RNA–Protein interactions for RNA: ENST00000472928.5

HDAC1-205, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-205ENST00000472928 STARD7Q9NQZ5 370 aa7.46□□□□□ -1.22
HDAC1-205ENST00000472928 HOXC10Q9NYD6 342 aa7.46□□□□□ -1.22
HDAC1-205ENST00000472928 HCN4Q9Y3Q4 1203 aa7.46□□□□□ -1.22
HDAC1-205ENST00000472928 CYP46A1Q9Y6A2 500 aa7.46□□□□□ -1.22
HDAC1-205ENST00000472928 ZNFX1Q9P2E3 1918 aaKnown RBP7.46□□□□□ -1.22
HDAC1-205ENST00000472928 SYNRGQ9UMZ2 1314 aa7.46□□□□□ -1.22
HDAC1-205ENST00000472928 SPTBN4Q9H254 2564 aa7.45□□□□□ -1.22
HDAC1-205ENST00000472928 TCHHQ07283 1943 aa7.45□□□□□ -1.22
HDAC1-205ENST00000472928 GREB1LQ9C091 1923 aaPredicted RBP7.45□□□□□ -1.22
HDAC1-205ENST00000472928 PATL2C9JE40 543 aaKnown RBP7.45□□□□□ -1.22
HDAC1-205ENST00000472928 E7EWF7 191 aa7.45□□□□□ -1.22
HDAC1-205ENST00000472928 TLL1O43897 1013 aa7.45□□□□□ -1.22
HDAC1-205ENST00000472928 FCER1AP12319 257 aa7.45□□□□□ -1.22
HDAC1-205ENST00000472928 AKR1A1P14550 325 aa7.45□□□□□ -1.22
HDAC1-205ENST00000472928 RFX1P22670 979 aa7.45□□□□□ -1.22
HDAC1-205ENST00000472928 RPS6KB1P23443 525 aa7.45□□□□□ -1.22
HDAC1-205ENST00000472928 CTHP32929 405 aa7.45□□□□□ -1.22
HDAC1-205ENST00000472928 PLCD1P51178 756 aa7.45□□□□□ -1.22
HDAC1-205ENST00000472928 GABPAQ06546 454 aa7.45□□□□□ -1.22
HDAC1-205ENST00000472928 COL9A3Q14050 684 aaPredicted RBP7.45□□□□□ -1.22
HDAC1-205ENST00000472928 PLS1Q14651 629 aa7.45□□□□□ -1.22
HDAC1-205ENST00000472928 TMEM132BQ14DG7 1078 aa7.45□□□□□ -1.22
HDAC1-205ENST00000472928 ALX1Q15699 326 aa7.45□□□□□ -1.22
HDAC1-205ENST00000472928 RAB30Q15771 203 aa7.45□□□□□ -1.22
HDAC1-205ENST00000472928 KCNA10Q16322 511 aa7.45□□□□□ -1.22
HDAC1-205ENST00000472928 TSGA10IPQ3SY00 556 aa7.45□□□□□ -1.22
HDAC1-205ENST00000472928 TMEM31Q5JXX7 168 aa7.45□□□□□ -1.22
HDAC1-205ENST00000472928 PSRC1Q6PGN9 363 aaPredicted RBP7.45□□□□□ -1.22
HDAC1-205ENST00000472928 NYAP1Q6ZVC0 841 aa7.45□□□□□ -1.22
HDAC1-205ENST00000472928 RUFY3Q7L099 469 aa7.45□□□□□ -1.22
HDAC1-205ENST00000472928 IFNL3Q8IZI9 196 aa7.45□□□□□ -1.22
HDAC1-205ENST00000472928 MB21D1Q8N884 522 aa7.45□□□□□ -1.22
HDAC1-205ENST00000472928 HERVK_113Q902F9 699 aa7.45□□□□□ -1.22
HDAC1-205ENST00000472928 KCTD12Q96CX2 325 aaKnown RBP7.45□□□□□ -1.22
HDAC1-205ENST00000472928 TCEANC2Q96MN5 208 aa7.45□□□□□ -1.22
HDAC1-205ENST00000472928 TTC14Q96N46 770 aa7.45□□□□□ -1.22
HDAC1-205ENST00000472928 TANGO6Q9C0B7 1094 aa7.45□□□□□ -1.22
HDAC1-205ENST00000472928 PDRG1Q9NUG6 133 aa7.45□□□□□ -1.22
HDAC1-205ENST00000472928 EVA1BQ9NVM1 165 aa7.45□□□□□ -1.22
HDAC1-205ENST00000472928 MSRAQ9UJ68 235 aa7.45□□□□□ -1.22
HDAC1-205ENST00000472928 NEDD4P46934 1319 aa7.45□□□□□ -1.22
HDAC1-205ENST00000472928 GBF1Q92538 1859 aa7.45□□□□□ -1.22
HDAC1-205ENST00000472928 ZNF213O14771 459 aa7.44□□□□□ -1.22
HDAC1-205ENST00000472928 HSP90AA1P07900 732 aaKnown RBP7.44□□□□□ -1.22
HDAC1-205ENST00000472928 MYOGP15173 224 aa7.44□□□□□ -1.22
HDAC1-205ENST00000472928 CST5P28325 142 aaPredicted RBP7.44□□□□□ -1.22
HDAC1-205ENST00000472928 USP5P45974 858 aa7.44□□□□□ -1.22
HDAC1-205ENST00000472928 MCM2P49736 904 aa7.44□□□□□ -1.22
HDAC1-205ENST00000472928 AK2P54819 239 aa7.44□□□□□ -1.22
HDAC1-205ENST00000472928 KCNH2Q12809 1159 aa7.44□□□□□ -1.22
HDAC1-205ENST00000472928 CCDC174Q6PII3 467 aa7.44□□□□□ -1.22
HDAC1-205ENST00000472928 RALYLQ86SE5 291 aaKnown RBP7.44□□□□□ -1.22
HDAC1-205ENST00000472928 TTC6Q86TZ1 520 aa7.44□□□□□ -1.22
HDAC1-205ENST00000472928 CERS3Q8IU89 383 aa7.44□□□□□ -1.22
HDAC1-205ENST00000472928 CLEC10AQ8IUN9 316 aa7.44□□□□□ -1.22
HDAC1-205ENST00000472928 SIAH1Q8IUQ4 282 aa7.44□□□□□ -1.22
HDAC1-205ENST00000472928 FAM126BQ8IXS8 530 aa7.44□□□□□ -1.22
HDAC1-205ENST00000472928 TMEM199Q8N511 208 aa7.44□□□□□ -1.22
HDAC1-205ENST00000472928 NUP133Q8WUM0 1156 aa7.44□□□□□ -1.22
HDAC1-205ENST00000472928 VWCEQ96DN2 955 aa7.44□□□□□ -1.22
HDAC1-205ENST00000472928 NEK1Q96PY6 1258 aa7.44□□□□□ -1.22
HDAC1-205ENST00000472928 MMP19Q99542 508 aa7.44□□□□□ -1.22
HDAC1-205ENST00000472928 SLKQ9H2G2 1235 aaPredicted RBP7.44□□□□□ -1.22
HDAC1-205ENST00000472928 SLC28A3Q9HAS3 691 aa7.44□□□□□ -1.22
HDAC1-205ENST00000472928 CABP5Q9NP86 173 aa7.44□□□□□ -1.22
HDAC1-205ENST00000472928 IL23AQ9NPF7 189 aa7.44□□□□□ -1.22
HDAC1-205ENST00000472928 TFIP11Q9UBB9 837 aaKnown RBP7.44□□□□□ -1.22
HDAC1-205ENST00000472928 DIS3Q9Y2L1 958 aaKnown RBP7.44□□□□□ -1.22
HDAC1-205ENST00000472928 ELP1O95163 1332 aa7.44□□□□□ -1.22
HDAC1-205ENST00000472928 WDFY4Q6ZS81 3184 aa7.44□□□□□ -1.22
HDAC1-205ENST00000472928 ZNF318Q5VUA4 2279 aa7.44□□□□□ -1.22
HDAC1-205ENST00000472928 PTPRZ1P23471 2315 aaPredicted RBP7.44□□□□□ -1.22
HDAC1-205ENST00000472928 PARP14Q460N5 1801 aa7.43□□□□□ -1.22
HDAC1-205ENST00000472928 BAZ2BQ9UIF8 2168 aaKnown RBP7.43□□□□□ -1.22
HDAC1-205ENST00000472928 CYP2D7A0A087X1C5 515 aa7.43□□□□□ -1.22
HDAC1-205ENST00000472928 FAM86C2PA6NEL3 165 aa7.43□□□□□ -1.22
HDAC1-205ENST00000472928 EPOPA6NHQ4 379 aa7.43□□□□□ -1.22
HDAC1-205ENST00000472928 POTEMA6NI47 508 aa7.43□□□□□ -1.22
HDAC1-205ENST00000472928 ARVCFO00192 962 aa7.43□□□□□ -1.22
HDAC1-205ENST00000472928 CTAGE5O15320 804 aa7.43□□□□□ -1.22
HDAC1-205ENST00000472928 ADCY6O43306 1168 aa7.43□□□□□ -1.22
HDAC1-205ENST00000472928 FLOT1O75955 427 aa7.43□□□□□ -1.22
HDAC1-205ENST00000472928 SLC25A27O95847 323 aa7.43□□□□□ -1.22
HDAC1-205ENST00000472928 SNAI1O95863 264 aaPredicted RBP7.43□□□□□ -1.22
HDAC1-205ENST00000472928 ADH1BP00325 375 aa7.43□□□□□ -1.22
HDAC1-205ENST00000472928 CD4P01730 458 aa7.43□□□□□ -1.22
HDAC1-205ENST00000472928 HMGB1P09429 215 aaKnown RBP7.43□□□□□ -1.22
HDAC1-205ENST00000472928 POU3F3P20264 500 aaPredicted RBP7.43□□□□□ -1.22
HDAC1-205ENST00000472928 CYP2C18P33260 490 aa7.43□□□□□ -1.22
HDAC1-205ENST00000472928 RABGGTBP53611 331 aa7.43□□□□□ -1.22
HDAC1-205ENST00000472928 FGD1P98174 961 aa7.43□□□□□ -1.22
HDAC1-205ENST00000472928 PPARAQ07869 468 aa7.43□□□□□ -1.22
HDAC1-205ENST00000472928 TRDNQ13061 729 aa7.43□□□□□ -1.22
HDAC1-205ENST00000472928 AAK1Q2M2I8 961 aa7.43□□□□□ -1.22
HDAC1-205ENST00000472928 GIMAP6Q6P9H5 292 aa7.43□□□□□ -1.22
HDAC1-205ENST00000472928 ALYREFQ86V81 257 aaKnown RBP7.43□□□□□ -1.22
HDAC1-205ENST00000472928 RIOX2Q8IUF8 465 aa7.43□□□□□ -1.22
HDAC1-205ENST00000472928 MB21D2Q8IYB1 491 aaPredicted RBP7.43□□□□□ -1.22
HDAC1-205ENST00000472928 SPICE1Q8N0Z3 855 aa7.43□□□□□ -1.22
HDAC1-205ENST00000472928 STK11IPQ8N1F8 1099 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms