RNA–Protein interactions for RNA: ENST00000477693.1

NIFK-205, Transcript of nucleolar protein interacting with the FHA domain of MKI67, humanhuman

TSL 1 (best)

Gene NIFK, Length 1,096 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFK-205ENST00000477693 LRRC41Q15345 812 aa11.26□□□□□ -0.61
NIFK-205ENST00000477693 IQSEC1Q6DN90 963 aa11.26□□□□□ -0.61
NIFK-205ENST00000477693 ZNF713Q8N859 430 aaPredicted RBP11.26□□□□□ -0.61
NIFK-205ENST00000477693 GTF3C6Q969F1 213 aa11.26□□□□□ -0.61
NIFK-205ENST00000477693 LENG1Q96BZ8 264 aaPredicted RBP11.26□□□□□ -0.61
NIFK-205ENST00000477693 TAAR1Q96RJ0 339 aa11.26□□□□□ -0.61
NIFK-205ENST00000477693 IWS1Q96ST2 819 aa11.26□□□□□ -0.61
NIFK-205ENST00000477693 RMDN3Q96TC7 470 aa11.26□□□□□ -0.61
NIFK-205ENST00000477693 PXMP2Q9NR77 195 aa11.26□□□□□ -0.61
NIFK-205ENST00000477693 RBM27Q9P2N5 1060 aaKnown RBP11.26□□□□□ -0.61
NIFK-205ENST00000477693 NAP1L2Q9ULW6 460 aaPredicted RBP11.26□□□□□ -0.61
NIFK-205ENST00000477693 GNEQ9Y223 722 aaKnown RBP11.26□□□□□ -0.61
NIFK-205ENST00000477693 DDX49Q9Y6V7 483 aaKnown RBP11.26□□□□□ -0.61
NIFK-205ENST00000477693 MCM3APO60318 1980 aa11.25□□□□□ -0.61
NIFK-205ENST00000477693 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.25□□□□□ -0.61
NIFK-205ENST00000477693 hCG_1642624A0A1W2PR95 340 aa11.25□□□□□ -0.61
NIFK-205ENST00000477693 RBM47A0AV96 593 aaKnown RBP11.25□□□□□ -0.61
NIFK-205ENST00000477693 KBTBD13C9JR72 458 aa11.25□□□□□ -0.61
NIFK-205ENST00000477693 CPLX1O14810 134 aa11.25□□□□□ -0.61
NIFK-205ENST00000477693 PGK1P00558 417 aa11.25□□□□□ -0.61
NIFK-205ENST00000477693 CST5P28325 142 aaPredicted RBP11.25□□□□□ -0.61
NIFK-205ENST00000477693 HOXA13P31271 388 aaPredicted RBP11.25□□□□□ -0.61
NIFK-205ENST00000477693 ADCYAP1R1P41586 468 aa11.25□□□□□ -0.61
NIFK-205ENST00000477693 GJA9P57773 515 aa11.25□□□□□ -0.61
NIFK-205ENST00000477693 NUCB2P80303 420 aa11.25□□□□□ -0.61
NIFK-205ENST00000477693 TNFAIP2Q03169 654 aa11.25□□□□□ -0.61
NIFK-205ENST00000477693 GJC2Q5T442 439 aaPredicted RBP11.25□□□□□ -0.61
NIFK-205ENST00000477693 ARHGEF16Q5VV41 709 aa11.25□□□□□ -0.61
NIFK-205ENST00000477693 EEPD1Q7L9B9 569 aa11.25□□□□□ -0.61
NIFK-205ENST00000477693 RNF180Q86T96 592 aa11.25□□□□□ -0.61
NIFK-205ENST00000477693 TEX2Q8IWB9 1127 aa11.25□□□□□ -0.61
NIFK-205ENST00000477693 KLHDC9Q8NEP7 349 aa11.25□□□□□ -0.61
NIFK-205ENST00000477693 UPF3AQ9H1J1 476 aaKnown RBP11.25□□□□□ -0.61
NIFK-205ENST00000477693 PDGFCQ9NRA1 345 aa11.25□□□□□ -0.61
NIFK-205ENST00000477693 SMC3Q9UQE7 1217 aa11.25□□□□□ -0.61
NIFK-205ENST00000477693 Q9Y3F1 56 aa11.25□□□□□ -0.61
NIFK-205ENST00000477693 FRMPD4Q14CM0 1322 aa11.25□□□□□ -0.61
NIFK-205ENST00000477693 SYNRGQ9UMZ2 1314 aa11.25□□□□□ -0.61
NIFK-205ENST00000477693 MEIS2O14770 477 aa11.24□□□□□ -0.61
NIFK-205ENST00000477693 SMPD1P17405 629 aa11.24□□□□□ -0.61
NIFK-205ENST00000477693 EIF2AK2P19525 551 aaKnown RBP11.24□□□□□ -0.61
NIFK-205ENST00000477693 STXBP2Q15833 593 aa11.24□□□□□ -0.61
NIFK-205ENST00000477693 NTRK3Q16288 839 aa11.24□□□□□ -0.61
NIFK-205ENST00000477693 DUSP28Q4G0W2 176 aa11.24□□□□□ -0.61
NIFK-205ENST00000477693 WWC2Q6AWC2 1192 aa11.24□□□□□ -0.61
NIFK-205ENST00000477693 CCSAPQ6IQ19 270 aaPredicted RBP11.24□□□□□ -0.61
NIFK-205ENST00000477693 PPP1R18Q6NYC8 613 aa11.24□□□□□ -0.61
NIFK-205ENST00000477693 HEATR3Q7Z4Q2 680 aa11.24□□□□□ -0.61
NIFK-205ENST00000477693 FAM177A1Q8N128 213 aaPredicted RBP11.24□□□□□ -0.61
NIFK-205ENST00000477693 SCFD2Q8WU76 684 aa11.24□□□□□ -0.61
NIFK-205ENST00000477693 WASF1Q92558 559 aa11.24□□□□□ -0.61
NIFK-205ENST00000477693 PDCD2LQ9BRP1 358 aa11.24□□□□□ -0.61
NIFK-205ENST00000477693 TSEN34Q9BSV6 310 aaKnown RBP11.24□□□□□ -0.61
NIFK-205ENST00000477693 PSTPIP2Q9H939 334 aa11.24□□□□□ -0.61
NIFK-205ENST00000477693 SPC25Q9HBM1 224 aa11.24□□□□□ -0.61
NIFK-205ENST00000477693 V9GY48 417 aaPredicted RBP11.24□□□□□ -0.61
NIFK-205ENST00000477693 BAZ2BQ9UIF8 2168 aaKnown RBP11.24□□□□□ -0.61
NIFK-205ENST00000477693 DNAH12Q6ZR08 3092 aa11.23□□□□□ -0.61
NIFK-205ENST00000477693 MOXD2PA6NHM9 499 aa11.23□□□□□ -0.61
NIFK-205ENST00000477693 STXBP3O00186 592 aa11.23□□□□□ -0.61
NIFK-205ENST00000477693 RIOK3O14730 519 aaKnown RBP11.23□□□□□ -0.61
NIFK-205ENST00000477693 NKRFO15226 690 aaKnown RBP eCLIP11.23□□□□□ -0.61
NIFK-205ENST00000477693 CTAGE5O15320 804 aa11.23□□□□□ -0.61
NIFK-205ENST00000477693 PRPF3O43395 683 aaKnown RBP11.23□□□□□ -0.61
NIFK-205ENST00000477693 EIF3JO75822 258 aaKnown RBP11.23□□□□□ -0.61
NIFK-205ENST00000477693 NR3C2P08235 984 aa11.23□□□□□ -0.61
NIFK-205ENST00000477693 IFNAR1P17181 557 aa11.23□□□□□ -0.61
NIFK-205ENST00000477693 SCRN1Q12765 414 aa11.23□□□□□ -0.61
NIFK-205ENST00000477693 PGM5Q15124 567 aa11.23□□□□□ -0.61
NIFK-205ENST00000477693 PFKFB3Q16875 520 aaPredicted RBP11.23□□□□□ -0.61
NIFK-205ENST00000477693 TYW1BQ6NUM6 668 aa11.23□□□□□ -0.61
NIFK-205ENST00000477693 USP17L6PQ6QN14 398 aa11.23□□□□□ -0.61
NIFK-205ENST00000477693 TLK2Q86UE8 772 aa11.23□□□□□ -0.61
NIFK-205ENST00000477693 FCHSD1Q86WN1 690 aa11.23□□□□□ -0.61
NIFK-205ENST00000477693 TRIM22Q8IYM9 498 aa11.23□□□□□ -0.61
NIFK-205ENST00000477693 PCSK9Q8NBP7 692 aaKnown RBP11.23□□□□□ -0.61
NIFK-205ENST00000477693 SLC17A8Q8NDX2 589 aa11.23□□□□□ -0.61
NIFK-205ENST00000477693 GPKOWQ92917 476 aaPredicted RBP eCLIP11.23□□□□□ -0.61
NIFK-205ENST00000477693 CUL5Q93034 780 aa11.23□□□□□ -0.61
NIFK-205ENST00000477693 RNF26Q9BY78 433 aaPredicted RBP11.23□□□□□ -0.61
NIFK-205ENST00000477693 WDR11Q9BZH6 1224 aa11.23□□□□□ -0.61
NIFK-205ENST00000477693 SENP6Q9GZR1 1112 aaPredicted RBP11.23□□□□□ -0.61
NIFK-205ENST00000477693 NCOA5Q9HCD5 579 aaKnown RBP11.23□□□□□ -0.61
NIFK-205ENST00000477693 BARHL2Q9NY43 387 aa11.23□□□□□ -0.61
NIFK-205ENST00000477693 CHMP5Q9NZZ3 219 aa11.23□□□□□ -0.61
NIFK-205ENST00000477693 PHF24Q9UPV7 400 aa11.23□□□□□ -0.61
NIFK-205ENST00000477693 MYADML2A6NDP7 307 aa11.22□□□□□ -0.61
NIFK-205ENST00000477693 C6orf222P0C671 652 aaPredicted RBP11.22□□□□□ -0.61
NIFK-205ENST00000477693 SCG2P13521 617 aa11.22□□□□□ -0.61
NIFK-205ENST00000477693 NAPAP54920 295 aa11.22□□□□□ -0.61
NIFK-205ENST00000477693 CCT2P78371 535 aaKnown RBP11.22□□□□□ -0.61
NIFK-205ENST00000477693 TTLL4Q14679 1199 aa11.22□□□□□ -0.61
NIFK-205ENST00000477693 SNX17Q15036 470 aa11.22□□□□□ -0.61
NIFK-205ENST00000477693 KCNA10Q16322 511 aa11.22□□□□□ -0.61
NIFK-205ENST00000477693 PKN1Q16512 942 aa11.22□□□□□ -0.61
NIFK-205ENST00000477693 LRRC26Q2I0M4 334 aa11.22□□□□□ -0.61
NIFK-205ENST00000477693 TMEM63BQ5T3F8 832 aa11.22□□□□□ -0.61
NIFK-205ENST00000477693 C1orf53Q5VUE5 145 aa11.22□□□□□ -0.61
NIFK-205ENST00000477693 CCDC62Q6P9F0 684 aa11.22□□□□□ -0.61
NIFK-205ENST00000477693 NOL8Q76FK4 1167 aaKnown RBP11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms