RNA–Protein interactions for RNA: ENST00000476342.1

HOXB3-208, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 1,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-208ENST00000476342 CRISPLD2Q9H0B8 497 aa33.81■■■■□ 3
HOXB3-208ENST00000476342 PDGFCQ9NRA1 345 aa33.81■■■■□ 3
HOXB3-208ENST00000476342 RBM47A0AV96 593 aaKnown RBP33.8■■■■□ 3
HOXB3-208ENST00000476342 TNFAIP2Q03169 654 aa33.8■■■■□ 3
HOXB3-208ENST00000476342 ANO1Q5XXA6 986 aa33.8■■■■□ 3
HOXB3-208ENST00000476342 BLIDQ8IZY5 108 aa33.8■■■■□ 3
HOXB3-208ENST00000476342 SNX21Q969T3 373 aa33.8■■■■□ 3
HOXB3-208ENST00000476342 KCNJ14Q9UNX9 436 aa33.8■■■■□ 3
HOXB3-208ENST00000476342 KIF3AQ9Y496 699 aa33.8■■■■□ 3
HOXB3-208ENST00000476342 ZSCAN21Q9Y5A6 473 aaPredicted RBP33.8■■■■□ 3
HOXB3-208ENST00000476342 PGBD1Q96JS3 809 aa33.79■■■■□ 3
HOXB3-208ENST00000476342 OGDHLQ9ULD0 1010 aa33.79■■■■□ 3
HOXB3-208ENST00000476342 DUSP11O75319 330 aaKnown RBP33.79■■■■□ 3
HOXB3-208ENST00000476342 TTLL4Q14679 1199 aa33.79■■■■□ 3
HOXB3-208ENST00000476342 GNPTABQ3T906 1256 aa33.79■■■■□ 3
HOXB3-208ENST00000476342 SEPT14Q6ZU15 432 aa33.79■■■■□ 3
HOXB3-208ENST00000476342 WDR11Q9BZH6 1224 aa33.79■■■■□ 3
HOXB3-208ENST00000476342 C11orf97A0A1B0GVM6 126 aaPredicted RBP33.78■■■■□ 3
HOXB3-208ENST00000476342 K7ELQ4 463 aaPredicted RBP33.78■■■■□ 3
HOXB3-208ENST00000476342 MRPS9P82933 396 aaKnown RBP33.78■■■■□ 3
HOXB3-208ENST00000476342 RASGRP4Q8TDF6 673 aa33.78■■■■□ 3
HOXB3-208ENST00000476342 BRMS1Q9HCU9 246 aa33.78■■■■□ 3
HOXB3-208ENST00000476342 XPNPEP3Q9NQH7 507 aa33.78■■■■□ 3
HOXB3-208ENST00000476342 GJB4Q9NTQ9 266 aa33.78■■■■□ 3
HOXB3-208ENST00000476342 EN2P19622 333 aaPredicted RBP33.77■■■■□ 3
HOXB3-208ENST00000476342 SREBF1P36956 1147 aa33.77■■■■□ 3
HOXB3-208ENST00000476342 NPY5RQ15761 445 aa33.77■■■■□ 3
HOXB3-208ENST00000476342 ADAMTS3O15072 1205 aa33.76■■■□□ 2.99
HOXB3-208ENST00000476342 ADCY6O43306 1168 aa33.76■■■□□ 2.99
HOXB3-208ENST00000476342 DUSP28Q4G0W2 176 aa33.76■■■□□ 2.99
HOXB3-208ENST00000476342 KCNV1Q6PIU1 500 aa33.76■■■□□ 2.99
HOXB3-208ENST00000476342 HSCBQ8IWL3 235 aa33.76■■■□□ 2.99
HOXB3-208ENST00000476342 ANKLE1Q8NAG6 615 aa33.76■■■□□ 2.99
HOXB3-208ENST00000476342 LENG1Q96BZ8 264 aaPredicted RBP33.76■■■□□ 2.99
HOXB3-208ENST00000476342 C8orf76Q96K31 380 aa33.76■■■□□ 2.99
HOXB3-208ENST00000476342 SPC25Q9HBM1 224 aa33.76■■■□□ 2.99
HOXB3-208ENST00000476342 NKRFO15226 690 aaKnown RBP eCLIP33.75■■■□□ 2.99
HOXB3-208ENST00000476342 SMPD1P17405 629 aa33.75■■■□□ 2.99
HOXB3-208ENST00000476342 CUL4AQ13619 759 aa33.75■■■□□ 2.99
HOXB3-208ENST00000476342 INPP4AQ96PE3 977 aaPredicted RBP33.75■■■□□ 2.99
HOXB3-208ENST00000476342 GNEQ9Y223 722 aaKnown RBP33.75■■■□□ 2.99
HOXB3-208ENST00000476342 MRVI1Q9Y6F6 885 aa33.75■■■□□ 2.99
HOXB3-208ENST00000476342 TXNP10599 105 aaKnown RBP33.74■■■□□ 2.99
HOXB3-208ENST00000476342 FOSBP53539 338 aa33.74■■■□□ 2.99
HOXB3-208ENST00000476342 KRT40Q6A162 431 aa33.74■■■□□ 2.99
HOXB3-208ENST00000476342 NLRX1Q86UT6 975 aa33.74■■■□□ 2.99
HOXB3-208ENST00000476342 ARRDC4Q8NCT1 418 aa33.74■■■□□ 2.99
HOXB3-208ENST00000476342 ZFP91Q96JP5 570 aaPredicted RBP33.74■■■□□ 2.99
HOXB3-208ENST00000476342 RTEL1Q9NZ71 1219 aa33.74■■■□□ 2.99
HOXB3-208ENST00000476342 SMC3Q9UQE7 1217 aa33.74■■■□□ 2.99
HOXB3-208ENST00000476342 Q9Y3F1 56 aa33.74■■■□□ 2.99
HOXB3-208ENST00000476342 MYH7BA7E2Y1 1941 aa33.74■■■□□ 2.99
HOXB3-208ENST00000476342 M0R2N6 131 aa33.73■■■□□ 2.99
HOXB3-208ENST00000476342 RGS20O76081 388 aa33.73■■■□□ 2.99
HOXB3-208ENST00000476342 MMP1P03956 469 aa33.73■■■□□ 2.99
HOXB3-208ENST00000476342 KRT2P35908 639 aa33.73■■■□□ 2.99
HOXB3-208ENST00000476342 ARHGAP4P98171 946 aa33.73■■■□□ 2.99
HOXB3-208ENST00000476342 TLK2Q86UE8 772 aa33.73■■■□□ 2.99
HOXB3-208ENST00000476342 SYNRGQ9UMZ2 1314 aa33.72■■■□□ 2.99
HOXB3-208ENST00000476342 CAPN15O75808 1086 aa33.72■■■□□ 2.99
HOXB3-208ENST00000476342 RNF180Q86T96 592 aa33.72■■■□□ 2.99
HOXB3-208ENST00000476342 PGK1P00558 417 aa33.71■■■□□ 2.99
HOXB3-208ENST00000476342 TGFB3P10600 412 aa33.71■■■□□ 2.99
HOXB3-208ENST00000476342 GJB2P29033 226 aa33.71■■■□□ 2.99
HOXB3-208ENST00000476342 CCDC62Q6P9F0 684 aa33.71■■■□□ 2.99
HOXB3-208ENST00000476342 KRT25Q7Z3Z0 450 aa33.71■■■□□ 2.99
HOXB3-208ENST00000476342 AP5M1Q9H0R1 490 aa33.71■■■□□ 2.99
HOXB3-208ENST00000476342 FIBPO43427 364 aa33.7■■■□□ 2.99
HOXB3-208ENST00000476342 ARIH2O95376 493 aa33.7■■■□□ 2.99
HOXB3-208ENST00000476342 GJA9P57773 515 aa33.7■■■□□ 2.99
HOXB3-208ENST00000476342 SAFBQ15424 915 aaKnown RBP eCLIP33.7■■■□□ 2.99
HOXB3-208ENST00000476342 GPRASP2Q96D09 838 aa33.7■■■□□ 2.99
HOXB3-208ENST00000476342 CDHR1Q96JP9 859 aa33.7■■■□□ 2.99
HOXB3-208ENST00000476342 UBIAD1Q9Y5Z9 338 aa33.7■■■□□ 2.99
HOXB3-208ENST00000476342 CCDC194A0A1B0GVG4 234 aa33.7■■■□□ 2.98
HOXB3-208ENST00000476342 ADAMTS4O75173 837 aa33.7■■■□□ 2.98
HOXB3-208ENST00000476342 MYCNP04198 464 aaPredicted RBP33.7■■■□□ 2.98
HOXB3-208ENST00000476342 CYP3A4P08684 503 aa33.7■■■□□ 2.98
HOXB3-208ENST00000476342 ICAM3P32942 547 aa33.7■■■□□ 2.98
HOXB3-208ENST00000476342 ZNF76P36508 570 aa33.7■■■□□ 2.98
HOXB3-208ENST00000476342 CRYGNQ8WXF5 182 aa33.7■■■□□ 2.98
HOXB3-208ENST00000476342 UPF3AQ9H1J1 476 aaKnown RBP33.7■■■□□ 2.98
HOXB3-208ENST00000476342 DDX41Q9UJV9 622 aaKnown RBP33.7■■■□□ 2.98
HOXB3-208ENST00000476342 KBTBD13C9JR72 458 aa33.69■■■□□ 2.98
HOXB3-208ENST00000476342 DYNC1LI2O43237 492 aaPredicted RBP33.69■■■□□ 2.98
HOXB3-208ENST00000476342 C6orf222P0C671 652 aaPredicted RBP33.69■■■□□ 2.98
HOXB3-208ENST00000476342 NONOQ15233 471 aaKnown RBP eCLIP33.69■■■□□ 2.983e-6■■■□□ 18.1
HOXB3-208ENST00000476342 LRRC41Q15345 812 aa33.69■■■□□ 2.98
HOXB3-208ENST00000476342 LY6KQ17RY6 165 aa33.69■■■□□ 2.98
HOXB3-208ENST00000476342 TMEM63BQ5T3F8 832 aa33.69■■■□□ 2.98
HOXB3-208ENST00000476342 GJC2Q5T442 439 aaPredicted RBP33.69■■■□□ 2.98
HOXB3-208ENST00000476342 DIS3L2Q8IYB7 885 aaKnown RBP33.69■■■□□ 2.98
HOXB3-208ENST00000476342 FBXO18Q8NFZ0 1043 aa33.69■■■□□ 2.98
HOXB3-208ENST00000476342 DNM1LO00429 736 aa33.68■■■□□ 2.98
HOXB3-208ENST00000476342 FARP2O94887 1054 aaPredicted RBP33.68■■■□□ 2.98
HOXB3-208ENST00000476342 ITGB5P18084 799 aa33.68■■■□□ 2.98
HOXB3-208ENST00000476342 GUCY1B3Q02153 619 aa33.68■■■□□ 2.98
HOXB3-208ENST00000476342 CEP55Q53EZ4 464 aa33.68■■■□□ 2.98
HOXB3-208ENST00000476342 OR6J1Q8NGC5 347 aa33.68■■■□□ 2.98
HOXB3-208ENST00000476342 OXER1Q8TDS5 423 aa33.68■■■□□ 2.98
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms