RNA–Protein interactions for RNA: ENST00000474190.1

CASC3-204, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 908 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-204ENST00000474190 BECN1Q14457 450 aa11.85□□□□□ -0.51
CASC3-204ENST00000474190 PWP2Q15269 919 aaKnown RBP11.85□□□□□ -0.51
CASC3-204ENST00000474190 INF2Q27J81 1249 aa11.85□□□□□ -0.51
CASC3-204ENST00000474190 PCNX4Q63HM2 1172 aa11.85□□□□□ -0.51
CASC3-204ENST00000474190 CCDC62Q6P9F0 684 aa11.85□□□□□ -0.51
CASC3-204ENST00000474190 PIK3AP1Q6ZUJ8 805 aa11.85□□□□□ -0.51
CASC3-204ENST00000474190 NOSTRINQ8IVI9 506 aa11.85□□□□□ -0.51
CASC3-204ENST00000474190 CCAR1Q8IX12 1150 aaKnown RBP11.85□□□□□ -0.51
CASC3-204ENST00000474190 MSL3Q8N5Y2 521 aaKnown RBP11.85□□□□□ -0.51
CASC3-204ENST00000474190 TBCKQ8TEA7 893 aa11.85□□□□□ -0.51
CASC3-204ENST00000474190 IWS1Q96ST2 819 aa11.85□□□□□ -0.51
CASC3-204ENST00000474190 TELO2Q9Y4R8 837 aa11.85□□□□□ -0.51
CASC3-204ENST00000474190 CYP3A7-CYP3A51PA0A087WV96 503 aa11.84□□□□□ -0.51
CASC3-204ENST00000474190 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.84□□□□□ -0.51
CASC3-204ENST00000474190 MEIS1O00470 390 aa11.84□□□□□ -0.51
CASC3-204ENST00000474190 TDP2O95551 362 aa11.84□□□□□ -0.51
CASC3-204ENST00000474190 CYP3A7P24462 503 aa11.84□□□□□ -0.51
CASC3-204ENST00000474190 SP2Q02086 613 aa11.84□□□□□ -0.51
CASC3-204ENST00000474190 NBR1Q14596 966 aa11.84□□□□□ -0.51
CASC3-204ENST00000474190 ARHGEF16Q5VV41 709 aa11.84□□□□□ -0.51
CASC3-204ENST00000474190 FAM173BQ6P4H8 233 aa11.84□□□□□ -0.51
CASC3-204ENST00000474190 KRT25Q7Z3Z0 450 aa11.84□□□□□ -0.51
CASC3-204ENST00000474190 FBXO16Q8IX29 292 aaPredicted RBP11.84□□□□□ -0.51
CASC3-204ENST00000474190 C4orf32Q8N8J7 132 aa11.84□□□□□ -0.51
CASC3-204ENST00000474190 BICD2Q8TD16 824 aa11.84□□□□□ -0.51
CASC3-204ENST00000474190 SH3TC2Q8TF17 1288 aa11.84□□□□□ -0.51
CASC3-204ENST00000474190 CHAMP1Q96JM3 812 aa11.84□□□□□ -0.51
CASC3-204ENST00000474190 CWC22Q9HCG8 908 aaKnown RBP11.84□□□□□ -0.51
CASC3-204ENST00000474190 LRRC37A2A6NM11 1700 aa11.83□□□□□ -0.52
CASC3-204ENST00000474190 MGAMO43451 1857 aa11.83□□□□□ -0.52
CASC3-204ENST00000474190 ASB14A6NK59 587 aa11.83□□□□□ -0.52
CASC3-204ENST00000474190 SPATA31C2B4DYI2 1134 aa11.83□□□□□ -0.52
CASC3-204ENST00000474190 CTAGE5O15320 804 aa11.83□□□□□ -0.52
CASC3-204ENST00000474190 SLC37A4O43826 429 aa11.83□□□□□ -0.52
CASC3-204ENST00000474190 ATP9AO75110 1047 aa11.83□□□□□ -0.52
CASC3-204ENST00000474190 HMGCRP04035 888 aa11.83□□□□□ -0.52
CASC3-204ENST00000474190 XBP1P17861 261 aa11.83□□□□□ -0.52
CASC3-204ENST00000474190 CCND3P30281 292 aaPredicted RBP11.83□□□□□ -0.52
CASC3-204ENST00000474190 GRK4P32298 578 aa11.83□□□□□ -0.52
CASC3-204ENST00000474190 ICAM3P32942 547 aa11.83□□□□□ -0.52
CASC3-204ENST00000474190 IRX5P78411 483 aaPredicted RBP11.83□□□□□ -0.52
CASC3-204ENST00000474190 MTFR1Q15390 333 aa11.83□□□□□ -0.52
CASC3-204ENST00000474190 FBXO46Q6PJ61 603 aaPredicted RBP11.83□□□□□ -0.52
CASC3-204ENST00000474190 EEPD1Q7L9B9 569 aa11.83□□□□□ -0.52
CASC3-204ENST00000474190 FERMT3Q86UX7 667 aa11.83□□□□□ -0.52
CASC3-204ENST00000474190 LENG1Q96BZ8 264 aaPredicted RBP11.83□□□□□ -0.52
CASC3-204ENST00000474190 ARMC5Q96C12 935 aa11.83□□□□□ -0.52
CASC3-204ENST00000474190 WDR11Q9BZH6 1224 aa11.83□□□□□ -0.52
CASC3-204ENST00000474190 RTEL1Q9NZ71 1219 aa11.83□□□□□ -0.52
CASC3-204ENST00000474190 ADD3Q9UEY8 706 aaKnown RBP11.83□□□□□ -0.52
CASC3-204ENST00000474190 SPDYE3A6NKU9 549 aa11.82□□□□□ -0.52
CASC3-204ENST00000474190 DHX15O43143 795 aaKnown RBP11.82□□□□□ -0.52
CASC3-204ENST00000474190 EIF3JO75822 258 aaKnown RBP11.82□□□□□ -0.52
CASC3-204ENST00000474190 INHAP05111 366 aa11.82□□□□□ -0.52
CASC3-204ENST00000474190 ZSCAN22P10073 491 aaPredicted RBP11.82□□□□□ -0.52
CASC3-204ENST00000474190 ARP10275 920 aa11.82□□□□□ -0.52
CASC3-204ENST00000474190 PRKAR2AP13861 404 aaKnown RBP11.82□□□□□ -0.52
CASC3-204ENST00000474190 PDCP20941 246 aa11.82□□□□□ -0.52
CASC3-204ENST00000474190 ANP32AP39687 249 aaKnown RBP11.82□□□□□ -0.52
CASC3-204ENST00000474190 USP11P51784 963 aa11.82□□□□□ -0.52
CASC3-204ENST00000474190 ITGB3BPQ13352 177 aaPredicted RBP11.82□□□□□ -0.52
CASC3-204ENST00000474190 ACVR2BQ13705 512 aa11.82□□□□□ -0.52
CASC3-204ENST00000474190 NONOQ15233 471 aaKnown RBP eCLIP11.82□□□□□ -0.52
CASC3-204ENST00000474190 CEP55Q53EZ4 464 aa11.82□□□□□ -0.52
CASC3-204ENST00000474190 GJC2Q5T442 439 aaPredicted RBP11.82□□□□□ -0.52
CASC3-204ENST00000474190 LHX8Q68G74 356 aa11.82□□□□□ -0.52
CASC3-204ENST00000474190 MCTP2Q6DN12 878 aa11.82□□□□□ -0.52
CASC3-204ENST00000474190 XRRA1Q6P2D8 792 aa11.82□□□□□ -0.52
CASC3-204ENST00000474190 SLAIN1Q8ND83 568 aa11.82□□□□□ -0.52
CASC3-204ENST00000474190 ETNPPLQ8TBG4 499 aa11.82□□□□□ -0.52
CASC3-204ENST00000474190 RAET1EQ8TD07 263 aa11.82□□□□□ -0.52
CASC3-204ENST00000474190 HAS1Q92839 578 aa11.82□□□□□ -0.52
CASC3-204ENST00000474190 GJA10Q969M2 543 aa11.82□□□□□ -0.52
CASC3-204ENST00000474190 ZNF333Q96JL9 665 aa11.82□□□□□ -0.52
CASC3-204ENST00000474190 IPO9Q96P70 1041 aaKnown RBP11.82□□□□□ -0.52
CASC3-204ENST00000474190 MXRA8Q9BRK3 442 aa11.82□□□□□ -0.52
CASC3-204ENST00000474190 FTOQ9C0B1 505 aaKnown RBP eCLIP11.82□□□□□ -0.52
CASC3-204ENST00000474190 TMEM60Q9H2L4 133 aa11.82□□□□□ -0.52
CASC3-204ENST00000474190 JADE2Q9NQC1 790 aa11.82□□□□□ -0.52
CASC3-204ENST00000474190 GNEQ9Y223 722 aaKnown RBP11.82□□□□□ -0.52
CASC3-204ENST00000474190 VPS37CA5D8V6 355 aaPredicted RBP11.81□□□□□ -0.52
CASC3-204ENST00000474190 MYCLP12524 364 aaPredicted RBP11.81□□□□□ -0.52
CASC3-204ENST00000474190 KCNA2P16389 499 aa11.81□□□□□ -0.52
CASC3-204ENST00000474190 SMPD1P17405 629 aa11.81□□□□□ -0.52
CASC3-204ENST00000474190 CCND2P30279 289 aa11.81□□□□□ -0.52
CASC3-204ENST00000474190 ADCYAP1R1P41586 468 aa11.81□□□□□ -0.52
CASC3-204ENST00000474190 TRIM29Q14134 588 aa11.81□□□□□ -0.52
CASC3-204ENST00000474190 ARHGEF6Q15052 776 aa11.81□□□□□ -0.52
CASC3-204ENST00000474190 STXBP2Q15833 593 aa11.81□□□□□ -0.52
CASC3-204ENST00000474190 PKN2Q16513 984 aaKnown RBP11.81□□□□□ -0.52
CASC3-204ENST00000474190 Q4G0T1 1027 aa11.81□□□□□ -0.52
CASC3-204ENST00000474190 MYSM1Q5VVJ2 828 aa11.81□□□□□ -0.52
CASC3-204ENST00000474190 PPP4R3AQ6IN85 833 aa11.81□□□□□ -0.52
CASC3-204ENST00000474190 MOXD1Q6UVY6 613 aa11.81□□□□□ -0.52
CASC3-204ENST00000474190 B3GNT9Q6UX72 402 aa11.81□□□□□ -0.52
CASC3-204ENST00000474190 NIPA1Q7RTP0 329 aa11.81□□□□□ -0.52
CASC3-204ENST00000474190 NEK8Q86SG6 692 aa11.81□□□□□ -0.52
CASC3-204ENST00000474190 TRMT44Q8IYL2 757 aaKnown RBP11.81□□□□□ -0.52
CASC3-204ENST00000474190 COPS5Q92905 334 aa11.81□□□□□ -0.52
CASC3-204ENST00000474190 MTMR9Q96QG7 549 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms