RNA–Protein interactions for RNA: ENST00000474193.1

CCDC171-206, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 363 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-206ENST00000474193 PPIGQ13427 754 aaKnown RBP eCLIP21.46■■□□□ 1.03
CCDC171-206ENST00000474193 LY6KQ17RY6 165 aa21.46■■□□□ 1.03
CCDC171-206ENST00000474193 MFSD5Q6N075 450 aa21.46■■□□□ 1.03
CCDC171-206ENST00000474193 CCDC62Q6P9F0 684 aa21.46■■□□□ 1.03
CCDC171-206ENST00000474193 MICU3Q86XE3 530 aa21.46■■□□□ 1.03
CCDC171-206ENST00000474193 COPS5Q92905 334 aa21.46■■□□□ 1.03
CCDC171-206ENST00000474193 TBX21Q9UL17 535 aa21.46■■□□□ 1.03
CCDC171-206ENST00000474193 RXRAP19793 462 aa21.45■■□□□ 1.02
CCDC171-206ENST00000474193 PSMC6P62333 389 aa21.45■■□□□ 1.02
CCDC171-206ENST00000474193 LAMC2Q13753 1193 aa21.45■■□□□ 1.02
CCDC171-206ENST00000474193 PGM5Q15124 567 aa21.45■■□□□ 1.02
CCDC171-206ENST00000474193 SHHQ15465 462 aa21.45■■□□□ 1.02
CCDC171-206ENST00000474193 SLC35G1Q2M3R5 365 aa21.45■■□□□ 1.02
CCDC171-206ENST00000474193 GNPTABQ3T906 1256 aa21.45■■□□□ 1.02
CCDC171-206ENST00000474193 FAM47CQ5HY64 1035 aa21.45■■□□□ 1.02
CCDC171-206ENST00000474193 VSIG10LQ86VR7 867 aa21.45■■□□□ 1.02
CCDC171-206ENST00000474193 DHX37Q8IY37 1157 aaKnown RBP21.45■■□□□ 1.02
CCDC171-206ENST00000474193 CCDC82Q8N4S0 544 aa21.45■■□□□ 1.02
CCDC171-206ENST00000474193 SRBD1Q8N5C6 995 aaKnown RBP21.45■■□□□ 1.02
CCDC171-206ENST00000474193 PPP1R12CQ9BZL4 782 aa21.45■■□□□ 1.02
CCDC171-206ENST00000474193 DDX41Q9UJV9 622 aaKnown RBP21.45■■□□□ 1.02
CCDC171-206ENST00000474193 NAP1L2Q9ULW6 460 aaPredicted RBP21.45■■□□□ 1.02
CCDC171-206ENST00000474193 CYP46A1Q9Y6A2 500 aa21.45■■□□□ 1.02
CCDC171-206ENST00000474193 ZBTB43O43298 467 aa21.44■■□□□ 1.02
CCDC171-206ENST00000474193 STAM2O75886 525 aa21.44■■□□□ 1.02
CCDC171-206ENST00000474193 CD4P01730 458 aa21.44■■□□□ 1.02
CCDC171-206ENST00000474193 TGFB3P10600 412 aa21.44■■□□□ 1.02
CCDC171-206ENST00000474193 ITGB8P26012 769 aa21.44■■□□□ 1.02
CCDC171-206ENST00000474193 EXOSC10Q01780 885 aaKnown RBP21.44■■□□□ 1.02
CCDC171-206ENST00000474193 DGKDQ16760 1214 aa21.44■■□□□ 1.02
CCDC171-206ENST00000474193 TM6SF1Q9BZW5 370 aa21.44■■□□□ 1.02
CCDC171-206ENST00000474193 ARIH2O95376 493 aa21.43■■□□□ 1.02
CCDC171-206ENST00000474193 PLEKHA8P1O95397 391 aa21.43■■□□□ 1.02
CCDC171-206ENST00000474193 CHMP4BP1P59074 171 aa21.43■■□□□ 1.02
CCDC171-206ENST00000474193 PTPN11Q06124 597 aaPredicted RBP21.43■■□□□ 1.02
CCDC171-206ENST00000474193 APOA5Q6Q788 366 aa21.43■■□□□ 1.02
CCDC171-206ENST00000474193 CMTR1Q8N1G2 835 aaKnown RBP21.43■■□□□ 1.02
CCDC171-206ENST00000474193 AFG1LQ8WV93 481 aa21.43■■□□□ 1.02
CCDC171-206ENST00000474193 RNPC3Q96LT9 517 aaKnown RBP21.43■■□□□ 1.02
CCDC171-206ENST00000474193 HIPK3Q9H422 1215 aa21.43■■□□□ 1.02
CCDC171-206ENST00000474193 PSTPIP2Q9H939 334 aa21.43■■□□□ 1.02
CCDC171-206ENST00000474193 NOD1Q9Y239 953 aa21.43■■□□□ 1.02
CCDC171-206ENST00000474193 LTBP2Q14767 1821 aa21.43■■□□□ 1.02
CCDC171-206ENST00000474193 RTN1Q16799 776 aa21.42■■□□□ 1.02
CCDC171-206ENST00000474193 NBPF20Q3BBV1 942 aa21.42■■□□□ 1.02
CCDC171-206ENST00000474193 NFRKBQ6P4R8 1299 aa21.42■■□□□ 1.02
CCDC171-206ENST00000474193 TMTC3Q6ZXV5 915 aa21.42■■□□□ 1.02
CCDC171-206ENST00000474193 RUFY3Q7L099 469 aa21.42■■□□□ 1.02
CCDC171-206ENST00000474193 RAB11FIP4Q86YS3 637 aa21.42■■□□□ 1.02
CCDC171-206ENST00000474193 TRPV6Q9H1D0 765 aa21.42■■□□□ 1.02
CCDC171-206ENST00000474193 ALDH8A1Q9H2A2 487 aaPredicted RBP21.42■■□□□ 1.02
CCDC171-206ENST00000474193 MLXIPQ9HAP2 919 aa21.42■■□□□ 1.02
CCDC171-206ENST00000474193 ZSWIM6Q9HCJ5 1215 aa21.42■■□□□ 1.02
CCDC171-206ENST00000474193 RANBP2P49792 3224 aaKnown RBP21.42■■□□□ 1.02
CCDC171-206ENST00000474193 KIAA1217Q5T5P2 1943 aa21.41■■□□□ 1.02
CCDC171-206ENST00000474193 GRIN2DO15399 1336 aa21.41■■□□□ 1.02
CCDC171-206ENST00000474193 CCDC196A0A1B0GTZ2 297 aa21.41■■□□□ 1.02
CCDC171-206ENST00000474193 B4GALT4O60513 344 aa21.41■■□□□ 1.02
CCDC171-206ENST00000474193 RPS6KB1P23443 525 aa21.41■■□□□ 1.02
CCDC171-206ENST00000474193 ARHGAP1Q07960 439 aa21.41■■□□□ 1.02
CCDC171-206ENST00000474193 C9orf50Q5SZB4 431 aa21.41■■□□□ 1.02
CCDC171-206ENST00000474193 XRRA1Q6P2D8 792 aa21.41■■□□□ 1.02
CCDC171-206ENST00000474193 RPUSD2Q8IZ73 545 aaKnown RBP21.41■■□□□ 1.02
CCDC171-206ENST00000474193 DEFB123Q8N688 67 aa21.41■■□□□ 1.02
CCDC171-206ENST00000474193 EMID1Q96A84 441 aaPredicted RBP21.41■■□□□ 1.02
CCDC171-206ENST00000474193 KATNAL1Q9BW62 490 aa21.41■■□□□ 1.02
CCDC171-206ENST00000474193 MTIF3Q9H2K0 278 aaKnown RBP21.41■■□□□ 1.02
CCDC171-206ENST00000474193 EHMT1Q9H9B1 1298 aa21.41■■□□□ 1.02
CCDC171-206ENST00000474193 KLF18A0A0U1RQI7 1052 aa21.4■■□□□ 1.02
CCDC171-206ENST00000474193 GOLGA8AA7E2F4 631 aa21.4■■□□□ 1.02
CCDC171-206ENST00000474193 GOLGA8BA8MQT2 603 aa21.4■■□□□ 1.02
CCDC171-206ENST00000474193 PIK3CDO00329 1044 aa21.4■■□□□ 1.02
CCDC171-206ENST00000474193 MMP3P08254 477 aa21.4■■□□□ 1.02
CCDC171-206ENST00000474193 CYP2C18P33260 490 aa21.4■■□□□ 1.02
CCDC171-206ENST00000474193 RCAN1P53805 252 aa21.4■■□□□ 1.02
CCDC171-206ENST00000474193 PSRC1Q6PGN9 363 aaPredicted RBP21.4■■□□□ 1.02
CCDC171-206ENST00000474193 HEATR3Q7Z4Q2 680 aa21.4■■□□□ 1.02
CCDC171-206ENST00000474193 TCEANC2Q96MN5 208 aa21.4■■□□□ 1.02
CCDC171-206ENST00000474193 SPDYE3A6NKU9 549 aa21.39■■□□□ 1.01
CCDC171-206ENST00000474193 PPFIA4O75335 1185 aa21.39■■□□□ 1.01
CCDC171-206ENST00000474193 CPA1P15085 419 aa21.39■■□□□ 1.01
CCDC171-206ENST00000474193 RBM25P49756 843 aaKnown RBP21.39■■□□□ 1.01
CCDC171-206ENST00000474193 USP17L6PQ6QN14 398 aa21.39■■□□□ 1.01
CCDC171-206ENST00000474193 NLRX1Q86UT6 975 aa21.39■■□□□ 1.01
CCDC171-206ENST00000474193 RETREG2Q8NC44 543 aa21.39■■□□□ 1.01
CCDC171-206ENST00000474193 PPTC7Q8NI37 304 aa21.39■■□□□ 1.01
CCDC171-206ENST00000474193 GGPS1O95749 300 aa21.38■■□□□ 1.01
CCDC171-206ENST00000474193 CSF2RAP15509 400 aa21.38■■□□□ 1.01
CCDC171-206ENST00000474193 COL9A3Q14050 684 aaPredicted RBP21.38■■□□□ 1.01
CCDC171-206ENST00000474193 NEDD9Q14511 834 aa21.38■■□□□ 1.01
CCDC171-206ENST00000474193 CELF3Q5SZQ8 465 aaKnown RBP21.38■■□□□ 1.01
CCDC171-206ENST00000474193 Q6ZUG5 572 aa21.38■■□□□ 1.01
CCDC171-206ENST00000474193 CCDC155Q8N6L0 562 aa21.38■■□□□ 1.01
CCDC171-206ENST00000474193 SPATA33Q96N06 139 aa21.38■■□□□ 1.01
CCDC171-206ENST00000474193 UPF3BQ9BZI7 483 aaKnown RBP21.38■■□□□ 1.01
CCDC171-206ENST00000474193 IL23AQ9NPF7 189 aa21.38■■□□□ 1.01
CCDC171-206ENST00000474193 PDRG1Q9NUG6 133 aa21.38■■□□□ 1.01
CCDC171-206ENST00000474193 HSFX4A0A1B0GTS1 333 aaPredicted RBP21.37■■□□□ 1.01
CCDC171-206ENST00000474193 HSFX3A0A1B0GWH4 333 aaPredicted RBP21.37■■□□□ 1.01
CCDC171-206ENST00000474193 hCG_1642624A0A1W2PR95 340 aa21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms