RNA–Protein interactions for RNA: ENST00000476531.1

PGK1-203, Transcript of phosphoglycerate kinase 1, humanhuman

TSL 2

Gene PGK1, Length 960 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1-203ENST00000476531 LARGE1O95461 756 aa12.25□□□□□ -0.45
PGK1-203ENST00000476531 EDNRBP24530 442 aa12.25□□□□□ -0.45
PGK1-203ENST00000476531 RFC2P35250 354 aa12.25□□□□□ -0.45
PGK1-203ENST00000476531 CPT1AP50416 773 aa12.25□□□□□ -0.45
PGK1-203ENST00000476531 EXOSC10Q01780 885 aaKnown RBP12.25□□□□□ -0.45
PGK1-203ENST00000476531 TOB2Q14106 344 aaPredicted RBP12.25□□□□□ -0.45
PGK1-203ENST00000476531 KRT32Q14532 448 aa12.25□□□□□ -0.45
PGK1-203ENST00000476531 NBPF20Q3BBV1 942 aa12.25□□□□□ -0.45
PGK1-203ENST00000476531 TMEM67Q5HYA8 995 aa12.25□□□□□ -0.45
PGK1-203ENST00000476531 RRP12Q5JTH9 1297 aaKnown RBP12.25□□□□□ -0.45
PGK1-203ENST00000476531 BLOC1S2Q6QNY1 142 aa12.25□□□□□ -0.45
PGK1-203ENST00000476531 OR6J1Q8NGC5 347 aa12.25□□□□□ -0.45
PGK1-203ENST00000476531 PPP1R13LQ8WUF5 828 aa12.25□□□□□ -0.45
PGK1-203ENST00000476531 C1QTNF1Q9BXJ1 281 aa12.25□□□□□ -0.45
PGK1-203ENST00000476531 TSPYL2Q9H2G4 693 aaPredicted RBP12.25□□□□□ -0.45
PGK1-203ENST00000476531 CYP46A1Q9Y6A2 500 aa12.25□□□□□ -0.45
PGK1-203ENST00000476531 PTPDC1A2A3K4 754 aa12.24□□□□□ -0.45
PGK1-203ENST00000476531 DTNBO60941 627 aa12.24□□□□□ -0.45
PGK1-203ENST00000476531 CALML3P27482 149 aa12.24□□□□□ -0.45
PGK1-203ENST00000476531 KCNQ1P51787 676 aa12.24□□□□□ -0.45
PGK1-203ENST00000476531 FRMPD2Q68DX3 1309 aaPredicted RBP12.24□□□□□ -0.45
PGK1-203ENST00000476531 KRT40Q6A162 431 aa12.24□□□□□ -0.45
PGK1-203ENST00000476531 NFRKBQ6P4R8 1299 aa12.24□□□□□ -0.45
PGK1-203ENST00000476531 PHOSPHO2Q8TCD6 241 aa12.24□□□□□ -0.45
PGK1-203ENST00000476531 COPS5Q92905 334 aa12.24□□□□□ -0.45
PGK1-203ENST00000476531 SNX21Q969T3 373 aa12.24□□□□□ -0.45
PGK1-203ENST00000476531 SLC9A7Q96T83 725 aa12.24□□□□□ -0.45
PGK1-203ENST00000476531 TMEM47Q9BQJ4 181 aa12.24□□□□□ -0.45
PGK1-203ENST00000476531 CERS4Q9HA82 394 aa12.24□□□□□ -0.45
PGK1-203ENST00000476531 SENP2Q9HC62 589 aa12.24□□□□□ -0.45
PGK1-203ENST00000476531 GPCPD1Q9NPB8 672 aa12.24□□□□□ -0.45
PGK1-203ENST00000476531 SCN10AQ9Y5Y9 1956 aa12.24□□□□□ -0.45
PGK1-203ENST00000476531 SCN5AQ14524 2016 aa12.23□□□□□ -0.45
PGK1-203ENST00000476531 A6NJR5 290 aa12.23□□□□□ -0.45
PGK1-203ENST00000476531 PITPNM1O00562 1244 aa12.23□□□□□ -0.45
PGK1-203ENST00000476531 NKRFO15226 690 aaKnown RBP eCLIP12.23□□□□□ -0.45
PGK1-203ENST00000476531 PRC1O43663 620 aa12.23□□□□□ -0.45
PGK1-203ENST00000476531 KDM4AO75164 1064 aa12.23□□□□□ -0.45
PGK1-203ENST00000476531 IQCF3P0C7M6 154 aa12.23□□□□□ -0.45
PGK1-203ENST00000476531 TOP1P11387 765 aaKnown RBP12.23□□□□□ -0.45
PGK1-203ENST00000476531 ACTN1P12814 892 aa12.23□□□□□ -0.45
PGK1-203ENST00000476531 PSMA5P28066 241 aa12.23□□□□□ -0.45
PGK1-203ENST00000476531 RPS6P62753 249 aaKnown RBP12.23□□□□□ -0.45
PGK1-203ENST00000476531 TAP1Q03518 808 aa12.23□□□□□ -0.45
PGK1-203ENST00000476531 FAM47CQ5HY64 1035 aa12.23□□□□□ -0.45
PGK1-203ENST00000476531 RNF207Q6ZRF8 634 aa12.23□□□□□ -0.45
PGK1-203ENST00000476531 MFSD6Q6ZSS7 791 aa12.23□□□□□ -0.45
PGK1-203ENST00000476531 Q6ZUG5 572 aa12.23□□□□□ -0.45
PGK1-203ENST00000476531 DHX32Q7L7V1 743 aaKnown RBP12.23□□□□□ -0.45
PGK1-203ENST00000476531 HERC6Q8IVU3 1022 aa12.23□□□□□ -0.45
PGK1-203ENST00000476531 NCOA7Q8NI08 942 aa12.23□□□□□ -0.45
PGK1-203ENST00000476531 IPO9Q96P70 1041 aaKnown RBP12.23□□□□□ -0.45
PGK1-203ENST00000476531 ZKSCAN3Q9BRR0 538 aa12.23□□□□□ -0.45
PGK1-203ENST00000476531 TOMM22Q9NS69 142 aa12.23□□□□□ -0.45
PGK1-203ENST00000476531 TCP11L1Q9NUJ3 509 aa12.23□□□□□ -0.45
PGK1-203ENST00000476531 ARIH1Q9Y4X5 557 aaPredicted RBP12.23□□□□□ -0.45
PGK1-203ENST00000476531 PRRC2BQ5JSZ5 2229 aaKnown RBP12.22□□□□□ -0.45
PGK1-203ENST00000476531 WDR19Q8NEZ3 1342 aa12.22□□□□□ -0.45
PGK1-203ENST00000476531 KPNA6O60684 536 aa12.22□□□□□ -0.45
PGK1-203ENST00000476531 ARIH2O95376 493 aa12.22□□□□□ -0.45
PGK1-203ENST00000476531 PDHBP11177 359 aa12.22□□□□□ -0.45
PGK1-203ENST00000476531 PTPN11Q06124 597 aaPredicted RBP12.22□□□□□ -0.45
PGK1-203ENST00000476531 PDE4DQ08499 809 aa12.22□□□□□ -0.45
PGK1-203ENST00000476531 ST3GAL1Q11201 340 aa12.22□□□□□ -0.45
PGK1-203ENST00000476531 PPP2R5BQ15173 497 aa12.22□□□□□ -0.45
PGK1-203ENST00000476531 SKIV2LQ15477 1246 aaKnown RBP12.22□□□□□ -0.45
PGK1-203ENST00000476531 AAK1Q2M2I8 961 aa12.22□□□□□ -0.45
PGK1-203ENST00000476531 SPRED2Q7Z698 418 aa12.22□□□□□ -0.45
PGK1-203ENST00000476531 RALYLQ86SE5 291 aaKnown RBP12.22□□□□□ -0.45
PGK1-203ENST00000476531 HSCBQ8IWL3 235 aa12.22□□□□□ -0.45
PGK1-203ENST00000476531 RETREG2Q8NC44 543 aa12.22□□□□□ -0.45
PGK1-203ENST00000476531 SPRYD3Q8NCJ5 442 aa12.22□□□□□ -0.45
PGK1-203ENST00000476531 SCFD2Q8WU76 684 aa12.22□□□□□ -0.45
PGK1-203ENST00000476531 CTAGE1Q96RT6 745 aa12.22□□□□□ -0.45
PGK1-203ENST00000476531 ZSWIM5Q9P217 1185 aa12.22□□□□□ -0.45
PGK1-203ENST00000476531 TANC1Q9C0D5 1861 aa12.21□□□□□ -0.45
PGK1-203ENST00000476531 GTPBP6O43824 516 aaPredicted RBP12.21□□□□□ -0.45
PGK1-203ENST00000476531 ST18O60284 1047 aa12.21□□□□□ -0.45
PGK1-203ENST00000476531 LPXNO60711 386 aa12.21□□□□□ -0.45
PGK1-203ENST00000476531 SNHG28P0DPA3 235 aa12.21□□□□□ -0.45
PGK1-203ENST00000476531 ZNF543Q08ER8 600 aa12.21□□□□□ -0.45
PGK1-203ENST00000476531 APOBRQ0VD83 1088 aa12.21□□□□□ -0.45
PGK1-203ENST00000476531 BFSP2Q13515 415 aa12.21□□□□□ -0.45
PGK1-203ENST00000476531 GPNMBQ14956 572 aa12.21□□□□□ -0.45
PGK1-203ENST00000476531 BRDTQ58F21 947 aaPredicted RBP12.21□□□□□ -0.45
PGK1-203ENST00000476531 RAB11FIP4Q86YS3 637 aa12.21□□□□□ -0.45
PGK1-203ENST00000476531 DNERQ8NFT8 737 aa12.21□□□□□ -0.45
PGK1-203ENST00000476531 ARNTL2Q8WYA1 636 aa12.21□□□□□ -0.45
PGK1-203ENST00000476531 FTOQ9C0B1 505 aaKnown RBP eCLIP12.21□□□□□ -0.45
PGK1-203ENST00000476531 FOXD4L1Q9NU39 408 aa12.21□□□□□ -0.45
PGK1-203ENST00000476531 PNMA2Q9UL42 364 aa12.21□□□□□ -0.45
PGK1-203ENST00000476531 TPCN1Q9ULQ1 816 aa12.21□□□□□ -0.45
PGK1-203ENST00000476531 COG5Q9UP83 839 aa12.21□□□□□ -0.45
PGK1-203ENST00000476531 TRANK1O15050 2925 aa12.21□□□□□ -0.45
PGK1-203ENST00000476531 TCF20Q9UGU0 1960 aaKnown RBP12.21□□□□□ -0.46
PGK1-203ENST00000476531 K7ELQ4 463 aaPredicted RBP12.2□□□□□ -0.46
PGK1-203ENST00000476531 SH2B2O14492 632 aaPredicted RBP12.2□□□□□ -0.46
PGK1-203ENST00000476531 TLL1O43897 1013 aa12.2□□□□□ -0.46
PGK1-203ENST00000476531 BAIAP3O94812 1187 aa12.2□□□□□ -0.46
PGK1-203ENST00000476531 TXNP10599 105 aaKnown RBP12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms