RNA–Protein interactions for RNA: ENST00000478958.5

LRRFIP1-211, Transcript of LRR binding FLII interacting protein 1, humanhuman

TSL 1 (best)

Gene LRRFIP1, Length 2,869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRFIP1-211ENST00000478958 DUSP9Q99956 384 aaKnown RBP12.21□□□□□ -0.45
LRRFIP1-211ENST00000478958 MMRN2Q9H8L6 949 aa12.21□□□□□ -0.45
LRRFIP1-211ENST00000478958 VIPAS39Q9H9C1 493 aa12.21□□□□□ -0.45
LRRFIP1-211ENST00000478958 SLC39A2Q9NP94 309 aa12.21□□□□□ -0.45
LRRFIP1-211ENST00000478958 UBR2Q8IWV8 1755 aa12.21□□□□□ -0.46
LRRFIP1-211ENST00000478958 NUTM2BA6NNL0 878 aaPredicted RBP12.2□□□□□ -0.46
LRRFIP1-211ENST00000478958 NUTM2EB1AL46 878 aaPredicted RBP12.2□□□□□ -0.46
LRRFIP1-211ENST00000478958 SRGNP10124 158 aa12.2□□□□□ -0.46
LRRFIP1-211ENST00000478958 MECOMQ03112 1051 aa12.2□□□□□ -0.46
LRRFIP1-211ENST00000478958 KCTD19Q17RG1 926 aaPredicted RBP12.2□□□□□ -0.46
LRRFIP1-211ENST00000478958 MICALCLQ6ZW33 695 aa12.2□□□□□ -0.46
LRRFIP1-211ENST00000478958 MAB21L3Q8N8X9 362 aa12.2□□□□□ -0.46
LRRFIP1-211ENST00000478958 EHBP1Q8NDI1 1231 aa12.2□□□□□ -0.46
LRRFIP1-211ENST00000478958 PYM1Q9BRP8 204 aaKnown RBP12.2□□□□□ -0.46
LRRFIP1-211ENST00000478958 IFIH1Q9BYX4 1025 aaKnown RBP12.2□□□□□ -0.46
LRRFIP1-211ENST00000478958 SLC40A1Q9NP59 571 aa12.2□□□□□ -0.46
LRRFIP1-211ENST00000478958 LMCD1Q9NZU5 365 aa12.2□□□□□ -0.46
LRRFIP1-211ENST00000478958 ZNF232Q9UNY5 417 aa12.2□□□□□ -0.46
LRRFIP1-211ENST00000478958 A0A1W2PQC6 194 aa12.2□□□□□ -0.46
LRRFIP1-211ENST00000478958 USP17L3A6NCW0 530 aa12.2□□□□□ -0.46
LRRFIP1-211ENST00000478958 USP17L4A6NCW7 530 aa12.2□□□□□ -0.46
LRRFIP1-211ENST00000478958 NDUFAB1O14561 156 aa12.2□□□□□ -0.46
LRRFIP1-211ENST00000478958 EPHB6O15197 1021 aa12.2□□□□□ -0.46
LRRFIP1-211ENST00000478958 RASSF9O75901 435 aa12.2□□□□□ -0.46
LRRFIP1-211ENST00000478958 MCM3P25205 808 aa12.2□□□□□ -0.46
LRRFIP1-211ENST00000478958 ENOX2Q16206 610 aaKnown RBP12.2□□□□□ -0.46
LRRFIP1-211ENST00000478958 ARL6IP4Q66PJ3 421 aaKnown RBP12.2□□□□□ -0.46
LRRFIP1-211ENST00000478958 USP17L1Q7RTZ2 530 aa12.2□□□□□ -0.46
LRRFIP1-211ENST00000478958 PARP9Q8IXQ6 854 aa12.2□□□□□ -0.46
LRRFIP1-211ENST00000478958 PNMA1Q8ND90 353 aa12.2□□□□□ -0.46
LRRFIP1-211ENST00000478958 TCP11Q8WWU5 503 aa12.2□□□□□ -0.46
LRRFIP1-211ENST00000478958 BRIP1Q9BX63 1249 aa12.2□□□□□ -0.46
LRRFIP1-211ENST00000478958 VAT1LQ9HCJ6 419 aa12.2□□□□□ -0.46
LRRFIP1-211ENST00000478958 ZC3H4Q9UPT8 1303 aaKnown RBP12.2□□□□□ -0.46
LRRFIP1-211ENST00000478958 AKR1B10O60218 316 aa12.2□□□□□ -0.46
LRRFIP1-211ENST00000478958 SSBP05455 408 aaKnown RBP eCLIP12.2□□□□□ -0.46
LRRFIP1-211ENST00000478958 CALML3P27482 149 aa12.2□□□□□ -0.46
LRRFIP1-211ENST00000478958 KIF5BP33176 963 aa12.2□□□□□ -0.46
LRRFIP1-211ENST00000478958 RANBP1P43487 201 aa12.2□□□□□ -0.46
LRRFIP1-211ENST00000478958 CRKLP46109 303 aaKnown RBP12.2□□□□□ -0.46
LRRFIP1-211ENST00000478958 RNASE9P60153 205 aaKnown RBP12.2□□□□□ -0.46
LRRFIP1-211ENST00000478958 TXNRD1Q16881 649 aa12.2□□□□□ -0.46
LRRFIP1-211ENST00000478958 KCTD16Q68DU8 428 aa12.2□□□□□ -0.46
LRRFIP1-211ENST00000478958 CAPRIN2Q6IMN6 1127 aaKnown RBP12.2□□□□□ -0.46
LRRFIP1-211ENST00000478958 CCDC70Q6NSX1 233 aa12.2□□□□□ -0.46
LRRFIP1-211ENST00000478958 GIMAP8Q8ND71 665 aaPredicted RBP12.2□□□□□ -0.46
LRRFIP1-211ENST00000478958 FAM84BQ96KN1 310 aaPredicted RBP12.2□□□□□ -0.46
LRRFIP1-211ENST00000478958 THAP9Q9H5L6 903 aa12.2□□□□□ -0.46
LRRFIP1-211ENST00000478958 VCPKMTQ9H867 229 aa12.2□□□□□ -0.46
LRRFIP1-211ENST00000478958 PCDHA4Q9UN74 947 aa12.2□□□□□ -0.46
LRRFIP1-211ENST00000478958 MYH6P13533 1939 aa12.19□□□□□ -0.46
LRRFIP1-211ENST00000478958 BUB1O43683 1085 aa12.19□□□□□ -0.46
LRRFIP1-211ENST00000478958 CCNT1O60563 726 aaKnown RBP12.19□□□□□ -0.46
LRRFIP1-211ENST00000478958 RTN3O95197 1032 aaPredicted RBP12.19□□□□□ -0.46
LRRFIP1-211ENST00000478958 SLC8A1P32418 973 aa12.19□□□□□ -0.46
LRRFIP1-211ENST00000478958 TECP42680 631 aa12.19□□□□□ -0.46
LRRFIP1-211ENST00000478958 KCNQ4P56696 695 aa12.19□□□□□ -0.46
LRRFIP1-211ENST00000478958 ZBED6P86452 979 aa12.19□□□□□ -0.46
LRRFIP1-211ENST00000478958 LAMB3Q13751 1172 aa12.19□□□□□ -0.46
LRRFIP1-211ENST00000478958 DYMQ7RTS9 669 aa12.19□□□□□ -0.46
LRRFIP1-211ENST00000478958 P2RX5Q93086 422 aa12.19□□□□□ -0.46
LRRFIP1-211ENST00000478958 CHD4Q14839 1912 aa12.19□□□□□ -0.46
LRRFIP1-211ENST00000478958 BAZ2AQ9UIF9 1905 aaKnown RBP12.19□□□□□ -0.46
LRRFIP1-211ENST00000478958 MEA1Q16626 185 aa12.19□□□□□ -0.46
LRRFIP1-211ENST00000478958 CABP7Q86V35 215 aa12.19□□□□□ -0.46
LRRFIP1-211ENST00000478958 SLC44A5Q8NCS7 719 aa12.19□□□□□ -0.46
LRRFIP1-211ENST00000478958 EZH1Q92800 747 aaPredicted RBP12.19□□□□□ -0.46
LRRFIP1-211ENST00000478958 NSUN4Q96CB9 384 aaKnown RBP12.19□□□□□ -0.46
LRRFIP1-211ENST00000478958 CRNKL1Q9BZJ0 848 aaKnown RBP12.19□□□□□ -0.46
LRRFIP1-211ENST00000478958 TTYH3Q9C0H2 523 aa12.19□□□□□ -0.46
LRRFIP1-211ENST00000478958 TCP11L1Q9NUJ3 509 aa12.19□□□□□ -0.46
LRRFIP1-211ENST00000478958 PCDHA6Q9UN73 950 aa12.19□□□□□ -0.46
LRRFIP1-211ENST00000478958 PCDHA8Q9Y5H6 950 aa12.19□□□□□ -0.46
LRRFIP1-211ENST00000478958 SLIT2O94813 1529 aa12.18□□□□□ -0.46
LRRFIP1-211ENST00000478958 COL1A1P02452 1464 aaPredicted RBP12.18□□□□□ -0.46
LRRFIP1-211ENST00000478958 ESYT3A0FGR9 886 aa12.18□□□□□ -0.46
LRRFIP1-211ENST00000478958 RHOBTB3O94955 611 aa12.18□□□□□ -0.46
LRRFIP1-211ENST00000478958 VAV2P52735 878 aa12.18□□□□□ -0.46
LRRFIP1-211ENST00000478958 RRAGAQ7L523 313 aa12.18□□□□□ -0.46
LRRFIP1-211ENST00000478958 TMC4Q7Z404 712 aa12.18□□□□□ -0.46
LRRFIP1-211ENST00000478958 CREG2Q8IUH2 290 aa12.18□□□□□ -0.46
LRRFIP1-211ENST00000478958 CCDC155Q8N6L0 562 aa12.18□□□□□ -0.46
LRRFIP1-211ENST00000478958 CELF1Q92879 486 aaKnown RBP12.18□□□□□ -0.46
LRRFIP1-211ENST00000478958 MS4A14Q96JA4 679 aa12.18□□□□□ -0.46
LRRFIP1-211ENST00000478958 UIMC1Q96RL1 719 aa12.18□□□□□ -0.46
LRRFIP1-211ENST00000478958 MKNK2Q9HBH9 465 aa12.18□□□□□ -0.46
LRRFIP1-211ENST00000478958 CCDC87Q9NVE4 849 aa12.18□□□□□ -0.46
LRRFIP1-211ENST00000478958 BCL9LQ86UU0 1499 aa12.18□□□□□ -0.46
LRRFIP1-211ENST00000478958 TACC1O75410 805 aa12.18□□□□□ -0.46
LRRFIP1-211ENST00000478958 NTSR2O95665 410 aa12.18□□□□□ -0.46
LRRFIP1-211ENST00000478958 PYGBP11216 843 aa12.18□□□□□ -0.46
LRRFIP1-211ENST00000478958 EIF4A3P38919 411 aaKnown RBP12.18□□□□□ -0.46
LRRFIP1-211ENST00000478958 ATP1A2P50993 1020 aa12.18□□□□□ -0.46
LRRFIP1-211ENST00000478958 PLCB4Q15147 1175 aa12.18□□□□□ -0.46
LRRFIP1-211ENST00000478958 ERFEQ4G0M1 354 aa12.18□□□□□ -0.46
LRRFIP1-211ENST00000478958 NCAPG2Q86XI2 1143 aa12.18□□□□□ -0.46
LRRFIP1-211ENST00000478958 CCDC13Q8IYE1 715 aa12.18□□□□□ -0.46
LRRFIP1-211ENST00000478958 SH2D3CQ8N5H7 860 aa12.18□□□□□ -0.46
LRRFIP1-211ENST00000478958 SPATA4Q8NEY3 305 aa12.18□□□□□ -0.46
LRRFIP1-211ENST00000478958 MAGEC3Q8TD91 643 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms