RNA–Protein interactions for RNA: ENST00000474006.1

CCDC93-207, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-207ENST00000474006 SNRNP48Q6IEG0 339 aaKnown RBP8.71□□□□□ -1.02
CCDC93-207ENST00000474006 FAM160A2Q8N612 972 aaPredicted RBP8.71□□□□□ -1.02
CCDC93-207ENST00000474006 ANKRD13CQ8N6S4 541 aa8.71□□□□□ -1.02
CCDC93-207ENST00000474006 ZNF713Q8N859 430 aaPredicted RBP8.71□□□□□ -1.02
CCDC93-207ENST00000474006 TBC1D5Q92609 795 aa8.71□□□□□ -1.02
CCDC93-207ENST00000474006 TRERF1Q96PN7 1200 aa8.71□□□□□ -1.02
CCDC93-207ENST00000474006 PHF20Q9BVI0 1012 aa8.71□□□□□ -1.02
CCDC93-207ENST00000474006 TEX13BQ9BXU2 312 aa8.71□□□□□ -1.02
CCDC93-207ENST00000474006 SPATC1LQ9H0A9 340 aa8.71□□□□□ -1.02
CCDC93-207ENST00000474006 ZMYND12Q9H0C1 365 aa8.71□□□□□ -1.02
CCDC93-207ENST00000474006 PSTPIP2Q9H939 334 aa8.71□□□□□ -1.02
CCDC93-207ENST00000474006 CPA4Q9UI42 421 aa8.71□□□□□ -1.02
CCDC93-207ENST00000474006 FKBPLQ9UIM3 349 aa8.71□□□□□ -1.02
CCDC93-207ENST00000474006 PNMA2Q9UL42 364 aa8.71□□□□□ -1.02
CCDC93-207ENST00000474006 BTBD18B2RXH4 712 aa8.7□□□□□ -1.02
CCDC93-207ENST00000474006 ADAMTS3O15072 1205 aa8.7□□□□□ -1.02
CCDC93-207ENST00000474006 TLR2O60603 784 aa8.7□□□□□ -1.02
CCDC93-207ENST00000474006 SLC25A27O95847 323 aa8.7□□□□□ -1.02
CCDC93-207ENST00000474006 MMP1P03956 469 aa8.7□□□□□ -1.02
CCDC93-207ENST00000474006 GNA11P29992 359 aa8.7□□□□□ -1.02
CCDC93-207ENST00000474006 MRPL12P52815 198 aaKnown RBP8.7□□□□□ -1.02
CCDC93-207ENST00000474006 COPS2P61201 443 aa8.7□□□□□ -1.02
CCDC93-207ENST00000474006 ERVK-9P63128 1117 aa8.7□□□□□ -1.02
CCDC93-207ENST00000474006 ERVK-24P63145 666 aa8.7□□□□□ -1.02
CCDC93-207ENST00000474006 NR1H3Q13133 447 aa8.7□□□□□ -1.02
CCDC93-207ENST00000474006 CRHR2Q13324 411 aa8.7□□□□□ -1.02
CCDC93-207ENST00000474006 PKP1Q13835 747 aa8.7□□□□□ -1.02
CCDC93-207ENST00000474006 TKFCQ3LXA3 575 aa8.7□□□□□ -1.02
CCDC93-207ENST00000474006 MUM1L1Q5H9M0 696 aa8.7□□□□□ -1.02
CCDC93-207ENST00000474006 FOXD4L5Q5VV16 416 aaPredicted RBP8.7□□□□□ -1.02
CCDC93-207ENST00000474006 MCTP1Q6DN14 999 aa8.7□□□□□ -1.02
CCDC93-207ENST00000474006 GALNT17Q6IS24 598 aa8.7□□□□□ -1.02
CCDC93-207ENST00000474006 C17orf99Q6UX52 265 aa8.7□□□□□ -1.02
CCDC93-207ENST00000474006 NCAPG2Q86XI2 1143 aa8.7□□□□□ -1.02
CCDC93-207ENST00000474006 RIOX2Q8IUF8 465 aa8.7□□□□□ -1.02
CCDC93-207ENST00000474006 DNAJC5GQ8N7S2 189 aa8.7□□□□□ -1.02
CCDC93-207ENST00000474006 RGS22Q8NE09 1264 aa8.7□□□□□ -1.02
CCDC93-207ENST00000474006 CCDC12Q8WUD4 166 aaPredicted RBP8.7□□□□□ -1.02
CCDC93-207ENST00000474006 CLEC4DQ8WXI8 215 aa8.7□□□□□ -1.02
CCDC93-207ENST00000474006 FOXD4L4Q8WXT5 416 aaPredicted RBP8.7□□□□□ -1.02
CCDC93-207ENST00000474006 MOV10L1Q9BXT6 1211 aaKnown RBP8.7□□□□□ -1.02
CCDC93-207ENST00000474006 R3HDMLQ9H3Y0 253 aa8.7□□□□□ -1.02
CCDC93-207ENST00000474006 C6orf50Q9HD87 102 aa8.7□□□□□ -1.02
CCDC93-207ENST00000474006 RIC8AQ9NPQ8 531 aa8.7□□□□□ -1.02
CCDC93-207ENST00000474006 HOMER2Q9NSB8 354 aa8.7□□□□□ -1.02
CCDC93-207ENST00000474006 RNF186Q9NXI6 227 aa8.7□□□□□ -1.02
CCDC93-207ENST00000474006 MORF4L1Q9UBU8 362 aa8.7□□□□□ -1.02
CCDC93-207ENST00000474006 MTMR6Q9Y217 621 aa8.7□□□□□ -1.02
CCDC93-207ENST00000474006 ZDHHC9Q9Y397 364 aa8.7□□□□□ -1.02
CCDC93-207ENST00000474006 ABCB11O95342 1321 aa8.7□□□□□ -1.02
CCDC93-207ENST00000474006 DOCK1Q14185 1865 aa8.69□□□□□ -1.02
CCDC93-207ENST00000474006 ESYT2A0FGR8 921 aa8.69□□□□□ -1.02
CCDC93-207ENST00000474006 VPS37CA5D8V6 355 aaPredicted RBP8.69□□□□□ -1.02
CCDC93-207ENST00000474006 NFIBO00712 420 aa8.69□□□□□ -1.02
CCDC93-207ENST00000474006 OPLAHO14841 1288 aa8.69□□□□□ -1.02
CCDC93-207ENST00000474006 TRPA1O75762 1119 aa8.69□□□□□ -1.02
CCDC93-207ENST00000474006 TBC1D8O95759 1140 aa8.69□□□□□ -1.02
CCDC93-207ENST00000474006 CFBP00751 764 aa8.69□□□□□ -1.02
CCDC93-207ENST00000474006 CCNYL3P0C7X3 344 aa8.69□□□□□ -1.02
CCDC93-207ENST00000474006 ERCC3P19447 782 aa8.69□□□□□ -1.02
CCDC93-207ENST00000474006 CALML3P27482 149 aa8.69□□□□□ -1.02
CCDC93-207ENST00000474006 ADCY7P51828 1080 aa8.69□□□□□ -1.02
CCDC93-207ENST00000474006 SAFBQ15424 915 aaKnown RBP eCLIP8.69□□□□□ -1.02
CCDC93-207ENST00000474006 NPY5RQ15761 445 aa8.69□□□□□ -1.02
CCDC93-207ENST00000474006 PPP1R18Q6NYC8 613 aa8.69□□□□□ -1.02
CCDC93-207ENST00000474006 USP17L6PQ6QN14 398 aa8.69□□□□□ -1.02
CCDC93-207ENST00000474006 MCF2L2Q86YR7 1114 aa8.69□□□□□ -1.02
CCDC93-207ENST00000474006 BLIDQ8IZY5 108 aa8.69□□□□□ -1.02
CCDC93-207ENST00000474006 FAM177A1Q8N128 213 aaPredicted RBP8.69□□□□□ -1.02
CCDC93-207ENST00000474006 CHST13Q8NET6 341 aa8.69□□□□□ -1.02
CCDC93-207ENST00000474006 CCDC148Q8NFR7 591 aa8.69□□□□□ -1.02
CCDC93-207ENST00000474006 BICD2Q8TD16 824 aa8.69□□□□□ -1.02
CCDC93-207ENST00000474006 CUL5Q93034 780 aa8.69□□□□□ -1.02
CCDC93-207ENST00000474006 GLT8D2Q9H1C3 349 aa8.69□□□□□ -1.02
CCDC93-207ENST00000474006 EVA1BQ9NVM1 165 aa8.69□□□□□ -1.02
CCDC93-207ENST00000474006 MAP10Q9P2G4 905 aa8.69□□□□□ -1.02
CCDC93-207ENST00000474006 BIN2Q9UBW5 565 aaPredicted RBP8.69□□□□□ -1.02
CCDC93-207ENST00000474006 PCDHA6Q9UN73 950 aa8.69□□□□□ -1.02
CCDC93-207ENST00000474006 PCDHA4Q9UN74 947 aa8.69□□□□□ -1.02
CCDC93-207ENST00000474006 PCDHA8Q9Y5H6 950 aa8.69□□□□□ -1.02
CCDC93-207ENST00000474006 POTEMA6NI47 508 aa8.68□□□□□ -1.02
CCDC93-207ENST00000474006 GCOM1H8Y6P7 765 aaPredicted RBP8.68□□□□□ -1.02
CCDC93-207ENST00000474006 MEIS2O14770 477 aa8.68□□□□□ -1.02
CCDC93-207ENST00000474006 BRD1O95696 1058 aa8.68□□□□□ -1.02
CCDC93-207ENST00000474006 ADH1BP00325 375 aa8.68□□□□□ -1.02
CCDC93-207ENST00000474006 POLR2MP0CAP2 368 aa8.68□□□□□ -1.02
CCDC93-207ENST00000474006 ZSCAN22P10073 491 aaPredicted RBP8.68□□□□□ -1.02
CCDC93-207ENST00000474006 BCRP11274 1271 aa8.68□□□□□ -1.02
CCDC93-207ENST00000474006 U2AF2P26368 475 aaKnown RBP eCLIP8.68□□□□□ -1.02
CCDC93-207ENST00000474006 HOXA13P31271 388 aaPredicted RBP8.68□□□□□ -1.02
CCDC93-207ENST00000474006 KRT2P35908 639 aa8.68□□□□□ -1.02
CCDC93-207ENST00000474006 CCNA1P78396 465 aa8.68□□□□□ -1.02
CCDC93-207ENST00000474006 NUCB2P80303 420 aa8.68□□□□□ -1.02
CCDC93-207ENST00000474006 NR5A1Q13285 461 aa8.68□□□□□ -1.02
CCDC93-207ENST00000474006 GNL2Q13823 731 aaKnown RBP8.68□□□□□ -1.02
CCDC93-207ENST00000474006 BAATQ14032 418 aaPredicted RBP8.68□□□□□ -1.02
CCDC93-207ENST00000474006 UBE2SQ16763 222 aa8.68□□□□□ -1.02
CCDC93-207ENST00000474006 JAKMIP3Q5VZ66 844 aa8.68□□□□□ -1.02
CCDC93-207ENST00000474006 FERMT3Q86UX7 667 aa8.68□□□□□ -1.02
CCDC93-207ENST00000474006 CCAR1Q8IX12 1150 aaKnown RBP8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms