RNA–Protein interactions for RNA: ENST00000478776.1

VLDLR-204, Transcript of very low density lipoprotein receptor, humanhuman

TSL 3

Gene VLDLR, Length 510 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLR-204ENST00000478776 KISS1RQ969F8 398 aaPredicted RBP5.51□□□□□ -1.53
VLDLR-204ENST00000478776 MMP19Q99542 508 aa5.51□□□□□ -1.53
VLDLR-204ENST00000478776 C1QTNF3Q9BXJ4 246 aa5.51□□□□□ -1.53
VLDLR-204ENST00000478776 NGRNQ9NPE2 291 aaKnown RBP5.51□□□□□ -1.53
VLDLR-204ENST00000478776 GPRC5CQ9NQ84 441 aa5.51□□□□□ -1.53
VLDLR-204ENST00000478776 SCAMP3O14828 347 aaKnown RBP5.5□□□□□ -1.53
VLDLR-204ENST00000478776 CYP1A1P04798 512 aaPredicted RBP5.5□□□□□ -1.53
VLDLR-204ENST00000478776 THBDP07204 575 aa5.5□□□□□ -1.53
VLDLR-204ENST00000478776 GIPRP48546 466 aa5.5□□□□□ -1.53
VLDLR-204ENST00000478776 PRAMEF18Q5VWM3 479 aa5.5□□□□□ -1.53
VLDLR-204ENST00000478776 TEX2Q8IWB9 1127 aa5.5□□□□□ -1.53
VLDLR-204ENST00000478776 FAM26EQ8N5C1 309 aa5.5□□□□□ -1.53
VLDLR-204ENST00000478776 SLC16A11Q8NCK7 471 aa5.5□□□□□ -1.53
VLDLR-204ENST00000478776 PPP1R14AQ96A00 147 aa5.5□□□□□ -1.53
VLDLR-204ENST00000478776 APBA2Q99767 749 aa5.5□□□□□ -1.53
VLDLR-204ENST00000478776 SGSM2O43147 1006 aa5.49□□□□□ -1.53
VLDLR-204ENST00000478776 SUV39H1O43463 412 aa5.49□□□□□ -1.53
VLDLR-204ENST00000478776 GDF5P43026 501 aa5.49□□□□□ -1.53
VLDLR-204ENST00000478776 SOX9P48436 509 aa5.49□□□□□ -1.53
VLDLR-204ENST00000478776 NKX3-2P78367 333 aa5.49□□□□□ -1.53
VLDLR-204ENST00000478776 HDLBPQ00341 1268 aaKnown RBP5.49□□□□□ -1.53
VLDLR-204ENST00000478776 IQCEQ6IPM2 695 aa5.49□□□□□ -1.53
VLDLR-204ENST00000478776 VHLLQ6RSH7 139 aa5.49□□□□□ -1.53
VLDLR-204ENST00000478776 PLEKHH3Q7Z736 793 aa5.49□□□□□ -1.53
VLDLR-204ENST00000478776 MIB1Q86YT6 1006 aa5.49□□□□□ -1.53
VLDLR-204ENST00000478776 BVESQ8NE79 360 aa5.49□□□□□ -1.53
VLDLR-204ENST00000478776 KLHL6Q8WZ60 621 aa5.49□□□□□ -1.53
VLDLR-204ENST00000478776 ST6GALNAC2Q9UJ37 374 aa5.49□□□□□ -1.53
VLDLR-204ENST00000478776 ITGA1P56199 1179 aa5.48□□□□□ -1.53
VLDLR-204ENST00000478776 RPL11P62913 178 aaKnown RBP5.48□□□□□ -1.53
VLDLR-204ENST00000478776 MROH9Q5TGP6 573 aa5.48□□□□□ -1.53
VLDLR-204ENST00000478776 LIMS2Q7Z4I7 341 aa5.48□□□□□ -1.53
VLDLR-204ENST00000478776 METTL16Q86W50 562 aaKnown RBP5.48□□□□□ -1.53
VLDLR-204ENST00000478776 FAM126BQ8IXS8 530 aa5.48□□□□□ -1.53
VLDLR-204ENST00000478776 SH3RF3Q8TEJ3 882 aaPredicted RBP5.48□□□□□ -1.53
VLDLR-204ENST00000478776 DPF3Q92784 378 aa5.48□□□□□ -1.53
VLDLR-204ENST00000478776 COPS5Q92905 334 aa5.48□□□□□ -1.53
VLDLR-204ENST00000478776 GPRASP2Q96D09 838 aa5.48□□□□□ -1.53
VLDLR-204ENST00000478776 TRMT2BQ96GJ1 504 aaKnown RBP5.48□□□□□ -1.53
VLDLR-204ENST00000478776 SYT3Q9BQG1 590 aa5.48□□□□□ -1.53
VLDLR-204ENST00000478776 L2HGDHQ9H9P8 463 aa5.48□□□□□ -1.53
VLDLR-204ENST00000478776 JADE2Q9NQC1 790 aa5.48□□□□□ -1.53
VLDLR-204ENST00000478776 EMC9Q9Y3B6 208 aa5.48□□□□□ -1.53
VLDLR-204ENST00000478776 TIMM13Q9Y5L4 95 aaPredicted RBP5.48□□□□□ -1.53
VLDLR-204ENST00000478776 NPEPPSL1A6NEC2 478 aa5.47□□□□□ -1.53
VLDLR-204ENST00000478776 E9PSI1 815 aa5.47□□□□□ -1.53
VLDLR-204ENST00000478776 LAMTOR5O43504 91 aa5.47□□□□□ -1.53
VLDLR-204ENST00000478776 MYO1BO43795 1136 aa5.47□□□□□ -1.53
VLDLR-204ENST00000478776 C6P13671 934 aa5.47□□□□□ -1.53
VLDLR-204ENST00000478776 STAT5AP42229 794 aa5.47□□□□□ -1.53
VLDLR-204ENST00000478776 SLC6A11P48066 632 aa5.47□□□□□ -1.53
VLDLR-204ENST00000478776 MBLAC2Q68D91 279 aa5.47□□□□□ -1.53
VLDLR-204ENST00000478776 CEP68Q76N32 757 aa5.47□□□□□ -1.53
VLDLR-204ENST00000478776 CDK5RAP1Q96SZ6 601 aaKnown RBP5.47□□□□□ -1.53
VLDLR-204ENST00000478776 CYP26B1Q9NR63 512 aa5.47□□□□□ -1.53
VLDLR-204ENST00000478776 APEX2Q9UBZ4 518 aa5.47□□□□□ -1.53
VLDLR-204ENST00000478776 COA3Q9Y2R0 106 aaPredicted RBP5.47□□□□□ -1.53
VLDLR-204ENST00000478776 C9orf118A6NHY6 69 aa5.46□□□□□ -1.54
VLDLR-204ENST00000478776 CYP7B1O75881 506 aa5.46□□□□□ -1.54
VLDLR-204ENST00000478776 GTF2A2P52657 109 aa5.46□□□□□ -1.54
VLDLR-204ENST00000478776 ZNF143P52747 638 aaPredicted RBP5.46□□□□□ -1.54
VLDLR-204ENST00000478776 HMGA2P52926 109 aa5.46□□□□□ -1.54
VLDLR-204ENST00000478776 GTF2IRD2BQ6EKJ0 949 aa5.46□□□□□ -1.54
VLDLR-204ENST00000478776 USP51Q70EK9 711 aa5.46□□□□□ -1.54
VLDLR-204ENST00000478776 GTF2IRD2Q86UP8 949 aa5.46□□□□□ -1.54
VLDLR-204ENST00000478776 SORCS2Q96PQ0 1159 aa5.46□□□□□ -1.54
VLDLR-204ENST00000478776 KRTAP17-1Q9BYP8 105 aa5.46□□□□□ -1.54
VLDLR-204ENST00000478776 KRTAP3-1Q9BYR8 98 aa5.46□□□□□ -1.54
VLDLR-204ENST00000478776 TMEM168Q9H0V1 697 aa5.46□□□□□ -1.54
VLDLR-204ENST00000478776 FPR2P25090 351 aa5.45□□□□□ -1.54
VLDLR-204ENST00000478776 NASPP49321 788 aaPredicted RBP5.45□□□□□ -1.54
VLDLR-204ENST00000478776 CHRNA2Q15822 529 aa5.45□□□□□ -1.54
VLDLR-204ENST00000478776 INF2Q27J81 1249 aa5.45□□□□□ -1.54
VLDLR-204ENST00000478776 SPRED1Q7Z699 444 aa5.45□□□□□ -1.54
VLDLR-204ENST00000478776 NT5DC4Q86YG4 428 aa5.45□□□□□ -1.54
VLDLR-204ENST00000478776 RIOX2Q8IUF8 465 aa5.45□□□□□ -1.54
VLDLR-204ENST00000478776 TMEM169Q96HH4 297 aa5.45□□□□□ -1.54
VLDLR-204ENST00000478776 CHAMP1Q96JM3 812 aa5.45□□□□□ -1.54
VLDLR-204ENST00000478776 CLIC6Q96NY7 704 aa5.45□□□□□ -1.54
VLDLR-204ENST00000478776 DEF6Q9H4E7 631 aa5.45□□□□□ -1.54
VLDLR-204ENST00000478776 TCF3P15923 654 aa5.44□□□□□ -1.54
VLDLR-204ENST00000478776 TACR2P21452 398 aa5.44□□□□□ -1.54
VLDLR-204ENST00000478776 IL13P35225 146 aa5.44□□□□□ -1.54
VLDLR-204ENST00000478776 CASP7P55210 303 aa5.44□□□□□ -1.54
VLDLR-204ENST00000478776 NCAPHQ15003 741 aa5.44□□□□□ -1.54
VLDLR-204ENST00000478776 PRR31Q5SQ13 230 aa5.44□□□□□ -1.54
VLDLR-204ENST00000478776 E4F1Q66K89 784 aaPredicted RBP5.44□□□□□ -1.54
VLDLR-204ENST00000478776 ARHGEF18Q6ZSZ5 1173 aa5.44□□□□□ -1.54
VLDLR-204ENST00000478776 CIR1Q86X95 450 aaPredicted RBP5.44□□□□□ -1.54
VLDLR-204ENST00000478776 TRIM59Q8IWR1 403 aa5.44□□□□□ -1.54
VLDLR-204ENST00000478776 RASGRP4Q8TDF6 673 aa5.44□□□□□ -1.54
VLDLR-204ENST00000478776 DIO2Q92813 273 aa5.44□□□□□ -1.54
VLDLR-204ENST00000478776 TOE1Q96GM8 510 aaKnown RBP5.44□□□□□ -1.54
VLDLR-204ENST00000478776 TSC22D4Q9Y3Q8 395 aa5.44□□□□□ -1.54
VLDLR-204ENST00000478776 HGSO14964 777 aaPredicted RBP5.43□□□□□ -1.54
VLDLR-204ENST00000478776 MEFVO15553 781 aaPredicted RBP5.43□□□□□ -1.54
VLDLR-204ENST00000478776 B4GALT3O60512 393 aa5.43□□□□□ -1.54
VLDLR-204ENST00000478776 BCL6P41182 706 aa5.43□□□□□ -1.54
VLDLR-204ENST00000478776 CR1LQ2VPA4 569 aa5.43□□□□□ -1.54
VLDLR-204ENST00000478776 ZNF513Q8N8E2 541 aaPredicted RBP5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms