RNA–Protein interactions for RNA: ENST00000476625.5

HDAC6-219, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-219ENST00000476625 EIF2AK2P19525 551 aaKnown RBP14.05□□□□□ -0.16
HDAC6-219ENST00000476625 PTPN11Q06124 597 aaPredicted RBP14.05□□□□□ -0.16
HDAC6-219ENST00000476625 TRIM71Q2Q1W2 868 aaKnown RBP14.05□□□□□ -0.16
HDAC6-219ENST00000476625 DNERQ8NFT8 737 aa14.05□□□□□ -0.16
HDAC6-219ENST00000476625 C17orf80Q9BSJ5 609 aa14.05□□□□□ -0.16
HDAC6-219ENST00000476625 ZBED2Q9BTP6 218 aa14.05□□□□□ -0.16
HDAC6-219ENST00000476625 HELLSQ9NRZ9 838 aa14.05□□□□□ -0.16
HDAC6-219ENST00000476625 TCP11L1Q9NUJ3 509 aa14.05□□□□□ -0.16
HDAC6-219ENST00000476625 WDR19Q8NEZ3 1342 aa14.05□□□□□ -0.16
HDAC6-219ENST00000476625 LINC01553A4QN01 128 aa14.04□□□□□ -0.16
HDAC6-219ENST00000476625 BAIAP3O94812 1187 aa14.04□□□□□ -0.16
HDAC6-219ENST00000476625 GH1P01241 217 aa14.04□□□□□ -0.16
HDAC6-219ENST00000476625 IL9P15248 144 aa14.04□□□□□ -0.16
HDAC6-219ENST00000476625 SELPP16109 830 aa14.04□□□□□ -0.16
HDAC6-219ENST00000476625 HOXD11P31277 338 aaPredicted RBP14.04□□□□□ -0.16
HDAC6-219ENST00000476625 PSEN2P49810 448 aa14.04□□□□□ -0.16
HDAC6-219ENST00000476625 PDE1AP54750 535 aa14.04□□□□□ -0.16
HDAC6-219ENST00000476625 QRICH1Q2TAL8 776 aa14.04□□□□□ -0.16
HDAC6-219ENST00000476625 MCMDC2Q4G0Z9 681 aa14.04□□□□□ -0.16
HDAC6-219ENST00000476625 BRDTQ58F21 947 aaPredicted RBP14.04□□□□□ -0.16
HDAC6-219ENST00000476625 ZNF618Q5T7W0 954 aa14.04□□□□□ -0.16
HDAC6-219ENST00000476625 ADGRF4Q8IZF3 695 aa14.04□□□□□ -0.16
HDAC6-219ENST00000476625 AFAP1L1Q8TED9 768 aa14.04□□□□□ -0.16
HDAC6-219ENST00000476625 GPKOWQ92917 476 aaPredicted RBP eCLIP14.04□□□□□ -0.162e-6■■□□□ 12.7
HDAC6-219ENST00000476625 EVI5LQ96CN4 794 aa14.04□□□□□ -0.16
HDAC6-219ENST00000476625 BCAS3Q9H6U6 928 aa14.04□□□□□ -0.16
HDAC6-219ENST00000476625 VAT1LQ9HCJ6 419 aa14.04□□□□□ -0.16
HDAC6-219ENST00000476625 GTF2IRD1Q9UHL9 959 aa14.04□□□□□ -0.16
HDAC6-219ENST00000476625 COG5Q9UP83 839 aa14.04□□□□□ -0.16
HDAC6-219ENST00000476625 LOC102724159A0A0B4J2E5 919 aa14.03□□□□□ -0.16
HDAC6-219ENST00000476625 KIF28PB7ZC32 967 aa14.03□□□□□ -0.16
HDAC6-219ENST00000476625 OPLAHO14841 1288 aa14.03□□□□□ -0.16
HDAC6-219ENST00000476625 KPNA6O60684 536 aa14.03□□□□□ -0.16
HDAC6-219ENST00000476625 CXCL10P02778 98 aa14.03□□□□□ -0.16
HDAC6-219ENST00000476625 MFSD10Q14728 455 aa14.03□□□□□ -0.16
HDAC6-219ENST00000476625 PWP2Q15269 919 aaKnown RBP14.03□□□□□ -0.16
HDAC6-219ENST00000476625 TMEM31Q5JXX7 168 aa14.03□□□□□ -0.16
HDAC6-219ENST00000476625 CNKSR3Q6P9H4 555 aa14.03□□□□□ -0.16
HDAC6-219ENST00000476625 IL31RAQ8NI17 732 aa14.03□□□□□ -0.16
HDAC6-219ENST00000476625 CRBNQ96SW2 442 aa14.03□□□□□ -0.16
HDAC6-219ENST00000476625 DDX41Q9UJV9 622 aaKnown RBP14.03□□□□□ -0.16
HDAC6-219ENST00000476625 TELO2Q9Y4R8 837 aa14.03□□□□□ -0.16
HDAC6-219ENST00000476625 CCDC171Q6TFL3 1326 aa14.03□□□□□ -0.16
HDAC6-219ENST00000476625 B4E1Z4 1266 aa14.02□□□□□ -0.17
HDAC6-219ENST00000476625 PPP1R11O60927 126 aaPredicted RBP14.02□□□□□ -0.17
HDAC6-219ENST00000476625 GJB5O95377 273 aa14.02□□□□□ -0.17
HDAC6-219ENST00000476625 KCNA5P22460 613 aa14.02□□□□□ -0.17
HDAC6-219ENST00000476625 KIAA0753Q2KHM9 967 aa14.02□□□□□ -0.17
HDAC6-219ENST00000476625 MFSD6Q6ZSS7 791 aa14.02□□□□□ -0.17
HDAC6-219ENST00000476625 SESTD1Q86VW0 696 aa14.02□□□□□ -0.17
HDAC6-219ENST00000476625 PNMA1Q8ND90 353 aa14.02□□□□□ -0.17
HDAC6-219ENST00000476625 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.02□□□□□ -0.17
HDAC6-219ENST00000476625 CAGE1Q8TC20 777 aa14.02□□□□□ -0.17
HDAC6-219ENST00000476625 ANKS1AQ92625 1134 aa14.02□□□□□ -0.17
HDAC6-219ENST00000476625 RILPL2Q969X0 211 aa14.02□□□□□ -0.17
HDAC6-219ENST00000476625 RMDN3Q96TC7 470 aa14.02□□□□□ -0.17
HDAC6-219ENST00000476625 UBE2ZQ9H832 354 aaPredicted RBP14.02□□□□□ -0.17
HDAC6-219ENST00000476625 KIAA1671Q9BY89 1806 aa14.01□□□□□ -0.17
HDAC6-219ENST00000476625 ABCB11O95342 1321 aa14.01□□□□□ -0.17
HDAC6-219ENST00000476625 TRIM6-TRIM34B2RNG4 842 aa14.01□□□□□ -0.17
HDAC6-219ENST00000476625 KDM4AO75164 1064 aa14.01□□□□□ -0.17
HDAC6-219ENST00000476625 RGS20O76081 388 aa14.01□□□□□ -0.17
HDAC6-219ENST00000476625 MYCLP12524 364 aaPredicted RBP14.01□□□□□ -0.17
HDAC6-219ENST00000476625 ERVK-21P61565 698 aa14.01□□□□□ -0.17
HDAC6-219ENST00000476625 STAG2Q8N3U4 1231 aa14.01□□□□□ -0.17
HDAC6-219ENST00000476625 CCDC155Q8N6L0 562 aa14.01□□□□□ -0.17
HDAC6-219ENST00000476625 C7orf31Q8N865 590 aa14.01□□□□□ -0.17
HDAC6-219ENST00000476625 LNPKQ9C0E8 428 aa14.01□□□□□ -0.17
HDAC6-219ENST00000476625 JMJD4Q9H9V9 463 aa14.01□□□□□ -0.17
HDAC6-219ENST00000476625 PXMP2Q9NR77 195 aa14.01□□□□□ -0.17
HDAC6-219ENST00000476625 SUPT16HQ9Y5B9 1047 aaKnown RBP14.01□□□□□ -0.17
HDAC6-219ENST00000476625 RALGAPA2Q2PPJ7 1873 aa14.01□□□□□ -0.17
HDAC6-219ENST00000476625 ZMYM6O95789 1325 aa14□□□□□ -0.17
HDAC6-219ENST00000476625 HAS3O00219 553 aa14□□□□□ -0.17
HDAC6-219ENST00000476625 DHX16O60231 1041 aaKnown RBP14□□□□□ -0.17
HDAC6-219ENST00000476625 LGR5O75473 907 aa14□□□□□ -0.17
HDAC6-219ENST00000476625 CFBP00751 764 aa14□□□□□ -0.17
HDAC6-219ENST00000476625 CASTP20810 708 aaKnown RBP14□□□□□ -0.17
HDAC6-219ENST00000476625 HOXA13P31271 388 aaPredicted RBP14□□□□□ -0.17
HDAC6-219ENST00000476625 SP2Q02086 613 aa14□□□□□ -0.17
HDAC6-219ENST00000476625 MKRN4PQ13434 485 aaPredicted RBP14□□□□□ -0.17
HDAC6-219ENST00000476625 STXBP2Q15833 593 aa14□□□□□ -0.17
HDAC6-219ENST00000476625 SLC35G1Q2M3R5 365 aa14□□□□□ -0.17
HDAC6-219ENST00000476625 HSDL1Q3SXM5 330 aa14□□□□□ -0.17
HDAC6-219ENST00000476625 ARHGEF16Q5VV41 709 aa14□□□□□ -0.17
HDAC6-219ENST00000476625 DBF4BQ8NFT6 615 aa14□□□□□ -0.17
HDAC6-219ENST00000476625 NSUN6Q8TEA1 469 aaKnown RBP14□□□□□ -0.17
HDAC6-219ENST00000476625 TGS1Q96RS0 853 aaKnown RBP14□□□□□ -0.17
HDAC6-219ENST00000476625 MPHOSPH6Q99547 160 aaKnown RBP14□□□□□ -0.17
HDAC6-219ENST00000476625 RAD9AQ99638 391 aa14□□□□□ -0.17
HDAC6-219ENST00000476625 HCN4Q9Y3Q4 1203 aa14□□□□□ -0.17
HDAC6-219ENST00000476625 MRVI1Q9Y6F6 885 aa14□□□□□ -0.17
HDAC6-219ENST00000476625 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.99□□□□□ -0.17
HDAC6-219ENST00000476625 H3BQ06 376 aaPredicted RBP13.99□□□□□ -0.17
HDAC6-219ENST00000476625 CSPG5O95196 566 aa13.99□□□□□ -0.17
HDAC6-219ENST00000476625 F2P00734 622 aa13.99□□□□□ -0.17
HDAC6-219ENST00000476625 CTSHP09668 335 aa13.99□□□□□ -0.17
HDAC6-219ENST00000476625 RBL2Q08999 1139 aa13.99□□□□□ -0.17
HDAC6-219ENST00000476625 DGKDQ16760 1214 aa13.99□□□□□ -0.17
HDAC6-219ENST00000476625 MYOCDQ8IZQ8 938 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms