RNA–Protein interactions for RNA: ENST00000474000.5

COL16A1-210, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 676 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-210ENST00000474000 MMP3P08254 477 aa14□□□□□ -0.17
COL16A1-210ENST00000474000 GSPT1P15170 499 aaKnown RBP14□□□□□ -0.17
COL16A1-210ENST00000474000 EIF2AK2P19525 551 aaKnown RBP14□□□□□ -0.17
COL16A1-210ENST00000474000 CASTP20810 708 aaKnown RBP14□□□□□ -0.17
COL16A1-210ENST00000474000 RFC2P35250 354 aa14□□□□□ -0.17
COL16A1-210ENST00000474000 BFSP2Q13515 415 aa14□□□□□ -0.17
COL16A1-210ENST00000474000 MICALL1Q8N3F8 863 aa14□□□□□ -0.17
COL16A1-210ENST00000474000 KAT2BQ92831 832 aa14□□□□□ -0.17
COL16A1-210ENST00000474000 NECAB3Q96P71 396 aaPredicted RBP14□□□□□ -0.17
COL16A1-210ENST00000474000 PXMP2Q9NR77 195 aa14□□□□□ -0.17
COL16A1-210ENST00000474000 MAD2L2Q9UI95 211 aa14□□□□□ -0.17
COL16A1-210ENST00000474000 NOD1Q9Y239 953 aa14□□□□□ -0.17
COL16A1-210ENST00000474000 SUPT16HQ9Y5B9 1047 aaKnown RBP14□□□□□ -0.17
COL16A1-210ENST00000474000 GBF1Q92538 1859 aa13.99□□□□□ -0.17
COL16A1-210ENST00000474000 PALM3A6NDB9 673 aaPredicted RBP13.99□□□□□ -0.17
COL16A1-210ENST00000474000 ZBTB5O15062 677 aa13.99□□□□□ -0.17
COL16A1-210ENST00000474000 PPP1R11O60927 126 aaPredicted RBP13.99□□□□□ -0.17
COL16A1-210ENST00000474000 ACTN1P12814 892 aa13.99□□□□□ -0.17
COL16A1-210ENST00000474000 BMP1P13497 986 aa13.99□□□□□ -0.17
COL16A1-210ENST00000474000 HSD17B4P51659 736 aa13.99□□□□□ -0.17
COL16A1-210ENST00000474000 TFF2Q03403 129 aa13.99□□□□□ -0.17
COL16A1-210ENST00000474000 TRDNQ13061 729 aa13.99□□□□□ -0.17
COL16A1-210ENST00000474000 PTGISQ16647 500 aa13.99□□□□□ -0.17
COL16A1-210ENST00000474000 TTC22Q5TAA0 569 aa13.99□□□□□ -0.17
COL16A1-210ENST00000474000 IL27Q8NEV9 243 aa13.99□□□□□ -0.17
COL16A1-210ENST00000474000 MTMR8Q96EF0 704 aa13.99□□□□□ -0.17
COL16A1-210ENST00000474000 FTOQ9C0B1 505 aaKnown RBP eCLIP13.99□□□□□ -0.17
COL16A1-210ENST00000474000 PCDHA1Q9Y5I3 950 aa13.99□□□□□ -0.17
COL16A1-210ENST00000474000 CHMLP26374 656 aa13.98□□□□□ -0.17
COL16A1-210ENST00000474000 GHRHRQ02643 423 aa13.98□□□□□ -0.17
COL16A1-210ENST00000474000 PTH1RQ03431 593 aa13.98□□□□□ -0.17
COL16A1-210ENST00000474000 LAMC2Q13753 1193 aa13.98□□□□□ -0.17
COL16A1-210ENST00000474000 DGKDQ16760 1214 aa13.98□□□□□ -0.17
COL16A1-210ENST00000474000 TMEM67Q5HYA8 995 aa13.98□□□□□ -0.17
COL16A1-210ENST00000474000 GDF6Q6KF10 455 aaPredicted RBP13.98□□□□□ -0.17
COL16A1-210ENST00000474000 STOX1Q6ZVD7 989 aa13.98□□□□□ -0.17
COL16A1-210ENST00000474000 SESTD1Q86VW0 696 aa13.98□□□□□ -0.17
COL16A1-210ENST00000474000 PHOSPHO2Q8TCD6 241 aa13.98□□□□□ -0.17
COL16A1-210ENST00000474000 RUFY2Q8WXA3 655 aa13.98□□□□□ -0.17
COL16A1-210ENST00000474000 EMID1Q96A84 441 aaPredicted RBP13.98□□□□□ -0.17
COL16A1-210ENST00000474000 CTAGE1Q96RT6 745 aa13.98□□□□□ -0.17
COL16A1-210ENST00000474000 TSPYL2Q9H2G4 693 aaPredicted RBP13.98□□□□□ -0.17
COL16A1-210ENST00000474000 CERS4Q9HA82 394 aa13.98□□□□□ -0.17
COL16A1-210ENST00000474000 MAP3K20Q9NYL2 800 aaKnown RBP13.98□□□□□ -0.17
COL16A1-210ENST00000474000 MRVI1Q9Y6F6 885 aa13.98□□□□□ -0.17
COL16A1-210ENST00000474000 U3KPZ7 1027 aaPredicted RBP13.98□□□□□ -0.17
COL16A1-210ENST00000474000 REV3LO60673 3130 aa13.98□□□□□ -0.17
COL16A1-210ENST00000474000 LRRC37A2A6NM11 1700 aa13.98□□□□□ -0.17
COL16A1-210ENST00000474000 IFIT3O14879 490 aaKnown RBP13.97□□□□□ -0.17
COL16A1-210ENST00000474000 CYP21A2P08686 494 aa13.97□□□□□ -0.17
COL16A1-210ENST00000474000 MYCLP12524 364 aaPredicted RBP13.97□□□□□ -0.17
COL16A1-210ENST00000474000 HOXA13P31271 388 aaPredicted RBP13.97□□□□□ -0.17
COL16A1-210ENST00000474000 SLC35G1Q2M3R5 365 aa13.97□□□□□ -0.17
COL16A1-210ENST00000474000 DHX37Q8IY37 1157 aaKnown RBP13.97□□□□□ -0.17
COL16A1-210ENST00000474000 SAMD3Q8N6K7 520 aa13.97□□□□□ -0.17
COL16A1-210ENST00000474000 C7orf31Q8N865 590 aa13.97□□□□□ -0.17
COL16A1-210ENST00000474000 PDCD2LQ9BRP1 358 aa13.97□□□□□ -0.17
COL16A1-210ENST00000474000 TCF20Q9UGU0 1960 aaKnown RBP13.96□□□□□ -0.17
COL16A1-210ENST00000474000 LCTP09848 1927 aa13.96□□□□□ -0.17
COL16A1-210ENST00000474000 ERICH2A1L162 156 aa13.96□□□□□ -0.17
COL16A1-210ENST00000474000 RGS20O76081 388 aa13.96□□□□□ -0.17
COL16A1-210ENST00000474000 CA3P07451 260 aa13.96□□□□□ -0.17
COL16A1-210ENST00000474000 GRM4Q14833 912 aa13.96□□□□□ -0.17
COL16A1-210ENST00000474000 GPNMBQ14956 572 aa13.96□□□□□ -0.17
COL16A1-210ENST00000474000 SKIV2LQ15477 1246 aaKnown RBP13.96□□□□□ -0.17
COL16A1-210ENST00000474000 VSIG10LQ86VR7 867 aa13.96□□□□□ -0.17
COL16A1-210ENST00000474000 HOMER1Q86YM7 354 aa13.96□□□□□ -0.17
COL16A1-210ENST00000474000 CCDC155Q8N6L0 562 aa13.96□□□□□ -0.17
COL16A1-210ENST00000474000 PPTC7Q8NI37 304 aa13.96□□□□□ -0.17
COL16A1-210ENST00000474000 CAGE1Q8TC20 777 aa13.96□□□□□ -0.17
COL16A1-210ENST00000474000 AFAP1L1Q8TED9 768 aa13.96□□□□□ -0.17
COL16A1-210ENST00000474000 PIGSQ96S52 555 aa13.96□□□□□ -0.17
COL16A1-210ENST00000474000 ALG1Q9BT22 464 aa13.96□□□□□ -0.17
COL16A1-210ENST00000474000 RIOX1Q9H6W3 641 aa13.96□□□□□ -0.17
COL16A1-210ENST00000474000 SENP2Q9HC62 589 aa13.96□□□□□ -0.17
COL16A1-210ENST00000474000 HDAC6Q9UBN7 1215 aa13.96□□□□□ -0.17
COL16A1-210ENST00000474000 GTF2IRD1Q9UHL9 959 aa13.96□□□□□ -0.17
COL16A1-210ENST00000474000 MTCH2Q9Y6C9 303 aa13.96□□□□□ -0.17
COL16A1-210ENST00000474000 EPOPA6NHQ4 379 aa13.95□□□□□ -0.18
COL16A1-210ENST00000474000 E7EWF7 191 aa13.95□□□□□ -0.18
COL16A1-210ENST00000474000 PPFIA4O75335 1185 aa13.95□□□□□ -0.18
COL16A1-210ENST00000474000 SELPP16109 830 aa13.95□□□□□ -0.18
COL16A1-210ENST00000474000 PSEN2P49810 448 aa13.95□□□□□ -0.18
COL16A1-210ENST00000474000 KCNQ1P51787 676 aa13.95□□□□□ -0.18
COL16A1-210ENST00000474000 TROAPQ12815 778 aa13.95□□□□□ -0.18
COL16A1-210ENST00000474000 TRAF1Q13077 416 aa13.95□□□□□ -0.18
COL16A1-210ENST00000474000 MFSD10Q14728 455 aa13.95□□□□□ -0.18
COL16A1-210ENST00000474000 PGM5Q15124 567 aa13.95□□□□□ -0.18
COL16A1-210ENST00000474000 KIAA0753Q2KHM9 967 aa13.95□□□□□ -0.18
COL16A1-210ENST00000474000 MYSM1Q5VVJ2 828 aa13.95□□□□□ -0.18
COL16A1-210ENST00000474000 KRT40Q6A162 431 aa13.95□□□□□ -0.18
COL16A1-210ENST00000474000 KCNV1Q6PIU1 500 aa13.95□□□□□ -0.18
COL16A1-210ENST00000474000 HERC6Q8IVU3 1022 aa13.95□□□□□ -0.18
COL16A1-210ENST00000474000 NCOA7Q8NI08 942 aa13.95□□□□□ -0.18
COL16A1-210ENST00000474000 DHX38Q92620 1227 aaKnown RBP13.95□□□□□ -0.18
COL16A1-210ENST00000474000 ZFP91Q96JP5 570 aaPredicted RBP13.95□□□□□ -0.18
COL16A1-210ENST00000474000 SLC9A7Q96T83 725 aa13.95□□□□□ -0.18
COL16A1-210ENST00000474000 TAF6LQ9Y6J9 622 aa13.95□□□□□ -0.18
COL16A1-210ENST00000474000 PNMA6FA0A0J9YX94 578 aa13.94□□□□□ -0.18
COL16A1-210ENST00000474000 KIF28PB7ZC32 967 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms