1O95397 391 aa23.57■■□□□ 1.36
TRIM8-203ENST00000479004 CALM1P0DP23 149 aa23.57■■□□□ 1.36
TRIM8-203ENST00000479004 CALM2P0DP24 149 aa23.57■■□□□ 1.36
TRIM8-203ENST00000479004 CALM3P0DP25 149 aa23.57■■□□□ 1.36
TRIM8-203ENST00000479004 RXRAP19793 462 aa23.57■■□□□ 1.36
TRIM8-203ENST00000479004 CASTP20810 708 aaKnown RBP23.57■■□□□ 1.36
TRIM8-203ENST00000479004 CCND2P30279 289 aa23.57■■□□□ 1.36
TRIM8-203ENST00000479004 HERVK_113Q902F9 699 aa23.57■■□□□ 1.36
TRIM8-203ENST00000479004 KAT2BQ92831 832 aa23.57■■□□□ 1.36
TRIM8-203ENST00000479004 SLC12A7Q9Y666 1083 aa23.57■■□□□ 1.36
TRIM8-203ENST00000479004 TMEM265A0A087WTH1 108 aa23.56■■□□□ 1.36
TRIM8-203ENST00000479004 FGBP02675 491 aa23.56■■□□□ 1.36
TRIM8-203ENST00000479004 DGKDQ16760 1214 aa23.56■■□□□ 1.36
TRIM8-203ENST00000479004 SGMS1Q86VZ5 419 aa23.56■■□□□ 1.36
TRIM8-203ENST00000479004 DHX37Q8IY37 1157 aaKnown RBP23.56■■□□□ 1.36
TRIM8-203ENST00000479004 RPUSD2Q8IZ73 545 aaKnown RBP23.56■■□□□ 1.36
TRIM8-203ENST00000479004 NEK1Q96PY6 1258 aa23.56■■□□□ 1.36
TRIM8-203ENST00000479004 FRMPD4Q14CM0 1322 aa23.56■■□□□ 1.36
TRIM8-203ENST00000479004 TSGA10IPQ3SY00 556 aa23.55■■□□□ 1.36
TRIM8-203ENST00000479004 SESTD1Q86VW0 696 aa23.55■■□□□ 1.36
TRIM8-203ENST00000479004 CMTR1Q8N1G2 835 aaKnown RBP23.55■■□□□ 1.36
TRIM8-203ENST00000479004 PPTC7Q8NI37 304 aa23.55■■□□□ 1.36
TRIM8-203ENST00000479004 VWCEQ96DN2 955 aa23.55■■□□□ 1.36
TRIM8-203ENST00000479004 SCLYQ96I15 445 aa23.55■■□□□ 1.36
TRIM8-203ENST00000479004 ZFP91Q96JP5 570 aaPredicted RBP23.55■■□□□ 1.36
TRIM8-203ENST00000479004 SEC63Q9UGP8 760 aaKnown RBP23.55■■□□□ 1.36
TRIM8-203ENST00000479004 EYSQ5T1H1 3165 aa23.54■■□□□ 1.36
TRIM8-203ENST00000479004 TGFB3P10600 412 aa23.54■■□□□ 1.36
TRIM8-203ENST00000479004 EXOSC10Q01780 885 aaKnown RBP23.54■■□□□ 1.36
TRIM8-203ENST00000479004 SP2Q02086 613 aa23.54■■□□□ 1.36
TRIM8-203ENST00000479004 CELF3Q5SZQ8 465 aaKnown RBP23.54■■□□□ 1.36
TRIM8-203ENST00000479004 MYSM1Q5VVJ2 828 aa23.54■■□□□ 1.36
TRIM8-203ENST00000479004 RAB11FIP4Q86YS3 637 aa23.54■■□□□ 1.36
TRIM8-203ENST00000479004 RASEFQ8IZ41 740 aa23.54■■□□□ 1.36
TRIM8-203ENST00000479004 FANCBQ8NB91 859 aa23.54■■□□□ 1.36
TRIM8-203ENST00000479004 CDX2Q99626 313 aaPredicted RBP23.54■■□□□ 1.36
TRIM8-203ENST00000479004 PIK3CDO00329 1044 aa23.53■■□□□ 1.36
TRIM8-203ENST00000479004 DNAJB2P25686 324 aa23.53■■□□□ 1.36
TRIM8-203ENST00000479004 CHMP4BP1P59074 171 aa23.53■■□□□ 1.36
TRIM8-203ENST00000479004 MRPS9P82933 396 aaKnown RBP23.53■■□□□ 1.36
TRIM8-203ENST00000479004 SLC17A8Q8NDX2 589 aa23.53■■□□□ 1.36
TRIM8-203ENST00000479004 GPKOWQ92917 476 aaPredicted RBP eCLIP23.53■■□□□ 1.36
TRIM8-203ENST00000479004 CXXC1Q9P0U4 656 aaPredicted RBP23.53■■□□□ 1.36
TRIM8-203ENST00000479004 SCN5AQ14524 2016 aa23.52■■□□□ 1.36
TRIM8-203ENST00000479004 GRXCR1A8MXD5 290 aa23.52■■□□□ 1.36
TRIM8-203ENST00000479004 MEIS2O14770 477 aa23.52■■□□□ 1.36
TRIM8-203ENST00000479004 STAM2O75886 525 aa23.52■■□□□ 1.36
TRIM8-203ENST00000479004 GGPS1O95749 300 aa23.52■■□□□ 1.36
TRIM8-203ENST00000479004 HOXD8P13378 290 aaPredicted RBP23.52■■□□□ 1.36
TRIM8-203ENST00000479004 UBA1P22314 1058 aaKnown RBP23.52■■□□□ 1.36
TRIM8-203ENST00000479004 USP17L6PQ6QN14 398 aa23.52■■□□□ 1.36
TRIM8-203ENST00000479004 TMTC3Q6ZXV5 915 aa23.52■■□□□ 1.36
TRIM8-203ENST00000479004 DHX32Q7L7V1 743 aaKnown RBP23.52■■□□□ 1.36
TRIM8-203ENST00000479004 OTOP2Q7RTS6 562 aa23.52■■□□□ 1.36
TRIM8-203ENST00000479004 SMARCC2Q8TAQ2 1214 aa23.52■■□□□ 1.36
TRIM8-203ENST00000479004 CUL5Q93034 780 aa23.52■■□□□ 1.36
TRIM8-203ENST00000479004 MTIF3Q9H2K0 278 aaKnown RBP23.52■■□□□ 1.36
TRIM8-203ENST00000479004 PITPNM1O00562 1244 aa23.51■■□□□ 1.35
TRIM8-203ENST00000479004 PPFIA4O75335 1185 aa23.51■■□□□ 1.35
TRIM8-203ENST00000479004 F2P00734 622 aa23.51■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms