RNA–Protein interactions for RNA: ENST00000478251.1

GFM1-206, Transcript of G elongation factor mitochondrial 1, human

TSL 2

Gene GFM1, Length 2,040 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GFM1-206	ENST00000478251	GCFC2	P16383	781 aa	Known RBP	12.84	□□□□□ -0.35
GFM1-206	ENST00000478251	EIF2AK2	P19525	551 aa	Known RBP	12.84	□□□□□ -0.35
GFM1-206	ENST00000478251	CNTN2	Q02246	1040 aa		12.84	□□□□□ -0.35
GFM1-206	ENST00000478251	SPIRE1	Q08AE8	756 aa		12.84	□□□□□ -0.35
GFM1-206	ENST00000478251	E2F4	Q16254	413 aa		12.84	□□□□□ -0.35
GFM1-206	ENST00000478251		Q4G0T1	1027 aa		12.84	□□□□□ -0.35
GFM1-206	ENST00000478251	RGMB	Q6NW40	437 aa		12.84	□□□□□ -0.35
GFM1-206	ENST00000478251	DTHD1	Q6ZMT9	781 aa		12.84	□□□□□ -0.35
GFM1-206	ENST00000478251	TEX2	Q8IWB9	1127 aa		12.84	□□□□□ -0.35
GFM1-206	ENST00000478251	SMC1B	Q8NDV3	1235 aa		12.84	□□□□□ -0.35
GFM1-206	ENST00000478251	PORCN	Q9H237	461 aa		12.84	□□□□□ -0.35
GFM1-206	ENST00000478251	TESPA1	A2RU30	521 aa	Predicted RBP	12.83	□□□□□ -0.36
GFM1-206	ENST00000478251	POLR2D	O15514	142 aa	Known RBP	12.83	□□□□□ -0.36
GFM1-206	ENST00000478251	ACTN4	O43707	911 aa	Known RBP	12.83	□□□□□ -0.36
GFM1-206	ENST00000478251	SLC10A3	P09131	477 aa		12.83	□□□□□ -0.36
GFM1-206	ENST00000478251	ERCC3	P19447	782 aa		12.83	□□□□□ -0.36
GFM1-206	ENST00000478251	LONP1	P36776	959 aa	Known RBP	12.83	□□□□□ -0.36
GFM1-206	ENST00000478251	KARS	Q15046	597 aa	Known RBP	12.83	□□□□□ -0.36
GFM1-206	ENST00000478251	PGM5	Q15124	567 aa		12.83	□□□□□ -0.36
GFM1-206	ENST00000478251	MCTP2	Q6DN12	878 aa		12.83	□□□□□ -0.36
GFM1-206	ENST00000478251	ANKRD23	Q86SG2	305 aa		12.83	□□□□□ -0.36
GFM1-206	ENST00000478251	GRAMD1C	Q8IYS0	662 aa		12.83	□□□□□ -0.36
GFM1-206	ENST00000478251	PDCD2L	Q9BRP1	358 aa		12.83	□□□□□ -0.36
GFM1-206	ENST00000478251	TTC12	Q9H892	705 aa	Predicted RBP	12.83	□□□□□ -0.36
GFM1-206	ENST00000478251	PXMP2	Q9NR77	195 aa		12.83	□□□□□ -0.36
GFM1-206	ENST00000478251	AR	P10275	920 aa		12.83	□□□□□ -0.36
GFM1-206	ENST00000478251	OSBP	P22059	807 aa		12.83	□□□□□ -0.36
GFM1-206	ENST00000478251	FXR2	P51116	673 aa	Known RBP eCLIP	12.83	□□□□□ -0.36
GFM1-206	ENST00000478251	ERVK-9	P63128	1117 aa		12.83	□□□□□ -0.36
GFM1-206	ENST00000478251	ERVK-24	P63145	666 aa		12.83	□□□□□ -0.36
GFM1-206	ENST00000478251	NAALADL2	Q58DX5	795 aa		12.83	□□□□□ -0.36
GFM1-206	ENST00000478251	ANKRD13C	Q8N6S4	541 aa		12.83	□□□□□ -0.36
GFM1-206	ENST00000478251	FGD4	Q96M96	766 aa		12.83	□□□□□ -0.36
GFM1-206	ENST00000478251	RMDN3	Q96TC7	470 aa		12.83	□□□□□ -0.36
GFM1-206	ENST00000478251	MTR	Q99707	1265 aa		12.83	□□□□□ -0.36
GFM1-206	ENST00000478251	TNMD	Q9H2S6	317 aa		12.83	□□□□□ -0.36
GFM1-206	ENST00000478251	SERTAD1	Q9UHV2	236 aa		12.83	□□□□□ -0.36
GFM1-206	ENST00000478251	PNMA2	Q9UL42	364 aa		12.83	□□□□□ -0.36
GFM1-206	ENST00000478251	SLC45A1	Q9Y2W3	748 aa		12.83	□□□□□ -0.36
GFM1-206	ENST00000478251	RABGAP1	Q9Y3P9	1069 aa		12.83	□□□□□ -0.36
GFM1-206	ENST00000478251	KIN	O60870	393 aa	Known RBP	12.82	□□□□□ -0.36
GFM1-206	ENST00000478251	RGS20	O76081	388 aa		12.82	□□□□□ -0.36
GFM1-206	ENST00000478251	PRR29	P0C7W0	189 aa		12.82	□□□□□ -0.36
GFM1-206	ENST00000478251	MDM2	Q00987	491 aa	Predicted RBP	12.82	□□□□□ -0.36
GFM1-206	ENST00000478251	PABPC4	Q13310	644 aa	Known RBP eCLIP	12.82	□□□□□ -0.36
GFM1-206	ENST00000478251	GSE1	Q14687	1217 aa		12.82	□□□□□ -0.36
GFM1-206	ENST00000478251	TKFC	Q3LXA3	575 aa		12.82	□□□□□ -0.36
GFM1-206	ENST00000478251	CEP55	Q53EZ4	464 aa		12.82	□□□□□ -0.36
GFM1-206	ENST00000478251	KRBA2	Q6ZNG9	492 aa		12.82	□□□□□ -0.36
GFM1-206	ENST00000478251	NCAPG2	Q86XI2	1143 aa		12.82	□□□□□ -0.36
GFM1-206	ENST00000478251	ZNF784	Q8NCA9	323 aa	Predicted RBP	12.82	□□□□□ -0.36
GFM1-206	ENST00000478251	CHST13	Q8NET6	341 aa		12.82	□□□□□ -0.36
GFM1-206	ENST00000478251	SYAP1	Q96A49	352 aa	Predicted RBP	12.82	□□□□□ -0.36
GFM1-206	ENST00000478251	WDR11	Q9BZH6	1224 aa		12.82	□□□□□ -0.36
GFM1-206	ENST00000478251	EFCC1	Q9HA90	598 aa		12.82	□□□□□ -0.36
GFM1-206	ENST00000478251	MAP3K20	Q9NYL2	800 aa	Known RBP	12.82	□□□□□ -0.36
GFM1-206	ENST00000478251	ADGRA2	Q96PE1	1338 aa		12.81	□□□□□ -0.36
GFM1-206	ENST00000478251	ZSWIM8	A7E2V4	1837 aa		12.81	□□□□□ -0.36
GFM1-206	ENST00000478251	MEIS1	O00470	390 aa		12.81	□□□□□ -0.36
GFM1-206	ENST00000478251	TOMM70	O94826	608 aa		12.81	□□□□□ -0.36
GFM1-206	ENST00000478251	CASP1	P29466	404 aa		12.81	□□□□□ -0.36
GFM1-206	ENST00000478251	ECM1	Q16610	540 aa		12.81	□□□□□ -0.36
GFM1-206	ENST00000478251	PCNX4	Q63HM2	1172 aa		12.81	□□□□□ -0.36
GFM1-206	ENST00000478251	DHX58	Q96C10	678 aa		12.81	□□□□□ -0.36
GFM1-206	ENST00000478251	PLIN2	Q99541	437 aa		12.81	□□□□□ -0.36
GFM1-206	ENST00000478251	VAV3	Q9UKW4	847 aa		12.81	□□□□□ -0.36
GFM1-206	ENST00000478251	FSD2	A1L4K1	749 aa		12.81	□□□□□ -0.36
GFM1-206	ENST00000478251	SEMA3F	Q13275	785 aa		12.81	□□□□□ -0.36
GFM1-206	ENST00000478251	PNOC	Q13519	176 aa		12.81	□□□□□ -0.36
GFM1-206	ENST00000478251	PDXDC2P	Q6P474	469 aa		12.81	□□□□□ -0.36
GFM1-206	ENST00000478251	LRSAM1	Q6UWE0	723 aa		12.81	□□□□□ -0.36
GFM1-206	ENST00000478251	SAMD3	Q8N6K7	520 aa		12.81	□□□□□ -0.36
GFM1-206	ENST00000478251	SMCR8	Q8TEV9	937 aa	Predicted RBP	12.81	□□□□□ -0.36
GFM1-206	ENST00000478251	CCSER1	Q9C0I3	900 aa		12.81	□□□□□ -0.36
GFM1-206	ENST00000478251	FAM13B	Q9NYF5	915 aa		12.81	□□□□□ -0.36
GFM1-206	ENST00000478251	UBIAD1	Q9Y5Z9	338 aa		12.81	□□□□□ -0.36
GFM1-206	ENST00000478251	HTT	P42858	3142 aa		12.81	□□□□□ -0.36
GFM1-206	ENST00000478251	SOWAHB	A6NEL2	793 aa		12.8	□□□□□ -0.36
GFM1-206	ENST00000478251	PGK2	P07205	417 aa		12.8	□□□□□ -0.36
GFM1-206	ENST00000478251	PLA2G4D	Q86XP0	818 aa		12.8	□□□□□ -0.36
GFM1-206	ENST00000478251	STAM	Q92783	540 aa		12.8	□□□□□ -0.36
GFM1-206	ENST00000478251	TIGD1	Q96MW7	591 aa		12.8	□□□□□ -0.36
GFM1-206	ENST00000478251	PNMA5	Q96PV4	448 aa		12.8	□□□□□ -0.36
GFM1-206	ENST00000478251	MXRA8	Q9BRK3	442 aa		12.8	□□□□□ -0.36
GFM1-206	ENST00000478251	DISC1	Q9NRI5	854 aa		12.8	□□□□□ -0.36
GFM1-206	ENST00000478251	PNMA3	Q9UL41	463 aa		12.8	□□□□□ -0.36
GFM1-206	ENST00000478251	ABT1	Q9ULW3	272 aa	Known RBP	12.8	□□□□□ -0.36
GFM1-206	ENST00000478251	TMEM88B	A6NKF7	163 aa		12.79	□□□□□ -0.36
GFM1-206	ENST00000478251	EML1	O00423	815 aa		12.79	□□□□□ -0.36
GFM1-206	ENST00000478251	NR3C2	P08235	984 aa		12.79	□□□□□ -0.36
GFM1-206	ENST00000478251	MYCL	P12524	364 aa	Predicted RBP	12.79	□□□□□ -0.36
GFM1-206	ENST00000478251	ZNF76	P36508	570 aa		12.79	□□□□□ -0.36
GFM1-206	ENST00000478251	GRB10	Q13322	594 aa		12.79	□□□□□ -0.36
GFM1-206	ENST00000478251	ITGB3BP	Q13352	177 aa	Predicted RBP	12.79	□□□□□ -0.36
GFM1-206	ENST00000478251	ARHGEF16	Q5VV41	709 aa		12.79	□□□□□ -0.36
GFM1-206	ENST00000478251	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	12.79	□□□□□ -0.36
GFM1-206	ENST00000478251	KCNK18	Q7Z418	384 aa		12.79	□□□□□ -0.36
GFM1-206	ENST00000478251	SH3RF1	Q7Z6J0	888 aa		12.79	□□□□□ -0.36
GFM1-206	ENST00000478251	VSIG10L	Q86VR7	867 aa		12.79	□□□□□ -0.36
GFM1-206	ENST00000478251	ANKRD35	Q8N283	1001 aa		12.79	□□□□□ -0.36

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