RNA–Protein interactions for RNA: ENST00000477763.1

SMNDC1-205, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 2

Gene SMNDC1, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-205ENST00000477763 PCDHA2Q9Y5H9 948 aa6.72□□□□□ -1.33
SMNDC1-205ENST00000477763 ESYT3A0FGR9 886 aa6.71□□□□□ -1.34
SMNDC1-205ENST00000477763 C22orf46C9J442 243 aa6.71□□□□□ -1.34
SMNDC1-205ENST00000477763 NFIBO00712 420 aa6.71□□□□□ -1.34
SMNDC1-205ENST00000477763 KRT1P04264 644 aa6.71□□□□□ -1.34
SMNDC1-205ENST00000477763 BCL6P41182 706 aa6.71□□□□□ -1.34
SMNDC1-205ENST00000477763 SLC6A11P48066 632 aa6.71□□□□□ -1.34
SMNDC1-205ENST00000477763 DLG4P78352 724 aa6.71□□□□□ -1.34
SMNDC1-205ENST00000477763 SLC9A5Q14940 896 aa6.71□□□□□ -1.34
SMNDC1-205ENST00000477763 FOXB2Q5VYV0 432 aa6.71□□□□□ -1.34
SMNDC1-205ENST00000477763 TMEM132EQ6IEE7 984 aa6.71□□□□□ -1.34
SMNDC1-205ENST00000477763 CEP68Q76N32 757 aa6.71□□□□□ -1.34
SMNDC1-205ENST00000477763 MAMDC2Q7Z304 686 aaPredicted RBP6.71□□□□□ -1.34
SMNDC1-205ENST00000477763 TMC6Q7Z403 805 aa6.71□□□□□ -1.34
SMNDC1-205ENST00000477763 NLRP10Q86W26 655 aa6.71□□□□□ -1.34
SMNDC1-205ENST00000477763 DCP2Q8IU60 420 aaKnown RBP6.71□□□□□ -1.34
SMNDC1-205ENST00000477763 TEX2Q8IWB9 1127 aa6.71□□□□□ -1.34
SMNDC1-205ENST00000477763 KISS1RQ969F8 398 aaPredicted RBP6.71□□□□□ -1.34
SMNDC1-205ENST00000477763 TSPAN17Q96FV3 270 aa6.71□□□□□ -1.34
SMNDC1-205ENST00000477763 TRMT2BQ96GJ1 504 aaKnown RBP6.71□□□□□ -1.34
SMNDC1-205ENST00000477763 TMEM169Q96HH4 297 aa6.71□□□□□ -1.34
SMNDC1-205ENST00000477763 EXOC2Q96KP1 924 aa6.71□□□□□ -1.34
SMNDC1-205ENST00000477763 PHF20Q9BVI0 1012 aa6.71□□□□□ -1.34
SMNDC1-205ENST00000477763 KRTAP4-9Q9BYQ8 210 aa6.71□□□□□ -1.34
SMNDC1-205ENST00000477763 FANCLQ9NW38 375 aa6.71□□□□□ -1.34
SMNDC1-205ENST00000477763 TMEM260Q9NX78 707 aa6.71□□□□□ -1.34
SMNDC1-205ENST00000477763 PTCH2Q9Y6C5 1203 aa6.71□□□□□ -1.34
SMNDC1-205ENST00000477763 ZC3H12DA2A288 527 aaKnown RBP6.7□□□□□ -1.34
SMNDC1-205ENST00000477763 F8W031 263 aaPredicted RBP6.7□□□□□ -1.34
SMNDC1-205ENST00000477763 ETV2O00321 342 aaPredicted RBP6.7□□□□□ -1.34
SMNDC1-205ENST00000477763 ZBTB7AO95365 584 aa6.7□□□□□ -1.34
SMNDC1-205ENST00000477763 NTRK1P04629 796 aa6.7□□□□□ -1.34
SMNDC1-205ENST00000477763 GPR85P60893 370 aa6.7□□□□□ -1.34
SMNDC1-205ENST00000477763 SQSTM1Q13501 440 aa6.7□□□□□ -1.34
SMNDC1-205ENST00000477763 TAF7LQ5H9L4 462 aa6.7□□□□□ -1.34
SMNDC1-205ENST00000477763 FAM209AQ5JX71 171 aa6.7□□□□□ -1.34
SMNDC1-205ENST00000477763 C16orf86Q6ZW13 317 aa6.7□□□□□ -1.34
SMNDC1-205ENST00000477763 SYNPOQ8N3V7 929 aa6.7□□□□□ -1.34
SMNDC1-205ENST00000477763 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.7□□□□□ -1.34
SMNDC1-205ENST00000477763 PTPRN2Q92932 1015 aa6.7□□□□□ -1.34
SMNDC1-205ENST00000477763 CNTD2Q9H8S5 307 aa6.7□□□□□ -1.34
SMNDC1-205ENST00000477763 KANSL2Q9H9L4 492 aa6.7□□□□□ -1.34
SMNDC1-205ENST00000477763 GCM1Q9NP62 436 aa6.7□□□□□ -1.34
SMNDC1-205ENST00000477763 BTG4Q9NY30 223 aa6.7□□□□□ -1.34
SMNDC1-205ENST00000477763 FBXL7Q9UJT9 491 aa6.7□□□□□ -1.34
SMNDC1-205ENST00000477763 DBR1Q9UK59 544 aaKnown RBP6.7□□□□□ -1.34
SMNDC1-205ENST00000477763 MRPS23Q9Y3D9 190 aaKnown RBP6.7□□□□□ -1.34
SMNDC1-205ENST00000477763 FPR2P25090 351 aa6.69□□□□□ -1.34
SMNDC1-205ENST00000477763 RAP1GAPP47736 663 aa6.69□□□□□ -1.34
SMNDC1-205ENST00000477763 PRR5P85299 388 aa6.69□□□□□ -1.34
SMNDC1-205ENST00000477763 TCEA2Q15560 299 aa6.69□□□□□ -1.34
SMNDC1-205ENST00000477763 KIZQ2M2Z5 673 aa6.69□□□□□ -1.34
SMNDC1-205ENST00000477763 EGFLAMQ63HQ2 1017 aa6.69□□□□□ -1.34
SMNDC1-205ENST00000477763 LBX2Q6XYB7 198 aa6.69□□□□□ -1.34
SMNDC1-205ENST00000477763 IFNL3Q8IZI9 196 aa6.69□□□□□ -1.34
SMNDC1-205ENST00000477763 SEC14L1Q92503 715 aa6.69□□□□□ -1.34
SMNDC1-205ENST00000477763 SLKQ9H2G2 1235 aaPredicted RBP6.69□□□□□ -1.34
SMNDC1-205ENST00000477763 CDIP1Q9H305 208 aa6.69□□□□□ -1.34
SMNDC1-205ENST00000477763 CD320Q9NPF0 282 aa6.69□□□□□ -1.34
SMNDC1-205ENST00000477763 COA3Q9Y2R0 106 aaPredicted RBP6.69□□□□□ -1.34
SMNDC1-205ENST00000477763 IRS2Q9Y4H2 1338 aa6.69□□□□□ -1.34
SMNDC1-205ENST00000477763 BLACEA4D250 179 aa6.68□□□□□ -1.34
SMNDC1-205ENST00000477763 TCAF2A6NFQ2 919 aa6.68□□□□□ -1.34
SMNDC1-205ENST00000477763 AQP7O14520 342 aa6.68□□□□□ -1.34
SMNDC1-205ENST00000477763 N4BP3O15049 544 aa6.68□□□□□ -1.34
SMNDC1-205ENST00000477763 C6orf222P0C671 652 aaPredicted RBP6.68□□□□□ -1.34
SMNDC1-205ENST00000477763 C1QTNF9P0C862 333 aa6.68□□□□□ -1.34
SMNDC1-205ENST00000477763 FBLN1P23142 703 aa6.68□□□□□ -1.34
SMNDC1-205ENST00000477763 GABREP78334 506 aa6.68□□□□□ -1.34
SMNDC1-205ENST00000477763 CHRNA2Q15822 529 aa6.68□□□□□ -1.34
SMNDC1-205ENST00000477763 PLEKHG4Q58EX7 1191 aa6.68□□□□□ -1.34
SMNDC1-205ENST00000477763 KCNT2Q6UVM3 1135 aa6.68□□□□□ -1.34
SMNDC1-205ENST00000477763 LDHDQ86WU2 507 aa6.68□□□□□ -1.34
SMNDC1-205ENST00000477763 CHAMP1Q96JM3 812 aa6.68□□□□□ -1.34
SMNDC1-205ENST00000477763 RNF38Q9H0F5 515 aa6.68□□□□□ -1.34
SMNDC1-205ENST00000477763 AP5M1Q9H0R1 490 aa6.68□□□□□ -1.34
SMNDC1-205ENST00000477763 EPB41L1Q9H4G0 881 aa6.68□□□□□ -1.34
SMNDC1-205ENST00000477763 CLDND1Q9NY35 253 aa6.68□□□□□ -1.34
SMNDC1-205ENST00000477763 PCDHA5Q9Y5H7 936 aa6.68□□□□□ -1.34
SMNDC1-205ENST00000477763 DBX1A6NMT0 343 aa6.67□□□□□ -1.34
SMNDC1-205ENST00000477763 MSCO60682 206 aa6.67□□□□□ -1.34
SMNDC1-205ENST00000477763 NAT1P18440 290 aa6.67□□□□□ -1.34
SMNDC1-205ENST00000477763 CDR1P51861 262 aa6.67□□□□□ -1.34
SMNDC1-205ENST00000477763 TARBP2Q15633 366 aaKnown RBP6.67□□□□□ -1.34
SMNDC1-205ENST00000477763 ATG14Q6ZNE5 492 aa6.67□□□□□ -1.34
SMNDC1-205ENST00000477763 MZB1Q8WU39 189 aa6.67□□□□□ -1.34
SMNDC1-205ENST00000477763 HCFC2Q9Y5Z7 792 aa6.67□□□□□ -1.34
SMNDC1-205ENST00000477763 IRS4O14654 1257 aaPredicted RBP6.66□□□□□ -1.34
SMNDC1-205ENST00000477763 DGKIO75912 1065 aa6.66□□□□□ -1.34
SMNDC1-205ENST00000477763 ASMTLO95671 621 aa6.66□□□□□ -1.34
SMNDC1-205ENST00000477763 ZNF200P98182 395 aaPredicted RBP6.66□□□□□ -1.34
SMNDC1-205ENST00000477763 EMC4Q5J8M3 183 aa6.66□□□□□ -1.34
SMNDC1-205ENST00000477763 ANKLE2Q86XL3 938 aa6.66□□□□□ -1.34
SMNDC1-205ENST00000477763 SIGLEC10Q96LC7 697 aa6.66□□□□□ -1.34
SMNDC1-205ENST00000477763 FEZ1Q99689 392 aa6.66□□□□□ -1.34
SMNDC1-205ENST00000477763 SGPP1Q9BX95 441 aa6.66□□□□□ -1.34
SMNDC1-205ENST00000477763 ASXL2Q76L83 1435 aa6.66□□□□□ -1.34
SMNDC1-205ENST00000477763 SGSM2O43147 1006 aa6.65□□□□□ -1.34
SMNDC1-205ENST00000477763 EFCAB14O75071 495 aa6.65□□□□□ -1.34
SMNDC1-205ENST00000477763 PFKLP17858 780 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms