RNA–Protein interactions for RNA: ENST00000477477.1

HDLBP-236, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 340 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-236ENST00000477477 NR3C2P08235 984 aa13.22□□□□□ -0.29
HDLBP-236ENST00000477477 CYP21A2P08686 494 aa13.22□□□□□ -0.29
HDLBP-236ENST00000477477 CHMP4BP1P59074 171 aa13.22□□□□□ -0.29
HDLBP-236ENST00000477477 TRDNQ13061 729 aa13.22□□□□□ -0.29
HDLBP-236ENST00000477477 PTGISQ16647 500 aa13.22□□□□□ -0.29
HDLBP-236ENST00000477477 TJAP1Q5JTD0 557 aa13.22□□□□□ -0.29
HDLBP-236ENST00000477477 GDF6Q6KF10 455 aaPredicted RBP13.22□□□□□ -0.29
HDLBP-236ENST00000477477 CHST3Q7LGC8 479 aa13.22□□□□□ -0.29
HDLBP-236ENST00000477477 CAGE1Q8TC20 777 aa13.22□□□□□ -0.29
HDLBP-236ENST00000477477 RUFY2Q8WXA3 655 aa13.22□□□□□ -0.29
HDLBP-236ENST00000477477 PPM1EQ8WY54 764 aa13.22□□□□□ -0.29
HDLBP-236ENST00000477477 KAT2BQ92831 832 aa13.22□□□□□ -0.29
HDLBP-236ENST00000477477 EMID1Q96A84 441 aaPredicted RBP13.22□□□□□ -0.29
HDLBP-236ENST00000477477 CTAGE1Q96RT6 745 aa13.22□□□□□ -0.29
HDLBP-236ENST00000477477 SLC9A7Q96T83 725 aa13.22□□□□□ -0.29
HDLBP-236ENST00000477477 MAP3K20Q9NYL2 800 aaKnown RBP13.22□□□□□ -0.29
HDLBP-236ENST00000477477 DDX41Q9UJV9 622 aaKnown RBP13.22□□□□□ -0.29
HDLBP-236ENST00000477477 MRVI1Q9Y6F6 885 aa13.22□□□□□ -0.29
HDLBP-236ENST00000477477 CASTP20810 708 aaKnown RBP13.21□□□□□ -0.29
HDLBP-236ENST00000477477 IGFBP4P22692 258 aa13.21□□□□□ -0.29
HDLBP-236ENST00000477477 PTH1RQ03431 593 aa13.21□□□□□ -0.29
HDLBP-236ENST00000477477 GRM4Q14833 912 aa13.21□□□□□ -0.29
HDLBP-236ENST00000477477 DGKDQ16760 1214 aa13.21□□□□□ -0.29
HDLBP-236ENST00000477477 SLC35G1Q2M3R5 365 aa13.21□□□□□ -0.29
HDLBP-236ENST00000477477 TMEM67Q5HYA8 995 aa13.21□□□□□ -0.29
HDLBP-236ENST00000477477 CCDC155Q8N6L0 562 aa13.21□□□□□ -0.29
HDLBP-236ENST00000477477 PPTC7Q8NI37 304 aa13.21□□□□□ -0.29
HDLBP-236ENST00000477477 AFAP1L1Q8TED9 768 aa13.21□□□□□ -0.29
HDLBP-236ENST00000477477 PDCD2LQ9BRP1 358 aa13.21□□□□□ -0.29
HDLBP-236ENST00000477477 FTOQ9C0B1 505 aaKnown RBP eCLIP13.21□□□□□ -0.291e-8■□□□□ 8.7
HDLBP-236ENST00000477477 THEGQ9P2T0 379 aa13.21□□□□□ -0.29
HDLBP-236ENST00000477477 PCDHA1Q9Y5I3 950 aa13.21□□□□□ -0.29
HDLBP-236ENST00000477477 U3KPZ7 1027 aaPredicted RBP13.21□□□□□ -0.29
HDLBP-236ENST00000477477 TANC1Q9C0D5 1861 aa13.21□□□□□ -0.3
HDLBP-236ENST00000477477 RGS20O76081 388 aa13.2□□□□□ -0.3
HDLBP-236ENST00000477477 BAIAP3O94812 1187 aa13.2□□□□□ -0.3
HDLBP-236ENST00000477477 F2P00734 622 aa13.2□□□□□ -0.3
HDLBP-236ENST00000477477 CA3P07451 260 aa13.2□□□□□ -0.3
HDLBP-236ENST00000477477 CHMLP26374 656 aa13.2□□□□□ -0.3
HDLBP-236ENST00000477477 RBL2Q08999 1139 aa13.2□□□□□ -0.3
HDLBP-236ENST00000477477 LAMC2Q13753 1193 aa13.2□□□□□ -0.3
HDLBP-236ENST00000477477 STOX1Q6ZVD7 989 aa13.2□□□□□ -0.3
HDLBP-236ENST00000477477 HOMER1Q86YM7 354 aa13.2□□□□□ -0.3
HDLBP-236ENST00000477477 SAMD3Q8N6K7 520 aa13.2□□□□□ -0.3
HDLBP-236ENST00000477477 PHOSPHO2Q8TCD6 241 aa13.2□□□□□ -0.3
HDLBP-236ENST00000477477 ATXN2LQ8WWM7 1075 aaKnown RBP13.2□□□□□ -0.3
HDLBP-236ENST00000477477 DHX38Q92620 1227 aaKnown RBP13.2□□□□□ -0.3
HDLBP-236ENST00000477477 KATNAL1Q9BW62 490 aa13.2□□□□□ -0.3
HDLBP-236ENST00000477477 RIOX1Q9H6W3 641 aa13.2□□□□□ -0.3
HDLBP-236ENST00000477477 GTF2IRD1Q9UHL9 959 aa13.2□□□□□ -0.3
HDLBP-236ENST00000477477 SUPT16HQ9Y5B9 1047 aaKnown RBP13.2□□□□□ -0.3
HDLBP-236ENST00000477477 GBF1Q92538 1859 aa13.19□□□□□ -0.3
HDLBP-236ENST00000477477 HAS3O00219 553 aa13.19□□□□□ -0.3
HDLBP-236ENST00000477477 IFIT3O14879 490 aaKnown RBP13.19□□□□□ -0.3
HDLBP-236ENST00000477477 CYTH3O43739 400 aa13.19□□□□□ -0.3
HDLBP-236ENST00000477477 ZNF286BP0CG31 522 aa13.19□□□□□ -0.3
HDLBP-236ENST00000477477 HOXD8P13378 290 aaPredicted RBP13.19□□□□□ -0.3
HDLBP-236ENST00000477477 SELPP16109 830 aa13.19□□□□□ -0.3
HDLBP-236ENST00000477477 HOXA13P31271 388 aaPredicted RBP13.19□□□□□ -0.3
HDLBP-236ENST00000477477 PSEN2P49810 448 aa13.19□□□□□ -0.3
HDLBP-236ENST00000477477 TRAF1Q13077 416 aa13.19□□□□□ -0.3
HDLBP-236ENST00000477477 GPNMBQ14956 572 aa13.19□□□□□ -0.3
HDLBP-236ENST00000477477 WTAPQ15007 396 aa13.19□□□□□ -0.3
HDLBP-236ENST00000477477 PGM5Q15124 567 aa13.19□□□□□ -0.3
HDLBP-236ENST00000477477 CCDC85BQ15834 202 aaPredicted RBP13.19□□□□□ -0.3
HDLBP-236ENST00000477477 LRRC8DQ7L1W4 858 aa13.19□□□□□ -0.3
HDLBP-236ENST00000477477 RALYLQ86SE5 291 aaKnown RBP13.19□□□□□ -0.3
HDLBP-236ENST00000477477 VSIG10LQ86VR7 867 aa13.19□□□□□ -0.3
HDLBP-236ENST00000477477 HERC6Q8IVU3 1022 aa13.19□□□□□ -0.3
HDLBP-236ENST00000477477 DHX37Q8IY37 1157 aaKnown RBP13.19□□□□□ -0.3
HDLBP-236ENST00000477477 C7orf31Q8N865 590 aa13.19□□□□□ -0.3
HDLBP-236ENST00000477477 IL31RAQ8NI17 732 aa13.19□□□□□ -0.3
HDLBP-236ENST00000477477 PIGSQ96S52 555 aa13.19□□□□□ -0.3
HDLBP-236ENST00000477477 SENP2Q9HC62 589 aa13.19□□□□□ -0.3
HDLBP-236ENST00000477477 HDAC6Q9UBN7 1215 aa13.19□□□□□ -0.3
HDLBP-236ENST00000477477 TAF6LQ9Y6J9 622 aa13.19□□□□□ -0.3
HDLBP-236ENST00000477477 SCN5AQ14524 2016 aa13.18□□□□□ -0.3
HDLBP-236ENST00000477477 ERICH2A1L162 156 aa13.18□□□□□ -0.3
HDLBP-236ENST00000477477 E7EWF7 191 aa13.18□□□□□ -0.3
HDLBP-236ENST00000477477 GCOM1H8Y6P7 765 aaPredicted RBP13.18□□□□□ -0.3
HDLBP-236ENST00000477477 SGSM2O43147 1006 aa13.18□□□□□ -0.3
HDLBP-236ENST00000477477 POLR2MP0CAP2 368 aa13.18□□□□□ -0.3
HDLBP-236ENST00000477477 MYCLP12524 364 aaPredicted RBP13.18□□□□□ -0.3
HDLBP-236ENST00000477477 TROAPQ12815 778 aa13.18□□□□□ -0.3
HDLBP-236ENST00000477477 MFSD10Q14728 455 aa13.18□□□□□ -0.3
HDLBP-236ENST00000477477 SART3Q15020 963 aaKnown RBP13.18□□□□□ -0.3
HDLBP-236ENST00000477477 KCNV1Q6PIU1 500 aa13.18□□□□□ -0.3
HDLBP-236ENST00000477477 NCOA7Q8NI08 942 aa13.18□□□□□ -0.3
HDLBP-236ENST00000477477 ALG1Q9BT22 464 aa13.18□□□□□ -0.3
HDLBP-236ENST00000477477 MUC3AQ02505 3323 aa13.17□□□□□ -0.3
HDLBP-236ENST00000477477 PNMA6FA0A0J9YX94 578 aa13.17□□□□□ -0.3
HDLBP-236ENST00000477477 KIF28PB7ZC32 967 aa13.17□□□□□ -0.3
HDLBP-236ENST00000477477 PPFIA4O75335 1185 aa13.17□□□□□ -0.3
HDLBP-236ENST00000477477 ARHGEF15O94989 841 aa13.17□□□□□ -0.3
HDLBP-236ENST00000477477 PARNO95453 639 aaKnown RBP13.17□□□□□ -0.3
HDLBP-236ENST00000477477 GGPS1O95749 300 aa13.17□□□□□ -0.3
HDLBP-236ENST00000477477 CXCL10P02778 98 aa13.17□□□□□ -0.3
HDLBP-236ENST00000477477 CKBP12277 381 aa13.17□□□□□ -0.3
HDLBP-236ENST00000477477 UBA1P22314 1058 aaKnown RBP13.17□□□□□ -0.3
HDLBP-236ENST00000477477 CCND2P30279 289 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms