RNA–Protein interactions for RNA: ENST00000477888.1

SPTLC1-205, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 359 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-205ENST00000477888 ICAM3P32942 547 aa8.75□□□□□ -1.01
SPTLC1-205ENST00000477888 RRP1P56182 461 aaKnown RBP8.75□□□□□ -1.01
SPTLC1-205ENST00000477888 CHMP4BP1P59074 171 aa8.75□□□□□ -1.01
SPTLC1-205ENST00000477888 COASYQ13057 564 aa8.75□□□□□ -1.01
SPTLC1-205ENST00000477888 CAMK1Q14012 370 aa8.75□□□□□ -1.01
SPTLC1-205ENST00000477888 BAATQ14032 418 aaPredicted RBP8.75□□□□□ -1.01
SPTLC1-205ENST00000477888 ZNF618Q5T7W0 954 aa8.75□□□□□ -1.01
SPTLC1-205ENST00000477888 SLFN13Q68D06 897 aa8.75□□□□□ -1.01
SPTLC1-205ENST00000477888 NSMFQ6X4W1 530 aa8.75□□□□□ -1.01
SPTLC1-205ENST00000477888 SMRP1Q8NCR6 262 aa8.75□□□□□ -1.01
SPTLC1-205ENST00000477888 CHURC1Q8WUH1 139 aa8.75□□□□□ -1.01
SPTLC1-205ENST00000477888 STAG1Q8WVM7 1258 aa8.75□□□□□ -1.01
SPTLC1-205ENST00000477888 WNT8BQ93098 351 aa8.75□□□□□ -1.01
SPTLC1-205ENST00000477888 RMDN1Q96DB5 314 aa8.75□□□□□ -1.01
SPTLC1-205ENST00000477888 RIPOR3Q96MK2 946 aa8.75□□□□□ -1.01
SPTLC1-205ENST00000477888 LMAN2LQ9H0V9 348 aa8.75□□□□□ -1.01
SPTLC1-205ENST00000477888 IGFLR1Q9H665 355 aa8.75□□□□□ -1.01
SPTLC1-205ENST00000477888 MTMR4Q9NYA4 1195 aa8.75□□□□□ -1.01
SPTLC1-205ENST00000477888 ADD3Q9UEY8 706 aaKnown RBP8.75□□□□□ -1.01
SPTLC1-205ENST00000477888 GTF2IRD1Q9UHL9 959 aa8.75□□□□□ -1.01
SPTLC1-205ENST00000477888 MCM3APO60318 1980 aa8.75□□□□□ -1.01
SPTLC1-205ENST00000477888 SCN10AQ9Y5Y9 1956 aa8.75□□□□□ -1.01
SPTLC1-205ENST00000477888 NCOR2Q9Y618 2525 aa8.75□□□□□ -1.01
SPTLC1-205ENST00000477888 MYO5AQ9Y4I1 1855 aaKnown RBP8.74□□□□□ -1.01
SPTLC1-205ENST00000477888 PTPRSQ13332 1948 aa8.74□□□□□ -1.01
SPTLC1-205ENST00000477888 KMT2BQ9UMN6 2715 aaPredicted RBP8.74□□□□□ -1.01
SPTLC1-205ENST00000477888 GOLIM4O00461 696 aa8.74□□□□□ -1.01
SPTLC1-205ENST00000477888 PLA2G6O60733 806 aa8.74□□□□□ -1.01
SPTLC1-205ENST00000477888 KDM4AO75164 1064 aa8.74□□□□□ -1.01
SPTLC1-205ENST00000477888 TXNP10599 105 aaKnown RBP8.74□□□□□ -1.01
SPTLC1-205ENST00000477888 ADD2P35612 726 aa8.74□□□□□ -1.01
SPTLC1-205ENST00000477888 BMPR1AP36894 532 aa8.74□□□□□ -1.01
SPTLC1-205ENST00000477888 STAT2P52630 851 aa8.74□□□□□ -1.01
SPTLC1-205ENST00000477888 RARSP54136 660 aaKnown RBP8.74□□□□□ -1.01
SPTLC1-205ENST00000477888 PTK7Q13308 1070 aa8.74□□□□□ -1.01
SPTLC1-205ENST00000477888 PPP2R5BQ15173 497 aa8.74□□□□□ -1.01
SPTLC1-205ENST00000477888 TMEM132AQ24JP5 1023 aa8.74□□□□□ -1.01
SPTLC1-205ENST00000477888 PLEKHG4Q58EX7 1191 aa8.74□□□□□ -1.01
SPTLC1-205ENST00000477888 FRMD5Q7Z6J6 570 aa8.74□□□□□ -1.01
SPTLC1-205ENST00000477888 FAM160B2Q86V87 743 aa8.74□□□□□ -1.01
SPTLC1-205ENST00000477888 FAM9BQ8IZU0 186 aa8.74□□□□□ -1.01
SPTLC1-205ENST00000477888 SCFD2Q8WU76 684 aa8.74□□□□□ -1.01
SPTLC1-205ENST00000477888 CEP95Q96GE4 821 aa8.74□□□□□ -1.01
SPTLC1-205ENST00000477888 CNTNAP3BQ96NU0 1288 aa8.74□□□□□ -1.01
SPTLC1-205ENST00000477888 YME1L1Q96TA2 773 aa8.74□□□□□ -1.01
SPTLC1-205ENST00000477888 CNTNAP3Q9BZ76 1288 aa8.74□□□□□ -1.01
SPTLC1-205ENST00000477888 MKNK2Q9HBH9 465 aa8.74□□□□□ -1.01
SPTLC1-205ENST00000477888 HDAC6Q9UBN7 1215 aa8.74□□□□□ -1.01
SPTLC1-205ENST00000477888 PLXNA3P51805 1871 aa8.73□□□□□ -1.01
SPTLC1-205ENST00000477888 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.73□□□□□ -1.01
SPTLC1-205ENST00000477888 UPP2O95045 317 aa8.73□□□□□ -1.01
SPTLC1-205ENST00000477888 ARIH2O95376 493 aa8.73□□□□□ -1.01
SPTLC1-205ENST00000477888 TTLL1O95922 423 aa8.73□□□□□ -1.01
SPTLC1-205ENST00000477888 CHGBP05060 677 aa8.73□□□□□ -1.01
SPTLC1-205ENST00000477888 TRIM27P14373 513 aa8.73□□□□□ -1.01
SPTLC1-205ENST00000477888 EDNRBP24530 442 aa8.73□□□□□ -1.01
SPTLC1-205ENST00000477888 SNAP25P60880 206 aa8.73□□□□□ -1.01
SPTLC1-205ENST00000477888 SBK1Q52WX2 424 aa8.73□□□□□ -1.01
SPTLC1-205ENST00000477888 CCDC62Q6P9F0 684 aa8.73□□□□□ -1.01
SPTLC1-205ENST00000477888 DGLUCYQ7Z3D6 616 aa8.73□□□□□ -1.01
SPTLC1-205ENST00000477888 AACSQ86V21 672 aa8.73□□□□□ -1.01
SPTLC1-205ENST00000477888 TMEM105Q8N8V8 129 aa8.73□□□□□ -1.01
SPTLC1-205ENST00000477888 AFG1LQ8WV93 481 aa8.73□□□□□ -1.01
SPTLC1-205ENST00000477888 DDRGK1Q96HY6 314 aa8.73□□□□□ -1.01
SPTLC1-205ENST00000477888 GMCL1Q96IK5 515 aa8.73□□□□□ -1.01
SPTLC1-205ENST00000477888 C11orf84Q9BUA3 381 aaPredicted RBP8.73□□□□□ -1.01
SPTLC1-205ENST00000477888 PHF7Q9BWX1 381 aaPredicted RBP8.73□□□□□ -1.01
SPTLC1-205ENST00000477888 ARPP21Q9UBL0 812 aaPredicted RBP8.73□□□□□ -1.01
SPTLC1-205ENST00000477888 TNNQ9UQP3 1299 aa8.73□□□□□ -1.01
SPTLC1-205ENST00000477888 SLC4A4Q9Y6R1 1079 aa8.73□□□□□ -1.01
SPTLC1-205ENST00000477888 EMSYQ7Z589 1322 aa8.73□□□□□ -1.01
SPTLC1-205ENST00000477888 SIP14410 1827 aa8.73□□□□□ -1.01
SPTLC1-205ENST00000477888 DMXL1Q9Y485 3027 aa8.72□□□□□ -1.01
SPTLC1-205ENST00000477888 MYO7AQ13402 2215 aa8.72□□□□□ -1.01
SPTLC1-205ENST00000477888 NFIBO00712 420 aa8.72□□□□□ -1.01
SPTLC1-205ENST00000477888 MMP3P08254 477 aa8.72□□□□□ -1.01
SPTLC1-205ENST00000477888 MCCP23508 829 aa8.72□□□□□ -1.01
SPTLC1-205ENST00000477888 CTNNB1P35222 781 aa8.72□□□□□ -1.01
SPTLC1-205ENST00000477888 NDUFV1P49821 464 aa8.72□□□□□ -1.01
SPTLC1-205ENST00000477888 ZNF200P98182 395 aaPredicted RBP8.72□□□□□ -1.01
SPTLC1-205ENST00000477888 HIC1Q14526 733 aa8.72□□□□□ -1.01
SPTLC1-205ENST00000477888 UBE3CQ15386 1083 aa8.72□□□□□ -1.01
SPTLC1-205ENST00000477888 PTPN21Q16825 1174 aa8.72□□□□□ -1.01
SPTLC1-205ENST00000477888 MCTP2Q6DN12 878 aa8.72□□□□□ -1.01
SPTLC1-205ENST00000477888 C7orf31Q8N865 590 aa8.72□□□□□ -1.01
SPTLC1-205ENST00000477888 CLP1Q92989 425 aaKnown RBP8.72□□□□□ -1.01
SPTLC1-205ENST00000477888 IL17RAQ96F46 866 aa8.72□□□□□ -1.01
SPTLC1-205ENST00000477888 RPGRIP1Q96KN7 1286 aa8.72□□□□□ -1.01
SPTLC1-205ENST00000477888 DNAJC2Q99543 621 aaKnown RBP8.72□□□□□ -1.01
SPTLC1-205ENST00000477888 INCENPQ9NQS7 918 aa8.72□□□□□ -1.01
SPTLC1-205ENST00000477888 CCPG1Q9ULG6 757 aa8.72□□□□□ -1.01
SPTLC1-205ENST00000477888 PRR12Q9ULL5 1215 aa8.72□□□□□ -1.01
SPTLC1-205ENST00000477888 USP15Q9Y4E8 981 aaPredicted RBP8.72□□□□□ -1.01
SPTLC1-205ENST00000477888 CFAP47Q6ZTR5 3102 aa8.71□□□□□ -1.01
SPTLC1-205ENST00000477888 WDR87Q6ZQQ6 2873 aa8.71□□□□□ -1.01
SPTLC1-205ENST00000477888 TPRP12270 2363 aaKnown RBP8.71□□□□□ -1.01
SPTLC1-205ENST00000477888 KMT2EQ8IZD2 1858 aa8.71□□□□□ -1.01
SPTLC1-205ENST00000477888 NAV1Q8NEY1 1877 aa8.71□□□□□ -1.01
SPTLC1-205ENST00000477888 TANC1Q9C0D5 1861 aa8.71□□□□□ -1.01
SPTLC1-205ENST00000477888 RSPH10B2B2RC85 870 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms