RNA–Protein interactions for RNA: ENST00000473924.1

DDX56-209, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-209ENST00000473924 KIAA0100Q14667 2235 aaKnown RBP14.21□□□□□ -0.14
DDX56-209ENST00000473924 FRMPD4Q14CM0 1322 aa14.2□□□□□ -0.14
DDX56-209ENST00000473924 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.2□□□□□ -0.14
DDX56-209ENST00000473924 DUSP11O75319 330 aaKnown RBP14.2□□□□□ -0.14
DDX56-209ENST00000473924 STAM2O75886 525 aa14.2□□□□□ -0.14
DDX56-209ENST00000473924 TXNP10599 105 aaKnown RBP14.2□□□□□ -0.14
DDX56-209ENST00000473924 FDPSP14324 419 aaKnown RBP14.2□□□□□ -0.14
DDX56-209ENST00000473924 SMPD1P17405 629 aa14.2□□□□□ -0.14
DDX56-209ENST00000473924 CLK2P49760 499 aaKnown RBP14.2□□□□□ -0.14
DDX56-209ENST00000473924 HMGN5P82970 282 aaKnown RBP14.2□□□□□ -0.14
DDX56-209ENST00000473924 TTLL4Q14679 1199 aa14.2□□□□□ -0.14
DDX56-209ENST00000473924 PCNX4Q63HM2 1172 aa14.2□□□□□ -0.14
DDX56-209ENST00000473924 GALNT17Q6IS24 598 aa14.2□□□□□ -0.14
DDX56-209ENST00000473924 XRRA1Q6P2D8 792 aa14.2□□□□□ -0.14
DDX56-209ENST00000473924 ANKLE1Q8NAG6 615 aa14.2□□□□□ -0.14
DDX56-209ENST00000473924 FAM184AQ8NB25 1140 aa14.2□□□□□ -0.14
DDX56-209ENST00000473924 ZFP91Q96JP5 570 aaPredicted RBP14.2□□□□□ -0.14
DDX56-209ENST00000473924 AP5M1Q9H0R1 490 aa14.2□□□□□ -0.14
DDX56-209ENST00000473924 RTEL1Q9NZ71 1219 aa14.2□□□□□ -0.14
DDX56-209ENST00000473924 PCDHA4Q9UN74 947 aa14.2□□□□□ -0.14
DDX56-209ENST00000473924 KCNJ14Q9UNX9 436 aa14.2□□□□□ -0.14
DDX56-209ENST00000473924 MRVI1Q9Y6F6 885 aa14.2□□□□□ -0.14
DDX56-209ENST00000473924 RBM47A0AV96 593 aaKnown RBP14.19□□□□□ -0.14
DDX56-209ENST00000473924 KBTBD13C9JR72 458 aa14.19□□□□□ -0.14
DDX56-209ENST00000473924 FARP2O94887 1054 aaPredicted RBP14.19□□□□□ -0.14
DDX56-209ENST00000473924 PGK1P00558 417 aa14.19□□□□□ -0.14
DDX56-209ENST00000473924 FOSBP53539 338 aa14.19□□□□□ -0.14
DDX56-209ENST00000473924 GNPTABQ3T906 1256 aa14.19□□□□□ -0.14
DDX56-209ENST00000473924 DUSP28Q4G0W2 176 aa14.19□□□□□ -0.14
DDX56-209ENST00000473924 RNF180Q86T96 592 aa14.19□□□□□ -0.14
DDX56-209ENST00000473924 BLIDQ8IZY5 108 aa14.19□□□□□ -0.14
DDX56-209ENST00000473924 RASGRP4Q8TDF6 673 aa14.19□□□□□ -0.14
DDX56-209ENST00000473924 BRMS1Q9HCU9 246 aa14.19□□□□□ -0.14
DDX56-209ENST00000473924 FRMPD3Q5JV73 1810 aa14.19□□□□□ -0.14
DDX56-209ENST00000473924 SYNRGQ9UMZ2 1314 aa14.18□□□□□ -0.14
DDX56-209ENST00000473924 NKRFO15226 690 aaKnown RBP eCLIP14.18□□□□□ -0.14
DDX56-209ENST00000473924 DYNC1LI2O43237 492 aaPredicted RBP14.18□□□□□ -0.14
DDX56-209ENST00000473924 ADCY6O43306 1168 aa14.18□□□□□ -0.14
DDX56-209ENST00000473924 C6orf222P0C671 652 aaPredicted RBP14.18□□□□□ -0.14
DDX56-209ENST00000473924 ZNF76P36508 570 aa14.18□□□□□ -0.14
DDX56-209ENST00000473924 MRPS9P82933 396 aaKnown RBP14.18□□□□□ -0.14
DDX56-209ENST00000473924 LRRC41Q15345 812 aa14.18□□□□□ -0.14
DDX56-209ENST00000473924 GJC2Q5T442 439 aaPredicted RBP14.18□□□□□ -0.14
DDX56-209ENST00000473924 KCNV1Q6PIU1 500 aa14.18□□□□□ -0.14
DDX56-209ENST00000473924 TLK2Q86UE8 772 aa14.18□□□□□ -0.14
DDX56-209ENST00000473924 NLRX1Q86UT6 975 aa14.18□□□□□ -0.14
DDX56-209ENST00000473924 PHF20Q9BVI0 1012 aa14.18□□□□□ -0.14
DDX56-209ENST00000473924 GJB4Q9NTQ9 266 aa14.18□□□□□ -0.14
DDX56-209ENST00000473924 GNEQ9Y223 722 aaKnown RBP14.18□□□□□ -0.14
DDX56-209ENST00000473924 KIF3AQ9Y496 699 aa14.18□□□□□ -0.14
DDX56-209ENST00000473924 DNM1LO00429 736 aa14.17□□□□□ -0.14
DDX56-209ENST00000473924 ADAMTS3O15072 1205 aa14.17□□□□□ -0.14
DDX56-209ENST00000473924 SREBF1P36956 1147 aa14.17□□□□□ -0.14
DDX56-209ENST00000473924 ARHGAP4P98171 946 aa14.17□□□□□ -0.14
DDX56-209ENST00000473924 LY6KQ17RY6 165 aa14.17□□□□□ -0.14
DDX56-209ENST00000473924 TMEM63BQ5T3F8 832 aa14.17□□□□□ -0.14
DDX56-209ENST00000473924 DAGLBQ8NCG7 672 aa14.17□□□□□ -0.14
DDX56-209ENST00000473924 OR6J1Q8NGC5 347 aa14.17□□□□□ -0.14
DDX56-209ENST00000473924 PAWRQ96IZ0 340 aaKnown RBP14.17□□□□□ -0.14
DDX56-209ENST00000473924 C8orf76Q96K31 380 aa14.17□□□□□ -0.14
DDX56-209ENST00000473924 INPP4AQ96PE3 977 aaPredicted RBP14.17□□□□□ -0.14
DDX56-209ENST00000473924 Q9Y3F1 56 aa14.17□□□□□ -0.14
DDX56-209ENST00000473924 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.17□□□□□ -0.14
DDX56-209ENST00000473924 KIAA1217Q5T5P2 1943 aa14.17□□□□□ -0.14
DDX56-209ENST00000473924 FIBPO43427 364 aa14.16□□□□□ -0.14
DDX56-209ENST00000473924 ADAMTS4O75173 837 aa14.16□□□□□ -0.14
DDX56-209ENST00000473924 RGS20O76081 388 aa14.16□□□□□ -0.14
DDX56-209ENST00000473924 ARIH2O95376 493 aa14.16□□□□□ -0.14
DDX56-209ENST00000473924 TGFB3P10600 412 aa14.16□□□□□ -0.14
DDX56-209ENST00000473924 KRT2P35908 639 aa14.16□□□□□ -0.14
DDX56-209ENST00000473924 GJA9P57773 515 aa14.16□□□□□ -0.14
DDX56-209ENST00000473924 GNASQ5JWF2 1037 aa14.16□□□□□ -0.14
DDX56-209ENST00000473924 KRT40Q6A162 431 aa14.16□□□□□ -0.14
DDX56-209ENST00000473924 CCDC62Q6P9F0 684 aa14.16□□□□□ -0.14
DDX56-209ENST00000473924 NECAB2Q7Z6G3 386 aa14.16□□□□□ -0.14
DDX56-209ENST00000473924 DIS3LQ8TF46 1054 aaKnown RBP14.16□□□□□ -0.14
DDX56-209ENST00000473924 COPS5Q92905 334 aa14.16□□□□□ -0.14
DDX56-209ENST00000473924 CDHR1Q96JP9 859 aa14.16□□□□□ -0.14
DDX56-209ENST00000473924 UPF3AQ9H1J1 476 aaKnown RBP14.16□□□□□ -0.14
DDX56-209ENST00000473924 C11orf49Q9H6J7 331 aa14.16□□□□□ -0.14
DDX56-209ENST00000473924 DDX41Q9UJV9 622 aaKnown RBP14.16□□□□□ -0.14
DDX56-209ENST00000473924 SMC3Q9UQE7 1217 aa14.16□□□□□ -0.14
DDX56-209ENST00000473924 CCDC194A0A1B0GVG4 234 aa14.15□□□□□ -0.14
DDX56-209ENST00000473924 K7ELQ4 463 aaPredicted RBP14.15□□□□□ -0.14
DDX56-209ENST00000473924 ZEB2O60315 1214 aa14.15□□□□□ -0.14
DDX56-209ENST00000473924 GH1P01241 217 aa14.15□□□□□ -0.14
DDX56-209ENST00000473924 MMP1P03956 469 aa14.15□□□□□ -0.14
DDX56-209ENST00000473924 PTGS1P23219 599 aa14.15□□□□□ -0.14
DDX56-209ENST00000473924 CPT1AP50416 773 aa14.15□□□□□ -0.14
DDX56-209ENST00000473924 BEX3Q00994 111 aa14.15□□□□□ -0.14
DDX56-209ENST00000473924 GUCY1B3Q02153 619 aa14.15□□□□□ -0.14
DDX56-209ENST00000473924 MTMR1Q13613 665 aa14.15□□□□□ -0.14
DDX56-209ENST00000473924 NONOQ15233 471 aaKnown RBP eCLIP14.15□□□□□ -0.14
DDX56-209ENST00000473924 SAFBQ15424 915 aaKnown RBP eCLIP14.15□□□□□ -0.14
DDX56-209ENST00000473924 FSCN1Q16658 493 aaKnown RBP14.15□□□□□ -0.14
DDX56-209ENST00000473924 BRDTQ58F21 947 aaPredicted RBP14.15□□□□□ -0.14
DDX56-209ENST00000473924 KRT25Q7Z3Z0 450 aa14.15□□□□□ -0.14
DDX56-209ENST00000473924 HSCBQ8IWL3 235 aa14.15□□□□□ -0.14
DDX56-209ENST00000473924 DHX37Q8IY37 1157 aaKnown RBP14.15□□□□□ -0.14
DDX56-209ENST00000473924 PCSK9Q8NBP7 692 aaKnown RBP14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms