RNA–Protein interactions for RNA: ENST00000474088.1

PKD1-211, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 923 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-211ENST00000474088 KAT2BQ92831 832 aa28.85■■■□□ 2.21
PKD1-211ENST00000474088 MAP3K20Q9NYL2 800 aaKnown RBP28.85■■■□□ 2.21
PKD1-211ENST00000474088 ZBTB5O15062 677 aa28.84■■■□□ 2.21
PKD1-211ENST00000474088 PPP1R11O60927 126 aaPredicted RBP28.84■■■□□ 2.21
PKD1-211ENST00000474088 TRDNQ13061 729 aa28.84■■■□□ 2.21
PKD1-211ENST00000474088 TJAP1Q5JTD0 557 aa28.84■■■□□ 2.21
PKD1-211ENST00000474088 SCN5AQ14524 2016 aa28.83■■■□□ 2.21
PKD1-211ENST00000474088 DGKDQ16760 1214 aa28.83■■■□□ 2.21
PKD1-211ENST00000474088 GDF6Q6KF10 455 aaPredicted RBP28.83■■■□□ 2.21
PKD1-211ENST00000474088 RUFY2Q8WXA3 655 aa28.83■■■□□ 2.21
PKD1-211ENST00000474088 EMID1Q96A84 441 aaPredicted RBP28.83■■■□□ 2.21
PKD1-211ENST00000474088 CTAGE1Q96RT6 745 aa28.83■■■□□ 2.21
PKD1-211ENST00000474088 FTOQ9C0B1 505 aaKnown RBP eCLIP28.83■■■□□ 2.21
PKD1-211ENST00000474088 PCDHA1Q9Y5I3 950 aa28.83■■■□□ 2.21
PKD1-211ENST00000474088 MRVI1Q9Y6F6 885 aa28.83■■■□□ 2.21
PKD1-211ENST00000474088 CYP21A2P08686 494 aa28.82■■■□□ 2.2
PKD1-211ENST00000474088 PTH1RQ03431 593 aa28.82■■■□□ 2.2
PKD1-211ENST00000474088 CCDC85BQ15834 202 aaPredicted RBP28.82■■■□□ 2.2
PKD1-211ENST00000474088 TMEM67Q5HYA8 995 aa28.82■■■□□ 2.2
PKD1-211ENST00000474088 SAMD3Q8N6K7 520 aa28.82■■■□□ 2.2
PKD1-211ENST00000474088 PHOSPHO2Q8TCD6 241 aa28.82■■■□□ 2.2
PKD1-211ENST00000474088 SLC9A7Q96T83 725 aa28.82■■■□□ 2.2
PKD1-211ENST00000474088 SUPT16HQ9Y5B9 1047 aaKnown RBP28.82■■■□□ 2.2
PKD1-211ENST00000474088 U3KPZ7 1027 aaPredicted RBP28.82■■■□□ 2.2
PKD1-211ENST00000474088 MYH6P13533 1939 aa28.82■■■□□ 2.2
PKD1-211ENST00000474088 KIAA1217Q5T5P2 1943 aa28.82■■■□□ 2.2
PKD1-211ENST00000474088 CUL9Q8IWT3 2517 aa28.82■■■□□ 2.2
PKD1-211ENST00000474088 LAMC2Q13753 1193 aa28.81■■■□□ 2.2
PKD1-211ENST00000474088 STOX1Q6ZVD7 989 aa28.81■■■□□ 2.2
PKD1-211ENST00000474088 CCDC155Q8N6L0 562 aa28.81■■■□□ 2.2
PKD1-211ENST00000474088 CAGE1Q8TC20 777 aa28.81■■■□□ 2.2
PKD1-211ENST00000474088 PDCD2LQ9BRP1 358 aa28.81■■■□□ 2.2
PKD1-211ENST00000474088 MYCLP12524 364 aaPredicted RBP28.8■■■□□ 2.2
PKD1-211ENST00000474088 CHMLP26374 656 aa28.8■■■□□ 2.2
PKD1-211ENST00000474088 GRM4Q14833 912 aa28.8■■■□□ 2.2
PKD1-211ENST00000474088 DHX37Q8IY37 1157 aaKnown RBP28.8■■■□□ 2.2
PKD1-211ENST00000474088 AFAP1L1Q8TED9 768 aa28.8■■■□□ 2.2
PKD1-211ENST00000474088 ATXN2LQ8WWM7 1075 aaKnown RBP28.8■■■□□ 2.2
PKD1-211ENST00000474088 RIOX1Q9H6W3 641 aa28.8■■■□□ 2.2
PKD1-211ENST00000474088 PRUNE2Q8WUY3 3088 aa28.79■■■□□ 2.2
PKD1-211ENST00000474088 IFIT3O14879 490 aaKnown RBP28.79■■■□□ 2.2
PKD1-211ENST00000474088 RGS20O76081 388 aa28.79■■■□□ 2.2
PKD1-211ENST00000474088 SLC35G1Q2M3R5 365 aa28.79■■■□□ 2.2
PKD1-211ENST00000474088 PPTC7Q8NI37 304 aa28.79■■■□□ 2.2
PKD1-211ENST00000474088 HDAC6Q9UBN7 1215 aa28.79■■■□□ 2.2
PKD1-211ENST00000474088 GTF2IRD1Q9UHL9 959 aa28.79■■■□□ 2.2
PKD1-211ENST00000474088 CA3P07451 260 aa28.78■■■□□ 2.2
PKD1-211ENST00000474088 HOXA13P31271 388 aaPredicted RBP28.78■■■□□ 2.2
PKD1-211ENST00000474088 PSEN2P49810 448 aa28.78■■■□□ 2.2
PKD1-211ENST00000474088 TRAF1Q13077 416 aa28.78■■■□□ 2.2
PKD1-211ENST00000474088 KCNV1Q6PIU1 500 aa28.78■■■□□ 2.2
PKD1-211ENST00000474088 VSIG10LQ86VR7 867 aa28.78■■■□□ 2.2
PKD1-211ENST00000474088 HOMER1Q86YM7 354 aa28.78■■■□□ 2.2
PKD1-211ENST00000474088 PIGSQ96S52 555 aa28.78■■■□□ 2.2
PKD1-211ENST00000474088 ALG1Q9BT22 464 aa28.78■■■□□ 2.2
PKD1-211ENST00000474088 KATNAL1Q9BW62 490 aa28.78■■■□□ 2.2
PKD1-211ENST00000474088 SENP2Q9HC62 589 aa28.78■■■□□ 2.2
PKD1-211ENST00000474088 THEGQ9P2T0 379 aa28.78■■■□□ 2.2
PKD1-211ENST00000474088 TANC1Q9C0D5 1861 aa28.77■■■□□ 2.2
PKD1-211ENST00000474088 ERICH2A1L162 156 aa28.77■■■□□ 2.2
PKD1-211ENST00000474088 BAIAP3O94812 1187 aa28.77■■■□□ 2.2
PKD1-211ENST00000474088 GPNMBQ14956 572 aa28.77■■■□□ 2.2
PKD1-211ENST00000474088 PGM5Q15124 567 aa28.77■■■□□ 2.2
PKD1-211ENST00000474088 C7orf31Q8N865 590 aa28.77■■■□□ 2.2
PKD1-211ENST00000474088 DHX38Q92620 1227 aaKnown RBP28.77■■■□□ 2.2
PKD1-211ENST00000474088 E7EWF7 191 aa28.76■■■□□ 2.19
PKD1-211ENST00000474088 HAS3O00219 553 aa28.76■■■□□ 2.19
PKD1-211ENST00000474088 SELPP16109 830 aa28.76■■■□□ 2.19
PKD1-211ENST00000474088 MFSD10Q14728 455 aa28.76■■■□□ 2.19
PKD1-211ENST00000474088 WTAPQ15007 396 aa28.76■■■□□ 2.19
PKD1-211ENST00000474088 MYSM1Q5VVJ2 828 aa28.76■■■□□ 2.19
PKD1-211ENST00000474088 RALYLQ86SE5 291 aaKnown RBP28.76■■■□□ 2.19
PKD1-211ENST00000474088 HERC6Q8IVU3 1022 aa28.76■■■□□ 2.19
PKD1-211ENST00000474088 NCOA7Q8NI08 942 aa28.76■■■□□ 2.19
PKD1-211ENST00000474088 TAF6LQ9Y6J9 622 aa28.76■■■□□ 2.19
PKD1-211ENST00000474088 KIF28PB7ZC32 967 aa28.75■■■□□ 2.19
PKD1-211ENST00000474088 GCOM1H8Y6P7 765 aaPredicted RBP28.75■■■□□ 2.19
PKD1-211ENST00000474088 CYTH3O43739 400 aa28.75■■■□□ 2.19
PKD1-211ENST00000474088 PPFIA4O75335 1185 aa28.75■■■□□ 2.19
PKD1-211ENST00000474088 F2P00734 622 aa28.75■■■□□ 2.19
PKD1-211ENST00000474088 POLR2MP0CAP2 368 aa28.75■■■□□ 2.19
PKD1-211ENST00000474088 RBL2Q08999 1139 aa28.75■■■□□ 2.19
PKD1-211ENST00000474088 TROAPQ12815 778 aa28.75■■■□□ 2.19
PKD1-211ENST00000474088 KIAA0753Q2KHM9 967 aa28.75■■■□□ 2.19
PKD1-211ENST00000474088 LRRC8DQ7L1W4 858 aa28.75■■■□□ 2.19
PKD1-211ENST00000474088 ASB2Q96Q27 587 aa28.75■■■□□ 2.19
PKD1-211ENST00000474088 CHD9Q3L8U1 2897 aa28.74■■■□□ 2.19
PKD1-211ENST00000474088 PARNO95453 639 aaKnown RBP28.74■■■□□ 2.19
PKD1-211ENST00000474088 ZNF286BP0CG31 522 aa28.74■■■□□ 2.19
PKD1-211ENST00000474088 CKBP12277 381 aa28.74■■■□□ 2.19
PKD1-211ENST00000474088 HOXD8P13378 290 aaPredicted RBP28.74■■■□□ 2.19
PKD1-211ENST00000474088 SART3Q15020 963 aaKnown RBP28.74■■■□□ 2.19
PKD1-211ENST00000474088 CELF3Q5SZQ8 465 aaKnown RBP28.74■■■□□ 2.19
PKD1-211ENST00000474088 IL31RAQ8NI17 732 aa28.74■■■□□ 2.19
PKD1-211ENST00000474088 PNMA6FA0A0J9YX94 578 aa28.73■■■□□ 2.19
PKD1-211ENST00000474088 RFXAPO00287 272 aa28.73■■■□□ 2.19
PKD1-211ENST00000474088 SGSM2O43147 1006 aa28.73■■■□□ 2.19
PKD1-211ENST00000474088 TGFB3P10600 412 aa28.73■■■□□ 2.19
PKD1-211ENST00000474088 SP2Q02086 613 aa28.73■■■□□ 2.19
PKD1-211ENST00000474088 HSDL1Q3SXM5 330 aa28.73■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms