RNA–Protein interactions for RNA: ENST00000478254.5

GFM1-207, Transcript of G elongation factor mitochondrial 1, humanhuman

TSL 5

Gene GFM1, Length 3,470 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFM1-207ENST00000478254 PCK1P35558 622 aa12.53□□□□□ -0.4
GFM1-207ENST00000478254 PPP2R2AP63151 447 aa12.53□□□□□ -0.4
GFM1-207ENST00000478254 KLHL30Q0D2K2 578 aa12.53□□□□□ -0.4
GFM1-207ENST00000478254 THEMIS2Q5TEJ8 643 aa12.53□□□□□ -0.4
GFM1-207ENST00000478254 CAPRIN2Q6IMN6 1127 aaKnown RBP12.53□□□□□ -0.4
GFM1-207ENST00000478254 RUFY4Q6ZNE9 571 aa12.53□□□□□ -0.4
GFM1-207ENST00000478254 ENAHQ8N8S7 591 aaPredicted RBP12.53□□□□□ -0.4
GFM1-207ENST00000478254 TTLL11Q8NHH1 800 aa12.53□□□□□ -0.4
GFM1-207ENST00000478254 TMEM60Q9H2L4 133 aa12.53□□□□□ -0.4
GFM1-207ENST00000478254 LUC7LQ9NQ29 371 aaKnown RBP12.53□□□□□ -0.4
GFM1-207ENST00000478254 SRCAPQ6ZRS2 3230 aa12.52□□□□□ -0.4
GFM1-207ENST00000478254 IRS4O14654 1257 aaPredicted RBP12.52□□□□□ -0.4
GFM1-207ENST00000478254 MMEP08473 750 aa12.52□□□□□ -0.4
GFM1-207ENST00000478254 ERFP50548 548 aa12.52□□□□□ -0.4
GFM1-207ENST00000478254 RASGRF1Q13972 1273 aa12.52□□□□□ -0.4
GFM1-207ENST00000478254 SLC9C1Q4G0N8 1177 aa12.52□□□□□ -0.4
GFM1-207ENST00000478254 PDXDC2PQ6P474 469 aa12.52□□□□□ -0.4
GFM1-207ENST00000478254 FAM47EQ6ZV65 393 aa12.52□□□□□ -0.4
GFM1-207ENST00000478254 CABP7Q86V35 215 aa12.52□□□□□ -0.4
GFM1-207ENST00000478254 SLC17A8Q8NDX2 589 aa12.52□□□□□ -0.4
GFM1-207ENST00000478254 SHISA4Q96DD7 197 aa12.52□□□□□ -0.4
GFM1-207ENST00000478254 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.52□□□□□ -0.46e-7■■■■■ 62.1
GFM1-207ENST00000478254 DNAJC17Q9NVM6 304 aaKnown RBP12.52□□□□□ -0.4
GFM1-207ENST00000478254 CCDC189A1A4V9 331 aa12.52□□□□□ -0.41
GFM1-207ENST00000478254 LRRC10BA6NIK2 292 aa12.52□□□□□ -0.41
GFM1-207ENST00000478254 RASSF9O75901 435 aa12.52□□□□□ -0.41
GFM1-207ENST00000478254 SH3RF1Q7Z6J0 888 aa12.52□□□□□ -0.41
GFM1-207ENST00000478254 FAM228AQ86W67 206 aa12.52□□□□□ -0.41
GFM1-207ENST00000478254 CCDC50Q8IVM0 306 aa12.52□□□□□ -0.41
GFM1-207ENST00000478254 IQCKQ8N0W5 287 aa12.52□□□□□ -0.41
GFM1-207ENST00000478254 ZSCAN10Q96SZ4 725 aaPredicted RBP12.52□□□□□ -0.41
GFM1-207ENST00000478254 TRIM51Q9BSJ1 452 aa12.52□□□□□ -0.41
GFM1-207ENST00000478254 BICDL2A1A5D9 508 aa12.52□□□□□ -0.41
GFM1-207ENST00000478254 CYP27B1O15528 508 aa12.52□□□□□ -0.41
GFM1-207ENST00000478254 ATP6V1G2O95670 118 aa12.52□□□□□ -0.41
GFM1-207ENST00000478254 KRT18P05783 430 aaKnown RBP12.52□□□□□ -0.41
GFM1-207ENST00000478254 ABCB4P21439 1286 aa12.52□□□□□ -0.41
GFM1-207ENST00000478254 PLTPP55058 493 aa12.52□□□□□ -0.41
GFM1-207ENST00000478254 DDR1Q08345 913 aa12.52□□□□□ -0.41
GFM1-207ENST00000478254 ITGB3BPQ13352 177 aaPredicted RBP12.52□□□□□ -0.41
GFM1-207ENST00000478254 KLHDC7AQ5VTJ3 777 aa12.52□□□□□ -0.41
GFM1-207ENST00000478254 SPDYE1Q8NFV5 336 aaPredicted RBP12.52□□□□□ -0.41
GFM1-207ENST00000478254 LRRC45Q96CN5 670 aa12.52□□□□□ -0.41
GFM1-207ENST00000478254 SAAL1Q96ER3 474 aa12.52□□□□□ -0.41
GFM1-207ENST00000478254 RNF26Q9BY78 433 aaPredicted RBP12.52□□□□□ -0.41
GFM1-207ENST00000478254 IRAK4Q9NWZ3 460 aa12.52□□□□□ -0.41
GFM1-207ENST00000478254 ARPP21Q9UBL0 812 aaPredicted RBP12.52□□□□□ -0.41
GFM1-207ENST00000478254 ZBTB12Q9Y330 459 aaPredicted RBP12.52□□□□□ -0.41
GFM1-207ENST00000478254 ITSN1Q15811 1721 aa12.51□□□□□ -0.41
GFM1-207ENST00000478254 A8MUI8 341 aa12.51□□□□□ -0.41
GFM1-207ENST00000478254 EVI5O60447 810 aa12.51□□□□□ -0.41
GFM1-207ENST00000478254 UBE3CQ15386 1083 aa12.51□□□□□ -0.41
GFM1-207ENST00000478254 SFMBT2Q5VUG0 894 aa12.51□□□□□ -0.41
GFM1-207ENST00000478254 GDAP1Q8TB36 358 aa12.51□□□□□ -0.41
GFM1-207ENST00000478254 LMBR1Q8WVP7 490 aa12.51□□□□□ -0.41
GFM1-207ENST00000478254 FAXDC2Q96IV6 333 aa12.51□□□□□ -0.41
GFM1-207ENST00000478254 USP17L12C9JPN9 530 aa12.51□□□□□ -0.41
GFM1-207ENST00000478254 USP17L21D6R901 530 aa12.51□□□□□ -0.41
GFM1-207ENST00000478254 TTI1O43156 1089 aa12.51□□□□□ -0.41
GFM1-207ENST00000478254 TRIM37O94972 964 aa12.51□□□□□ -0.41
GFM1-207ENST00000478254 PCCAP05165 728 aaPredicted RBP12.51□□□□□ -0.41
GFM1-207ENST00000478254 ERVK-9P63128 1117 aa12.51□□□□□ -0.41
GFM1-207ENST00000478254 ATP2C1P98194 919 aaPredicted RBP12.51□□□□□ -0.41
GFM1-207ENST00000478254 CRYMQ14894 314 aa12.51□□□□□ -0.41
GFM1-207ENST00000478254 PKN1Q16512 942 aa12.51□□□□□ -0.41
GFM1-207ENST00000478254 SPICE1Q8N0Z3 855 aa12.51□□□□□ -0.41
GFM1-207ENST00000478254 CUL5Q93034 780 aa12.51□□□□□ -0.41
GFM1-207ENST00000478254 KLHL29Q96CT2 875 aa12.51□□□□□ -0.41
GFM1-207ENST00000478254 MRRFQ96E11 262 aaKnown RBP12.51□□□□□ -0.41
GFM1-207ENST00000478254 THAP9Q9H5L6 903 aa12.51□□□□□ -0.41
GFM1-207ENST00000478254 G3BP2Q9UN86 482 aaKnown RBP12.51□□□□□ -0.41
GFM1-207ENST00000478254 OVOS2A0A0G2JMS6 1433 aa12.51□□□□□ -0.41
GFM1-207ENST00000478254 PDS5AQ29RF7 1337 aaKnown RBP12.51□□□□□ -0.41
GFM1-207ENST00000478254 ITGA4P13612 1032 aa12.5□□□□□ -0.41
GFM1-207ENST00000478254 SLC5A1P13866 664 aa12.5□□□□□ -0.41
GFM1-207ENST00000478254 SRBD1Q8N5C6 995 aaKnown RBP12.5□□□□□ -0.41
GFM1-207ENST00000478254 TAF1DQ9H5J8 278 aaPredicted RBP12.5□□□□□ -0.41
GFM1-207ENST00000478254 INTS9Q9NV88 658 aaKnown RBP12.5□□□□□ -0.41
GFM1-207ENST00000478254 STK36Q9NRP7 1315 aa12.5□□□□□ -0.41
GFM1-207ENST00000478254 SART1O43290 800 aaKnown RBP12.5□□□□□ -0.41
GFM1-207ENST00000478254 SMIM24O75264 130 aa12.5□□□□□ -0.41
GFM1-207ENST00000478254 SCG2P13521 617 aa12.5□□□□□ -0.41
GFM1-207ENST00000478254 CCNE1P24864 410 aa12.5□□□□□ -0.41
GFM1-207ENST00000478254 PRMT1Q99873 361 aaKnown RBP12.5□□□□□ -0.41
GFM1-207ENST00000478254 DUSP9Q99956 384 aaKnown RBP12.5□□□□□ -0.41
GFM1-207ENST00000478254 PHF20Q9BVI0 1012 aa12.5□□□□□ -0.41
GFM1-207ENST00000478254 PANK4Q9NVE7 773 aa12.5□□□□□ -0.41
GFM1-207ENST00000478254 MAGEB6P1A0A0J9YX57 407 aa12.5□□□□□ -0.41
GFM1-207ENST00000478254 A0A1W2PQC6 194 aa12.5□□□□□ -0.41
GFM1-207ENST00000478254 KCNJ2P63252 427 aa12.5□□□□□ -0.41
GFM1-207ENST00000478254 ELF3P78545 371 aaPredicted RBP12.5□□□□□ -0.41
GFM1-207ENST00000478254 ZNF211Q13398 564 aaPredicted RBP12.5□□□□□ -0.41
GFM1-207ENST00000478254 VWA3BQ502W6 1294 aa12.5□□□□□ -0.41
GFM1-207ENST00000478254 KRT28Q7Z3Y7 464 aa12.5□□□□□ -0.41
GFM1-207ENST00000478254 PEX26Q7Z412 305 aa12.5□□□□□ -0.41
GFM1-207ENST00000478254 FBXL16Q8N461 479 aa12.5□□□□□ -0.41
GFM1-207ENST00000478254 ZNF507Q8TCN5 953 aa12.5□□□□□ -0.41
GFM1-207ENST00000478254 TMBIM4Q9HC24 238 aa12.5□□□□□ -0.41
GFM1-207ENST00000478254 RGS16O15492 202 aaPredicted RBP12.49□□□□□ -0.41
GFM1-207ENST00000478254 CHN1P15882 459 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 116.8 ms