RNA–Protein interactions for RNA: ENST00000478111.5

TRIM13-208, Transcript of tripartite motif containing 13, humanhuman

TSL 2

Gene TRIM13, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-208ENST00000478111 DDX41Q9UJV9 622 aaKnown RBP19.49■□□□□ 0.71
TRIM13-208ENST00000478111 IGFBP4P22692 258 aa19.48■□□□□ 0.71
TRIM13-208ENST00000478111 HSD17B4P51659 736 aa19.48■□□□□ 0.71
TRIM13-208ENST00000478111 GPNMBQ14956 572 aa19.48■□□□□ 0.71
TRIM13-208ENST00000478111 CCDC85BQ15834 202 aaPredicted RBP19.48■□□□□ 0.71
TRIM13-208ENST00000478111 SLC35G1Q2M3R5 365 aa19.48■□□□□ 0.71
TRIM13-208ENST00000478111 PPP2R2DQ66LE6 453 aa19.48■□□□□ 0.71
TRIM13-208ENST00000478111 GDF6Q6KF10 455 aaPredicted RBP19.48■□□□□ 0.71
TRIM13-208ENST00000478111 SESTD1Q86VW0 696 aa19.48■□□□□ 0.71
TRIM13-208ENST00000478111 UBAC1Q9BSL1 405 aa19.48■□□□□ 0.71
TRIM13-208ENST00000478111 PXMP2Q9NR77 195 aa19.48■□□□□ 0.71
TRIM13-208ENST00000478111 MAD2L2Q9UI95 211 aa19.48■□□□□ 0.71
TRIM13-208ENST00000478111 DHX16O60231 1041 aaKnown RBP19.47■□□□□ 0.71
TRIM13-208ENST00000478111 EIF3JO75822 258 aaKnown RBP19.47■□□□□ 0.71
TRIM13-208ENST00000478111 CFBP00751 764 aa19.47■□□□□ 0.71
TRIM13-208ENST00000478111 NR3C2P08235 984 aa19.47■□□□□ 0.71
TRIM13-208ENST00000478111 GSPT1P15170 499 aaKnown RBP19.47■□□□□ 0.71
TRIM13-208ENST00000478111 EIF2AK2P19525 551 aaKnown RBP19.47■□□□□ 0.71
TRIM13-208ENST00000478111 BFSP2Q13515 415 aa19.47■□□□□ 0.71
TRIM13-208ENST00000478111 PTGISQ16647 500 aa19.47■□□□□ 0.71
TRIM13-208ENST00000478111 IFIT1BQ5T764 474 aaKnown RBP19.47■□□□□ 0.71
TRIM13-208ENST00000478111 ARHGEF16Q5VV41 709 aa19.47■□□□□ 0.71
TRIM13-208ENST00000478111 CHST3Q7LGC8 479 aa19.47■□□□□ 0.71
TRIM13-208ENST00000478111 RETREG2Q8NC44 543 aa19.47■□□□□ 0.71
TRIM13-208ENST00000478111 ATXN2LQ8WWM7 1075 aaKnown RBP19.47■□□□□ 0.71
TRIM13-208ENST00000478111 EMID1Q96A84 441 aaPredicted RBP19.47■□□□□ 0.71
TRIM13-208ENST00000478111 AMNQ9BXJ7 453 aa19.47■□□□□ 0.71
TRIM13-208ENST00000478111 PALM3A6NDB9 673 aaPredicted RBP19.46■□□□□ 0.71
TRIM13-208ENST00000478111 KLRF2D3W0D1 207 aa19.46■□□□□ 0.71
TRIM13-208ENST00000478111 RGS20O76081 388 aa19.46■□□□□ 0.71
TRIM13-208ENST00000478111 ACTN1P12814 892 aa19.46■□□□□ 0.71
TRIM13-208ENST00000478111 CHMP4BP1P59074 171 aa19.46■□□□□ 0.71
TRIM13-208ENST00000478111 TMEM67Q5HYA8 995 aa19.46■□□□□ 0.71
TRIM13-208ENST00000478111 DHX38Q92620 1227 aaKnown RBP19.46■□□□□ 0.71
TRIM13-208ENST00000478111 THEGQ9P2T0 379 aa19.46■□□□□ 0.71
TRIM13-208ENST00000478111 ARHGEF15O94989 841 aa19.45■□□□□ 0.7
TRIM13-208ENST00000478111 CA3P07451 260 aa19.45■□□□□ 0.7
TRIM13-208ENST00000478111 CASTP20810 708 aaKnown RBP19.45■□□□□ 0.7
TRIM13-208ENST00000478111 TTC22Q5TAA0 569 aa19.45■□□□□ 0.7
TRIM13-208ENST00000478111 STOX1Q6ZVD7 989 aa19.45■□□□□ 0.7
TRIM13-208ENST00000478111 PHOSPHO2Q8TCD6 241 aa19.45■□□□□ 0.7
TRIM13-208ENST00000478111 SLC9A7Q96T83 725 aa19.45■□□□□ 0.7
TRIM13-208ENST00000478111 PDCD2LQ9BRP1 358 aa19.45■□□□□ 0.7
TRIM13-208ENST00000478111 NOD1Q9Y239 953 aa19.45■□□□□ 0.7
TRIM13-208ENST00000478111 TCF20Q9UGU0 1960 aaKnown RBP19.44■□□□□ 0.7
TRIM13-208ENST00000478111 HAS3O00219 553 aa19.44■□□□□ 0.7
TRIM13-208ENST00000478111 RFXAPO00287 272 aa19.44■□□□□ 0.7
TRIM13-208ENST00000478111 ZBTB5O15062 677 aa19.44■□□□□ 0.7
TRIM13-208ENST00000478111 CYP21A2P08686 494 aa19.44■□□□□ 0.7
TRIM13-208ENST00000478111 PTH1RQ03431 593 aa19.44■□□□□ 0.7
TRIM13-208ENST00000478111 RBL2Q08999 1139 aa19.44■□□□□ 0.7
TRIM13-208ENST00000478111 DGKDQ16760 1214 aa19.44■□□□□ 0.7
TRIM13-208ENST00000478111 CAGE1Q8TC20 777 aa19.44■□□□□ 0.7
TRIM13-208ENST00000478111 AFAP1L1Q8TED9 768 aa19.44■□□□□ 0.7
TRIM13-208ENST00000478111 ASB2Q96Q27 587 aa19.44■□□□□ 0.7
TRIM13-208ENST00000478111 FTOQ9C0B1 505 aaKnown RBP eCLIP19.44■□□□□ 0.79e-12■■■■□ 25.2
TRIM13-208ENST00000478111 SENP2Q9HC62 589 aa19.44■□□□□ 0.7
TRIM13-208ENST00000478111 MAP3K20Q9NYL2 800 aaKnown RBP19.44■□□□□ 0.7
TRIM13-208ENST00000478111 HDAC6Q9UBN7 1215 aa19.44■□□□□ 0.7
TRIM13-208ENST00000478111 GTF2IRD1Q9UHL9 959 aa19.44■□□□□ 0.7
TRIM13-208ENST00000478111 TAF6LQ9Y6J9 622 aa19.44■□□□□ 0.7
TRIM13-208ENST00000478111 EPOPA6NHQ4 379 aa19.43■□□□□ 0.7
TRIM13-208ENST00000478111 RBAK-RBAKDNI3L0D1 243 aa19.43■□□□□ 0.7
TRIM13-208ENST00000478111 HOXD8P13378 290 aaPredicted RBP19.43■□□□□ 0.7
TRIM13-208ENST00000478111 POU3F3P20264 500 aaPredicted RBP19.43■□□□□ 0.7
TRIM13-208ENST00000478111 PSEN2P49810 448 aa19.43■□□□□ 0.7
TRIM13-208ENST00000478111 LAMC2Q13753 1193 aa19.43■□□□□ 0.7
TRIM13-208ENST00000478111 VSIG10LQ86VR7 867 aa19.43■□□□□ 0.7
TRIM13-208ENST00000478111 HERC6Q8IVU3 1022 aa19.43■□□□□ 0.7
TRIM13-208ENST00000478111 IL31RAQ8NI17 732 aa19.43■□□□□ 0.7
TRIM13-208ENST00000478111 RIOX1Q9H6W3 641 aa19.43■□□□□ 0.7
TRIM13-208ENST00000478111 PCDHA1Q9Y5I3 950 aa19.43■□□□□ 0.7
TRIM13-208ENST00000478111 MRVI1Q9Y6F6 885 aa19.43■□□□□ 0.7
TRIM13-208ENST00000478111 CYTH3O43739 400 aa19.42■□□□□ 0.7
TRIM13-208ENST00000478111 BAIAP3O94812 1187 aa19.42■□□□□ 0.7
TRIM13-208ENST00000478111 F2P00734 622 aa19.42■□□□□ 0.7
TRIM13-208ENST00000478111 HOXA13P31271 388 aaPredicted RBP19.42■□□□□ 0.7
TRIM13-208ENST00000478111 SP2Q02086 613 aa19.42■□□□□ 0.7
TRIM13-208ENST00000478111 TAP1Q03518 808 aa19.42■□□□□ 0.7
TRIM13-208ENST00000478111 GRM4Q14833 912 aa19.42■□□□□ 0.7
TRIM13-208ENST00000478111 MYSM1Q5VVJ2 828 aa19.42■□□□□ 0.7
TRIM13-208ENST00000478111 DHX37Q8IY37 1157 aaKnown RBP19.42■□□□□ 0.7
TRIM13-208ENST00000478111 CCDC155Q8N6L0 562 aa19.42■□□□□ 0.7
TRIM13-208ENST00000478111 PPTC7Q8NI37 304 aa19.42■□□□□ 0.7
TRIM13-208ENST00000478111 PIGSQ96S52 555 aa19.42■□□□□ 0.7
TRIM13-208ENST00000478111 CERS4Q9HA82 394 aa19.42■□□□□ 0.7
TRIM13-208ENST00000478111 DOCK5Q9H7D0 1870 aa19.41■□□□□ 0.7
TRIM13-208ENST00000478111 BRWD1Q9NSI6 2320 aa19.41■□□□□ 0.7
TRIM13-208ENST00000478111 TNFRSF10AO00220 468 aa19.41■□□□□ 0.7
TRIM13-208ENST00000478111 NBNO60934 754 aa19.41■□□□□ 0.7
TRIM13-208ENST00000478111 CXCL10P02778 98 aa19.41■□□□□ 0.7
TRIM13-208ENST00000478111 ZNF286BP0CG31 522 aa19.41■□□□□ 0.7
TRIM13-208ENST00000478111 CKBP12277 381 aa19.41■□□□□ 0.7
TRIM13-208ENST00000478111 MYCLP12524 364 aaPredicted RBP19.41■□□□□ 0.7
TRIM13-208ENST00000478111 SELPP16109 830 aa19.41■□□□□ 0.7
TRIM13-208ENST00000478111 CHMLP26374 656 aa19.41■□□□□ 0.7
TRIM13-208ENST00000478111 MRPS5P82675 430 aaKnown RBP19.41■□□□□ 0.7
TRIM13-208ENST00000478111 TROAPQ12815 778 aa19.41■□□□□ 0.7
TRIM13-208ENST00000478111 HIC1Q14526 733 aa19.41■□□□□ 0.7
TRIM13-208ENST00000478111 PGM5Q15124 567 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms